RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 TNMDQ9H2S6 317 aa19.86■□□□□ 0.77
SCARB2-210ENST00000638567 NAT10Q9H0A0 1025 aaKnown RBP19.86■□□□□ 0.77
SCARB2-210ENST00000638567 PLCH2O75038 1416 aa19.85■□□□□ 0.77
SCARB2-210ENST00000638567 DUOX2Q9NRD8 1548 aa19.85■□□□□ 0.77
SCARB2-210ENST00000638567 FERMT3Q86UX7 667 aa19.85■□□□□ 0.77
SCARB2-210ENST00000638567 TPM1P09493 284 aa19.85■□□□□ 0.77
SCARB2-210ENST00000638567 CASTP20810 708 aaKnown RBP19.85■□□□□ 0.77
SCARB2-210ENST00000638567 RBM42Q9BTD8 480 aaKnown RBP19.85■□□□□ 0.77
SCARB2-210ENST00000638567 KDM4AO75164 1064 aa19.84■□□□□ 0.77
SCARB2-210ENST00000638567 KIF1BPQ96EK5 621 aa19.84■□□□□ 0.77
SCARB2-210ENST00000638567 TSHZ3Q63HK5 1081 aa19.84■□□□□ 0.77
SCARB2-210ENST00000638567 DDX54Q8TDD1 881 aaKnown RBP19.84■□□□□ 0.77
SCARB2-210ENST00000638567 ANKRD1Q15327 319 aa19.84■□□□□ 0.77
SCARB2-210ENST00000638567 SYTL4Q96C24 671 aaPredicted RBP19.84■□□□□ 0.77
SCARB2-210ENST00000638567 LRRFIP2Q9Y608 721 aaKnown RBP19.84■□□□□ 0.77
SCARB2-210ENST00000638567 TRAPPC8Q9Y2L5 1435 aa19.83■□□□□ 0.77
SCARB2-210ENST00000638567 TSR1Q2NL82 804 aaKnown RBP19.83■□□□□ 0.77
SCARB2-210ENST00000638567 TTC22Q5TAA0 569 aa19.83■□□□□ 0.77
SCARB2-210ENST00000638567 GDPD2Q9HCC8 539 aa19.83■□□□□ 0.76
SCARB2-210ENST00000638567 RRP9O43818 475 aaKnown RBP19.83■□□□□ 0.76
SCARB2-210ENST00000638567 MYL6BP14649 208 aa19.83■□□□□ 0.76
SCARB2-210ENST00000638567 ARHGAP45Q92619 1136 aa19.83■□□□□ 0.76
SCARB2-210ENST00000638567 CCDC83Q8IWF9 413 aa19.82■□□□□ 0.76
SCARB2-210ENST00000638567 A2MP01023 1474 aa19.82■□□□□ 0.76
SCARB2-210ENST00000638567 SAFBQ15424 915 aaKnown RBP eCLIP19.82■□□□□ 0.76
SCARB2-210ENST00000638567 HOOK1Q9UJC3 728 aaKnown RBP19.82■□□□□ 0.76
SCARB2-210ENST00000638567 MAGI3Q5TCQ9 1506 aa19.82■□□□□ 0.76
SCARB2-210ENST00000638567 BTBD11A6QL63 1104 aa19.82■□□□□ 0.76
SCARB2-210ENST00000638567 ZSCAN31Q96LW9 406 aaPredicted RBP19.82■□□□□ 0.76
SCARB2-210ENST00000638567 SHANK2Q9UPX8 1470 aa19.81■□□□□ 0.76
SCARB2-210ENST00000638567 KLHL40Q2TBA0 621 aa19.81■□□□□ 0.76
SCARB2-210ENST00000638567 MNS1Q8NEH6 495 aa19.81■□□□□ 0.76
SCARB2-210ENST00000638567 ADAMTS12P58397 1594 aa19.81■□□□□ 0.76
SCARB2-210ENST00000638567 GLRX3O76003 335 aaKnown RBP19.81■□□□□ 0.76
SCARB2-210ENST00000638567 SMC5Q8IY18 1101 aa19.81■□□□□ 0.76
SCARB2-210ENST00000638567 XPCQ01831 940 aaPredicted RBP19.8■□□□□ 0.76
SCARB2-210ENST00000638567 FLIIQ13045 1269 aa19.8■□□□□ 0.76
SCARB2-210ENST00000638567 SPATA32Q96LK8 384 aa19.8■□□□□ 0.76
SCARB2-210ENST00000638567 MEIS3Q99687 375 aa19.8■□□□□ 0.76
SCARB2-210ENST00000638567 LARP6Q9BRS8 491 aaKnown RBP19.8■□□□□ 0.76
SCARB2-210ENST00000638567 STK38Q15208 465 aa19.8■□□□□ 0.76
SCARB2-210ENST00000638567 NUP62CLQ9H1M0 184 aa19.8■□□□□ 0.76
SCARB2-210ENST00000638567 PTPRCP08575 1304 aa19.8■□□□□ 0.76
SCARB2-210ENST00000638567 PRPF40BQ6NWY9 871 aaKnown RBP19.8■□□□□ 0.76
SCARB2-210ENST00000638567 THEMISQ8N1K5 641 aaPredicted RBP19.8■□□□□ 0.76
SCARB2-210ENST00000638567 C8orf58Q8NAV2 365 aa19.8■□□□□ 0.76
SCARB2-210ENST00000638567 SMC2O95347 1197 aa19.79■□□□□ 0.76
SCARB2-210ENST00000638567 SDSP20132 328 aa19.79■□□□□ 0.76
SCARB2-210ENST00000638567 ZBTB40Q9NUA8 1239 aa19.79■□□□□ 0.76
SCARB2-210ENST00000638567 ME1P48163 572 aa19.79■□□□□ 0.76
SCARB2-210ENST00000638567 TAF7Q15545 349 aaPredicted RBP19.79■□□□□ 0.76
SCARB2-210ENST00000638567 RBM27Q9P2N5 1060 aaKnown RBP19.79■□□□□ 0.76
SCARB2-210ENST00000638567 ERICH2A1L162 156 aa19.78■□□□□ 0.76
SCARB2-210ENST00000638567 ATP2B1P20020 1258 aa19.78■□□□□ 0.76
SCARB2-210ENST00000638567 TSPYL6Q8N831 410 aa19.78■□□□□ 0.76
SCARB2-210ENST00000638567 ZNF396Q96N95 335 aaPredicted RBP19.78■□□□□ 0.76
SCARB2-210ENST00000638567 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
SCARB2-210ENST00000638567 ATF3P18847 181 aa19.78■□□□□ 0.76
SCARB2-210ENST00000638567 USHBP1Q8N6Y0 703 aa19.78■□□□□ 0.76
SCARB2-210ENST00000638567 DISP1Q96F81 1524 aa19.78■□□□□ 0.76
SCARB2-210ENST00000638567 CLSTN1O94985 981 aa19.77■□□□□ 0.76
SCARB2-210ENST00000638567 ADGRL2O95490 1459 aa19.77■□□□□ 0.76
SCARB2-210ENST00000638567 RAB11FIP3O75154 756 aa19.77■□□□□ 0.76
SCARB2-210ENST00000638567 MRPL50Q8N5N7 158 aaKnown RBP19.77■□□□□ 0.76
SCARB2-210ENST00000638567 MARCH6O60337 910 aa19.77■□□□□ 0.76
SCARB2-210ENST00000638567 C16orf71Q8IYS4 520 aaPredicted RBP19.77■□□□□ 0.76
SCARB2-210ENST00000638567 NOC3LQ8WTT2 800 aaKnown RBP19.77■□□□□ 0.76
SCARB2-210ENST00000638567 SNX21Q969T3 373 aa19.76■□□□□ 0.75
SCARB2-210ENST00000638567 A0A0U1RQG5 324 aaPredicted RBP19.76■□□□□ 0.75
SCARB2-210ENST00000638567 OLFM4Q6UX06 510 aa19.76■□□□□ 0.75
SCARB2-210ENST00000638567 PDILTQ8N807 584 aa19.76■□□□□ 0.75
SCARB2-210ENST00000638567 TATP17735 454 aaPredicted RBP19.76■□□□□ 0.75
SCARB2-210ENST00000638567 DDX11Q96FC9 970 aa19.76■□□□□ 0.75
SCARB2-210ENST00000638567 CAMK4Q16566 473 aa19.75■□□□□ 0.75
SCARB2-210ENST00000638567 ANKRD20A12PQ8NF67 263 aa19.75■□□□□ 0.75
SCARB2-210ENST00000638567 POLKQ9UBT6 870 aa19.75■□□□□ 0.75
SCARB2-210ENST00000638567 EIF2AK4Q9P2K8 1649 aaKnown RBP19.75■□□□□ 0.75
SCARB2-210ENST00000638567 VAMP4O75379 141 aa19.75■□□□□ 0.75
SCARB2-210ENST00000638567 USP25Q9UHP3 1055 aa19.75■□□□□ 0.75
SCARB2-210ENST00000638567 ZMYM4Q5VZL5 1548 aa19.75■□□□□ 0.75
SCARB2-210ENST00000638567 GPS2Q13227 327 aa19.75■□□□□ 0.75
SCARB2-210ENST00000638567 SPG7Q9UQ90 795 aa19.75■□□□□ 0.75
SCARB2-210ENST00000638567 DHX16O60231 1041 aaKnown RBP19.75■□□□□ 0.75
SCARB2-210ENST00000638567 ANKRD44Q8N8A2 993 aa19.75■□□□□ 0.75
SCARB2-210ENST00000638567 MAP3K11Q16584 847 aa19.74■□□□□ 0.75
SCARB2-210ENST00000638567 VPS37DQ86XT2 251 aa19.74■□□□□ 0.75
SCARB2-210ENST00000638567 BOLA2Q9H3K6 86 aa19.74■□□□□ 0.75
SCARB2-210ENST00000638567 IPO7O95373 1038 aaKnown RBP19.74■□□□□ 0.75
SCARB2-210ENST00000638567 ARGLU1Q9NWB6 273 aaPredicted RBP19.74■□□□□ 0.75
SCARB2-210ENST00000638567 CCDC183Q5T5S1 534 aa19.74■□□□□ 0.75
SCARB2-210ENST00000638567 FILIP1Q7Z7B0 1213 aa19.74■□□□□ 0.75
SCARB2-210ENST00000638567 LIMCH1Q9UPQ0 1083 aa19.74■□□□□ 0.75
SCARB2-210ENST00000638567 HSP90AB2PQ58FF8 381 aa19.73■□□□□ 0.75
SCARB2-210ENST00000638567 PHACTR3Q96KR7 559 aa19.73■□□□□ 0.75
SCARB2-210ENST00000638567 SAMD9Q5K651 1589 aa19.73■□□□□ 0.75
SCARB2-210ENST00000638567 BLMP54132 1417 aaPredicted RBP19.73■□□□□ 0.75
SCARB2-210ENST00000638567 TMX3Q96JJ7 454 aa19.73■□□□□ 0.75
SCARB2-210ENST00000638567 NPC1L1Q9UHC9 1359 aa19.73■□□□□ 0.75
SCARB2-210ENST00000638567 CLCN1P35523 988 aa19.72■□□□□ 0.75
SCARB2-210ENST00000638567 ZSCAN23Q3MJ62 389 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms