RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 SPDYE4A6NLX3 237 aa9.61□□□□□ -0.87
CDKL5-211ENST00000637881 AEBP1Q8IUX7 1158 aa9.61□□□□□ -0.87
CDKL5-211ENST00000637881 NCAPGQ9BPX3 1015 aa9.61□□□□□ -0.87
CDKL5-211ENST00000637881 RBSNQ9H1K0 784 aa9.61□□□□□ -0.87
CDKL5-211ENST00000637881 U3KPZ7 1027 aaPredicted RBP9.61□□□□□ -0.87
CDKL5-211ENST00000637881 ZNF521Q96K83 1311 aa9.61□□□□□ -0.87
CDKL5-211ENST00000637881 PLEKHH1Q9ULM0 1364 aa9.6□□□□□ -0.87
CDKL5-211ENST00000637881 U2AF2P26368 475 aaKnown RBP eCLIP9.6□□□□□ -0.87
CDKL5-211ENST00000637881 CARD10Q9BWT7 1032 aa9.6□□□□□ -0.87
CDKL5-211ENST00000637881 CTNNA3Q9UI47 895 aa9.6□□□□□ -0.87
CDKL5-211ENST00000637881 AMOTL2Q9Y2J4 779 aa9.6□□□□□ -0.87
CDKL5-211ENST00000637881 TBX22Q9Y458 520 aa9.6□□□□□ -0.87
CDKL5-211ENST00000637881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.6□□□□□ -0.87
CDKL5-211ENST00000637881 PRAG1Q86YV5 1406 aa9.6□□□□□ -0.87
CDKL5-211ENST00000637881 METP08581 1390 aa9.6□□□□□ -0.87
CDKL5-211ENST00000637881 MYCNP04198 464 aaPredicted RBP9.6□□□□□ -0.87
CDKL5-211ENST00000637881 NOLC1Q14978 699 aaKnown RBP eCLIP9.6□□□□□ -0.87
CDKL5-211ENST00000637881 LRSAM1Q6UWE0 723 aa9.6□□□□□ -0.87
CDKL5-211ENST00000637881 CLUAP1Q96AJ1 413 aa9.6□□□□□ -0.87
CDKL5-211ENST00000637881 PPLO60437 1756 aa9.59□□□□□ -0.87
CDKL5-211ENST00000637881 IGHDP01880 384 aa9.59□□□□□ -0.87
CDKL5-211ENST00000637881 BRPF1P55201 1214 aaPredicted RBP9.59□□□□□ -0.87
CDKL5-211ENST00000637881 LMOD3Q0VAK6 560 aa9.59□□□□□ -0.87
CDKL5-211ENST00000637881 KRT222Q8N1A0 295 aa9.59□□□□□ -0.87
CDKL5-211ENST00000637881 NGEFQ8N5V2 710 aa9.59□□□□□ -0.87
CDKL5-211ENST00000637881 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
CDKL5-211ENST00000637881 PIK3C2GO75747 1445 aa9.59□□□□□ -0.87
CDKL5-211ENST00000637881 KDM5AP29375 1690 aaKnown RBP9.58□□□□□ -0.88
CDKL5-211ENST00000637881 TPM3P06753 285 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 TNNT3P45378 269 aaPredicted RBP9.58□□□□□ -0.88
CDKL5-211ENST00000637881 UVSSAQ2YD98 709 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 NBPF20Q3BBV1 942 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 WAPLQ7Z5K2 1190 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 C14orf37Q86TY3 774 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 TRMT2AQ8IZ69 625 aaKnown RBP9.58□□□□□ -0.88
CDKL5-211ENST00000637881 MYOM2P54296 1465 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 ZNF335Q9H4Z2 1342 aaPredicted RBP9.58□□□□□ -0.88
CDKL5-211ENST00000637881 ADAMTS13Q76LX8 1427 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 LAMC1P11047 1609 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 BAG4O95429 457 aaKnown RBP9.58□□□□□ -0.88
CDKL5-211ENST00000637881 KCNA6P17658 529 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 NOP2P46087 812 aaKnown RBP9.58□□□□□ -0.88
CDKL5-211ENST00000637881 MUM1L1Q5H9M0 696 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
CDKL5-211ENST00000637881 CERS3Q8IU89 383 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 SMC4Q9NTJ3 1288 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 FAM53CQ9NYF3 392 aa9.58□□□□□ -0.88
CDKL5-211ENST00000637881 IQSEC2Q5JU85 1478 aa9.57□□□□□ -0.88
CDKL5-211ENST00000637881 NEURL4Q96JN8 1562 aa9.57□□□□□ -0.88
CDKL5-211ENST00000637881 ALKQ9UM73 1620 aa9.57□□□□□ -0.88
CDKL5-211ENST00000637881 TULP1O00294 542 aaPredicted RBP9.57□□□□□ -0.88
CDKL5-211ENST00000637881 REC8O95072 547 aa9.57□□□□□ -0.88
CDKL5-211ENST00000637881 GTF2A1P52655 376 aaPredicted RBP9.57□□□□□ -0.88
CDKL5-211ENST00000637881 GOLGA2Q08379 1002 aa9.57□□□□□ -0.88
CDKL5-211ENST00000637881 ICE2Q659A1 982 aa9.57□□□□□ -0.88
CDKL5-211ENST00000637881 RASSF4Q9H2L5 321 aa9.57□□□□□ -0.88
CDKL5-211ENST00000637881 CEP83Q9Y592 693 aa9.57□□□□□ -0.88
CDKL5-211ENST00000637881 STRCQ7RTU9 1775 aa9.56□□□□□ -0.88
CDKL5-211ENST00000637881 NUCB2P80303 420 aa9.56□□□□□ -0.88
CDKL5-211ENST00000637881 PRAM1Q96QH2 718 aa9.56□□□□□ -0.88
CDKL5-211ENST00000637881 IFT172Q9UG01 1749 aa9.56□□□□□ -0.88
CDKL5-211ENST00000637881 KIF1CO43896 1103 aaKnown RBP9.55□□□□□ -0.88
CDKL5-211ENST00000637881 SATB1Q01826 763 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 AMER1Q5JTC6 1135 aaPredicted RBP9.55□□□□□ -0.88
CDKL5-211ENST00000637881 FAM184AQ8NB25 1140 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 BANK1Q8NDB2 785 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 POLR3GLQ9BT43 218 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 MED14O60244 1454 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 NRXN1Q9ULB1 1477 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 IQGAP1P46940 1657 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 ST20-MTHFSA0A0A6YYL1 179 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 GOLGA6L6A8MZA4 724 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 IGSF3O75054 1194 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 GUCY2CP25092 1073 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 CYP2C19P33261 490 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 PRIM1P49642 420 aaKnown RBP9.55□□□□□ -0.88
CDKL5-211ENST00000637881 SLFN5Q08AF3 891 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 HSP90AB3PQ58FF7 597 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 TICAM2Q86XR7 235 aa9.55□□□□□ -0.88
CDKL5-211ENST00000637881 PTPRUQ92729 1446 aa9.54□□□□□ -0.88
CDKL5-211ENST00000637881 NUTM2FA1L443 756 aa9.54□□□□□ -0.88
CDKL5-211ENST00000637881 RIOK3O14730 519 aaKnown RBP9.54□□□□□ -0.88
CDKL5-211ENST00000637881 MBD3O95983 291 aa9.54□□□□□ -0.88
CDKL5-211ENST00000637881 CCDC172P0C7W6 258 aa9.54□□□□□ -0.88
CDKL5-211ENST00000637881 CAVIN1Q6NZI2 390 aaKnown RBP9.54□□□□□ -0.88
CDKL5-211ENST00000637881 KIF18AQ8NI77 898 aa9.54□□□□□ -0.88
CDKL5-211ENST00000637881 TSC1Q92574 1164 aa9.54□□□□□ -0.88
CDKL5-211ENST00000637881 SIRT1Q96EB6 747 aa9.54□□□□□ -0.88
CDKL5-211ENST00000637881 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
CDKL5-211ENST00000637881 LMBRD1Q9NUN5 540 aa9.54□□□□□ -0.88
CDKL5-211ENST00000637881 MINK1Q8N4C8 1332 aaPredicted RBP9.54□□□□□ -0.88
CDKL5-211ENST00000637881 KIF16BQ96L93 1317 aa9.54□□□□□ -0.88
CDKL5-211ENST00000637881 YTHDC2Q9H6S0 1430 aaKnown RBP9.54□□□□□ -0.88
CDKL5-211ENST00000637881 K7ELQ4 463 aaPredicted RBP9.53□□□□□ -0.88
CDKL5-211ENST00000637881 DHX16O60231 1041 aaKnown RBP9.53□□□□□ -0.88
CDKL5-211ENST00000637881 NCBP1Q09161 790 aaKnown RBP9.53□□□□□ -0.88
CDKL5-211ENST00000637881 RAD51AP2Q09MP3 1159 aa9.53□□□□□ -0.88
CDKL5-211ENST00000637881 EGFL6Q8IUX8 553 aa9.53□□□□□ -0.88
CDKL5-211ENST00000637881 PDZRN3Q9UPQ7 1066 aa9.53□□□□□ -0.88
CDKL5-211ENST00000637881 SETBP1Q9Y6X0 1596 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms