RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 FAM83GA6ND36 823 aa11.92□□□□□ -0.5
PAX6-273ENST00000640610 DDX11L8A8MPP1 907 aa11.92□□□□□ -0.5
PAX6-273ENST00000640610 TRAK2O60296 914 aa11.92□□□□□ -0.5
PAX6-273ENST00000640610 PHF8Q9UPP1 1060 aa11.92□□□□□ -0.5
PAX6-273ENST00000640610 LTBP4Q8N2S1 1624 aa11.92□□□□□ -0.5
PAX6-273ENST00000640610 C1orf167Q5SNV9 1468 aa11.92□□□□□ -0.5
PAX6-273ENST00000640610 USP6P35125 1406 aa11.92□□□□□ -0.5
PAX6-273ENST00000640610 MST1RQ04912 1400 aa11.92□□□□□ -0.5
PAX6-273ENST00000640610 ESPNB1AK53 854 aa11.92□□□□□ -0.5
PAX6-273ENST00000640610 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
PAX6-273ENST00000640610 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
PAX6-273ENST00000640610 DCTN1Q14203 1278 aa11.91□□□□□ -0.5
PAX6-273ENST00000640610 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
PAX6-273ENST00000640610 GZF1Q9H116 711 aaPredicted RBP11.91□□□□□ -0.5
PAX6-273ENST00000640610 GRPEL1Q9HAV7 217 aa11.91□□□□□ -0.5
PAX6-273ENST00000640610 TPM2P07951 284 aa11.9□□□□□ -0.5
PAX6-273ENST00000640610 DDX19BQ9UMR2 479 aa11.9□□□□□ -0.5
PAX6-273ENST00000640610 COG3Q96JB2 828 aa11.9□□□□□ -0.5
PAX6-273ENST00000640610 ZBTB40Q9NUA8 1239 aa11.9□□□□□ -0.5
PAX6-273ENST00000640610 SSH2Q76I76 1423 aa11.9□□□□□ -0.5
PAX6-273ENST00000640610 TTC21BQ7Z4L5 1316 aa11.9□□□□□ -0.51
PAX6-273ENST00000640610 C1orf115Q9H7X2 142 aa11.89□□□□□ -0.51
PAX6-273ENST00000640610 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
PAX6-273ENST00000640610 AEBP1Q8IUX7 1158 aa11.89□□□□□ -0.51
PAX6-273ENST00000640610 KIF1AQ12756 1690 aa11.88□□□□□ -0.51
PAX6-273ENST00000640610 SOX12O15370 315 aa11.88□□□□□ -0.51
PAX6-273ENST00000640610 VAMP4O75379 141 aa11.88□□□□□ -0.51
PAX6-273ENST00000640610 TRIM44Q96DX7 344 aaPredicted RBP11.88□□□□□ -0.51
PAX6-273ENST00000640610 FOXO3O43524 673 aa11.88□□□□□ -0.51
PAX6-273ENST00000640610 HDAC1Q13547 482 aaPredicted RBP11.88□□□□□ -0.51
PAX6-273ENST00000640610 KIF16BQ96L93 1317 aa11.88□□□□□ -0.51
PAX6-273ENST00000640610 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
PAX6-273ENST00000640610 CDK12Q9NYV4 1490 aaPredicted RBP11.87□□□□□ -0.51
PAX6-273ENST00000640610 PIK3C2AO00443 1686 aa11.87□□□□□ -0.51
PAX6-273ENST00000640610 C8orf58Q8NAV2 365 aa11.87□□□□□ -0.51
PAX6-273ENST00000640610 PSME1Q06323 249 aa11.87□□□□□ -0.51
PAX6-273ENST00000640610 ALDH1L2Q3SY69 923 aa11.87□□□□□ -0.51
PAX6-273ENST00000640610 MRPL50Q8N5N7 158 aaKnown RBP11.87□□□□□ -0.51
PAX6-273ENST00000640610 XPCQ01831 940 aaPredicted RBP11.86□□□□□ -0.51
PAX6-273ENST00000640610 SLAIN2Q9P270 581 aa11.86□□□□□ -0.51
PAX6-273ENST00000640610 AATKQ6ZMQ8 1374 aa11.86□□□□□ -0.51
PAX6-273ENST00000640610 IPO8O15397 1037 aaKnown RBP11.86□□□□□ -0.51
PAX6-273ENST00000640610 PTMSP20962 102 aa11.86□□□□□ -0.51
PAX6-273ENST00000640610 KRT24Q2M2I5 525 aa11.86□□□□□ -0.51
PAX6-273ENST00000640610 SMC5Q8IY18 1101 aa11.86□□□□□ -0.51
PAX6-273ENST00000640610 C22orf23Q9BZE7 217 aa11.86□□□□□ -0.51
PAX6-273ENST00000640610 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
PAX6-273ENST00000640610 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
PAX6-273ENST00000640610 MFAP1P55081 439 aaKnown RBP11.85□□□□□ -0.51
PAX6-273ENST00000640610 HSCBQ8IWL3 235 aa11.85□□□□□ -0.51
PAX6-273ENST00000640610 DDX17Q92841 729 aaKnown RBP11.85□□□□□ -0.51
PAX6-273ENST00000640610 PDCL3Q9H2J4 239 aa11.85□□□□□ -0.51
PAX6-273ENST00000640610 TTC21AQ8NDW8 1320 aa11.85□□□□□ -0.51
PAX6-273ENST00000640610 MARF1Q9Y4F3 1742 aaKnown RBP11.85□□□□□ -0.51
PAX6-273ENST00000640610 EIF4A2Q14240 407 aaKnown RBP11.85□□□□□ -0.51
PAX6-273ENST00000640610 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
PAX6-273ENST00000640610 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
PAX6-273ENST00000640610 ERBB4Q15303 1308 aa11.85□□□□□ -0.51
PAX6-273ENST00000640610 TRPM3Q9HCF6 1732 aaPredicted RBP11.84□□□□□ -0.51
PAX6-273ENST00000640610 TWISTNBQ3B726 338 aaPredicted RBP11.84□□□□□ -0.51
PAX6-273ENST00000640610 DLG5Q8TDM6 1919 aa11.84□□□□□ -0.51
PAX6-273ENST00000640610 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
PAX6-273ENST00000640610 GNAI1P63096 354 aa11.84□□□□□ -0.51
PAX6-273ENST00000640610 SULT6B1Q6IMI4 303 aa11.84□□□□□ -0.51
PAX6-273ENST00000640610 BRINP3Q76B58 766 aa11.84□□□□□ -0.51
PAX6-273ENST00000640610 SKOR2Q2VWA4 1001 aaPredicted RBP11.83□□□□□ -0.52
PAX6-273ENST00000640610 HSP90AB2PQ58FF8 381 aa11.83□□□□□ -0.52
PAX6-273ENST00000640610 OVOS2A0A0J9YW53 1432 aa11.83□□□□□ -0.52
PAX6-273ENST00000640610 OVOS2Q6IE36 1432 aa11.83□□□□□ -0.52
PAX6-273ENST00000640610 NUTM2GQ5VZR2 741 aa11.83□□□□□ -0.52
PAX6-273ENST00000640610 KRT28Q7Z3Y7 464 aa11.83□□□□□ -0.52
PAX6-273ENST00000640610 MCM10Q7L590 875 aa11.82□□□□□ -0.52
PAX6-273ENST00000640610 ABTB2Q8N961 1025 aa11.82□□□□□ -0.52
PAX6-273ENST00000640610 CFAP44Q96MT7 982 aa11.82□□□□□ -0.52
PAX6-273ENST00000640610 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
PAX6-273ENST00000640610 NUCB1Q02818 461 aa11.82□□□□□ -0.52
PAX6-273ENST00000640610 SIRT2Q8IXJ6 389 aa11.82□□□□□ -0.52
PAX6-273ENST00000640610 GBP4Q96PP9 640 aa11.82□□□□□ -0.52
PAX6-273ENST00000640610 BRPF1P55201 1214 aaPredicted RBP11.81□□□□□ -0.52
PAX6-273ENST00000640610 USP54Q70EL1 1684 aa11.81□□□□□ -0.52
PAX6-273ENST00000640610 USP31Q70CQ4 1352 aa11.81□□□□□ -0.52
PAX6-273ENST00000640610 NLRP6P59044 892 aa11.81□□□□□ -0.52
PAX6-273ENST00000640610 DDIT3P35638 169 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 ALS2Q96Q42 1657 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 NPHP3Q7Z494 1330 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 CALD1Q05682 793 aaKnown RBP11.8□□□□□ -0.52
PAX6-273ENST00000640610 CCDC173Q0VFZ6 552 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 ANKRD45Q5TZF3 282 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 CHD1LQ86WJ1 897 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 PXDNQ92626 1479 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 PEAK1Q9H792 1746 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 ABCC4O15439 1325 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 SNX21Q969T3 373 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 MIS18AQ9NYP9 233 aa11.8□□□□□ -0.52
PAX6-273ENST00000640610 TERF1P54274 439 aa11.79□□□□□ -0.52
PAX6-273ENST00000640610 ROBO1Q9Y6N7 1651 aa11.79□□□□□ -0.52
PAX6-273ENST00000640610 LMOD2Q6P5Q4 547 aa11.79□□□□□ -0.52
PAX6-273ENST00000640610 ZNF428Q96B54 188 aa11.79□□□□□ -0.52
PAX6-273ENST00000640610 NHSL1Q5SYE7 1610 aa11.78□□□□□ -0.52
PAX6-273ENST00000640610 LMOD3Q0VAK6 560 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms