RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, human

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-222	ENST00000639482	EIF4A2	Q14240	407 aa	Known RBP	12.42	□□□□□ -0.42
SPIN3-222	ENST00000639482	RNF214	Q8ND24	703 aa		12.42	□□□□□ -0.42
SPIN3-222	ENST00000639482	RBM27	Q9P2N5	1060 aa	Known RBP	12.42	□□□□□ -0.42
SPIN3-222	ENST00000639482	RAB3GAP1	Q15042	981 aa		12.42	□□□□□ -0.42
SPIN3-222	ENST00000639482	FAM13B	Q9NYF5	915 aa		12.42	□□□□□ -0.42
SPIN3-222	ENST00000639482	FER1L4	A9Z1Z3	1794 aa		12.42	□□□□□ -0.42
SPIN3-222	ENST00000639482	NLRP6	P59044	892 aa		12.42	□□□□□ -0.42
SPIN3-222	ENST00000639482	LMOD2	Q6P5Q4	547 aa		12.42	□□□□□ -0.42
SPIN3-222	ENST00000639482	MCM10	Q7L590	875 aa		12.42	□□□□□ -0.42
SPIN3-222	ENST00000639482	SMARCA5	O60264	1052 aa	Predicted RBP	12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	FCHSD2	O94868	740 aa		12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	FAM135B	Q49AJ0	1406 aa		12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	CALD1	Q05682	793 aa	Known RBP	12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	TBX22	Q9Y458	520 aa		12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	PNPLA6	Q8IY17	1366 aa		12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	PRPF40A	O75400	957 aa	Known RBP	12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	RBM25	P49756	843 aa	Known RBP	12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	LRRC7	Q96NW7	1537 aa		12.41	□□□□□ -0.42
SPIN3-222	ENST00000639482	KIF2C	Q99661	725 aa		12.4	□□□□□ -0.42
SPIN3-222	ENST00000639482	BAG4	O95429	457 aa	Known RBP	12.4	□□□□□ -0.42
SPIN3-222	ENST00000639482	TECPR2	O15040	1411 aa		12.4	□□□□□ -0.42
SPIN3-222	ENST00000639482	KIF20B	Q96Q89	1820 aa		12.4	□□□□□ -0.42
SPIN3-222	ENST00000639482	BMP2KL	Q5H9B9	411 aa		12.39	□□□□□ -0.43
SPIN3-222	ENST00000639482	USHBP1	Q8N6Y0	703 aa		12.39	□□□□□ -0.43
SPIN3-222	ENST00000639482	ZGPAT	Q8N5A5	531 aa	Known RBP	12.39	□□□□□ -0.43
SPIN3-222	ENST00000639482	MAP3K19	Q56UN5	1328 aa		12.39	□□□□□ -0.43
SPIN3-222	ENST00000639482	NFE2L2	Q16236	605 aa		12.39	□□□□□ -0.43
SPIN3-222	ENST00000639482	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.39	□□□□□ -0.43
SPIN3-222	ENST00000639482	RGPD8	O14715	1765 aa	Predicted RBP	12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	ABTB2	Q8N961	1025 aa		12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	ANKLE2	Q86XL3	938 aa		12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	RRP9	O43818	475 aa	Known RBP	12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	CDC45	O75419	566 aa		12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	AMPH	P49418	695 aa		12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	ESCO1	Q5FWF5	840 aa		12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	TSHZ3	Q63HK5	1081 aa		12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	SIRT2	Q8IXJ6	389 aa		12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	SNX21	Q969T3	373 aa		12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	RIMS1	Q86UR5	1692 aa	Known RBP	12.38	□□□□□ -0.43
SPIN3-222	ENST00000639482	ZBTB7B	O15156	539 aa	Predicted RBP	12.37	□□□□□ -0.43
SPIN3-222	ENST00000639482	MBIP	Q9NS73	344 aa		12.37	□□□□□ -0.43
SPIN3-222	ENST00000639482	CDC42BPG	Q6DT37	1551 aa		12.37	□□□□□ -0.43
SPIN3-222	ENST00000639482	PLEKHG3	A1L390	1219 aa		12.37	□□□□□ -0.43
SPIN3-222	ENST00000639482	C8orf58	Q8NAV2	365 aa		12.37	□□□□□ -0.43
SPIN3-222	ENST00000639482	SIRT1	Q96EB6	747 aa		12.37	□□□□□ -0.43
SPIN3-222	ENST00000639482	USP6	P35125	1406 aa		12.37	□□□□□ -0.43
SPIN3-222	ENST00000639482	TWISTNB	Q3B726	338 aa	Predicted RBP	12.37	□□□□□ -0.43
SPIN3-222	ENST00000639482	SLC4A10	Q6U841	1118 aa		12.37	□□□□□ -0.43
SPIN3-222	ENST00000639482	ORAI2	Q96SN7	254 aa		12.37	□□□□□ -0.43
SPIN3-222	ENST00000639482	CT47B1	P0C2W7	299 aa	Predicted RBP	12.36	□□□□□ -0.43
SPIN3-222	ENST00000639482	DDX17	Q92841	729 aa	Known RBP	12.36	□□□□□ -0.43
SPIN3-222	ENST00000639482	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.36	□□□□□ -0.43
SPIN3-222	ENST00000639482	GSPT1	P15170	499 aa	Known RBP	12.36	□□□□□ -0.43
SPIN3-222	ENST00000639482	SETD1B	Q9UPS6	1966 aa	Known RBP	12.36	□□□□□ -0.43
SPIN3-222	ENST00000639482	MED14	O60244	1454 aa		12.36	□□□□□ -0.43
SPIN3-222	ENST00000639482	PTMA	P06454	111 aa	Known RBP	12.36	□□□□□ -0.43
SPIN3-222	ENST00000639482	DTNB	O60941	627 aa		12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	VAMP4	O75379	141 aa		12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	PRIM1	P49642	420 aa	Known RBP	12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	HSPA2	P54652	639 aa		12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	CCDC173	Q0VFZ6	552 aa		12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	ZSCAN30	Q86W11	494 aa		12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	SYCE3	A1L190	88 aa		12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	PLCB2	Q00722	1185 aa		12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	NECTIN2	Q92692	538 aa		12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	GCC1	Q96CN9	775 aa		12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	ANKRD26	Q9UPS8	1709 aa		12.35	□□□□□ -0.43
SPIN3-222	ENST00000639482	DDIT3	P35638	169 aa		12.34	□□□□□ -0.43
SPIN3-222	ENST00000639482	RBSN	Q9H1K0	784 aa		12.34	□□□□□ -0.43
SPIN3-222	ENST00000639482	ADGRB2	O60241	1585 aa		12.34	□□□□□ -0.43
SPIN3-222	ENST00000639482	ZSCAN23	Q3MJ62	389 aa		12.34	□□□□□ -0.43
SPIN3-222	ENST00000639482	ARHGAP23	Q9P227	1491 aa		12.33	□□□□□ -0.43
SPIN3-222	ENST00000639482	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.33	□□□□□ -0.44
SPIN3-222	ENST00000639482	MRPL50	Q8N5N7	158 aa	Known RBP	12.33	□□□□□ -0.44
SPIN3-222	ENST00000639482	GDPD2	Q9HCC8	539 aa		12.33	□□□□□ -0.44
SPIN3-222	ENST00000639482	KLHL40	Q2TBA0	621 aa		12.33	□□□□□ -0.44
SPIN3-222	ENST00000639482	EYA1	Q99502	592 aa		12.33	□□□□□ -0.44
SPIN3-222	ENST00000639482	PLEKHM2	Q8IWE5	1019 aa		12.32	□□□□□ -0.44
SPIN3-222	ENST00000639482	SLIT1	O75093	1534 aa		12.32	□□□□□ -0.44
SPIN3-222	ENST00000639482	PSME1	Q06323	249 aa		12.32	□□□□□ -0.44
SPIN3-222	ENST00000639482	MTHFSD	Q2M296	383 aa	Known RBP	12.32	□□□□□ -0.44
SPIN3-222	ENST00000639482	PHF8	Q9UPP1	1060 aa		12.32	□□□□□ -0.44
SPIN3-222	ENST00000639482	NEK4	P51957	841 aa		12.31	□□□□□ -0.44
SPIN3-222	ENST00000639482	ALDH1L2	Q3SY69	923 aa		12.31	□□□□□ -0.44
SPIN3-222	ENST00000639482	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.31	□□□□□ -0.44
SPIN3-222	ENST00000639482	DIP2A	Q14689	1571 aa		12.31	□□□□□ -0.44
SPIN3-222	ENST00000639482	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.31	□□□□□ -0.44
SPIN3-222	ENST00000639482	ITSN1	Q15811	1721 aa		12.31	□□□□□ -0.44
SPIN3-222	ENST00000639482	ISY1	Q9ULR0	285 aa	Known RBP	12.31	□□□□□ -0.44
SPIN3-222	ENST00000639482	VIRMA	Q69YN4	1812 aa	Known RBP	12.31	□□□□□ -0.44
SPIN3-222	ENST00000639482	AATK	Q6ZMQ8	1374 aa		12.31	□□□□□ -0.44
SPIN3-222	ENST00000639482	RABEP1	Q15276	862 aa		12.31	□□□□□ -0.44
SPIN3-222	ENST00000639482	KNDC1	Q76NI1	1749 aa		12.3	□□□□□ -0.44
SPIN3-222	ENST00000639482	OVOS2	A0A0J9YW53	1432 aa		12.3	□□□□□ -0.44
SPIN3-222	ENST00000639482	OVOS2	Q6IE36	1432 aa		12.3	□□□□□ -0.44
SPIN3-222	ENST00000639482	ST18	O60284	1047 aa		12.3	□□□□□ -0.44
SPIN3-222	ENST00000639482	SDS	P20132	328 aa		12.3	□□□□□ -0.44
SPIN3-222	ENST00000639482	CASC1	Q6TDU7	716 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms