RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 IGBP1P78318 339 aa4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 SLC20A2Q08357 652 aa4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 MAGI3Q5TCQ9 1506 aa4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 CCDC189A1A4V9 331 aa4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 IPO5O00410 1097 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 E2F5Q15329 346 aa4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 EP400Q96L91 3159 aa4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 RPGRIP1LQ68CZ1 1315 aa4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 PPFIA4O75335 1185 aa4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 TSR1Q2NL82 804 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 CCDC91Q7Z6B0 441 aa4.66□□□□□ -1.66
R3HDM1-220ENST00000628915 PAX7P23759 505 aa4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 RDXP35241 583 aaKnown RBP4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 CBX1P83916 185 aa4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 PSMD2Q13200 908 aa4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 ZNF579Q8NAF0 562 aaKnown RBP4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 CXorf56Q9H5V9 222 aa4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 ZCCHC11Q5TAX3 1644 aaKnown RBP4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 ABCC10Q5T3U5 1492 aa4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 PSMC1P62191 440 aaKnown RBP4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 CCDC92Q53HC0 331 aaPredicted RBP4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 NUTM2GQ5VZR2 741 aa4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 AP1ARQ63HQ0 302 aa4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 CCDC146Q8IYE0 955 aa4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 C1orf131Q8NDD1 294 aaKnown RBP4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 LRRC27Q9C0I9 530 aa4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 AQRO60306 1485 aaKnown RBP eCLIP4.65□□□□□ -1.66
R3HDM1-220ENST00000628915 PHLDB1Q86UU1 1377 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 CCDC70Q6NSX1 233 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 AMOTL1Q8IY63 956 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 OGFOD1Q8N543 542 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 TRIML1Q8N9V2 468 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 SREK1Q8WXA9 508 aaKnown RBP4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 DNAI2Q9GZS0 605 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 ERCC6L2Q5T890 1561 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 AKNAQ7Z591 1439 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 SHTN1A0MZ66 631 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 TSPY4P0CV99 314 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 TSPY10P0CW01 314 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 XRCC6P12956 609 aaKnown RBP eCLIP4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 FLT3P36888 993 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 SAFB2Q14151 953 aaKnown RBP eCLIP4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 NOM1Q5C9Z4 860 aaKnown RBP4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 KRI1Q8N9T8 703 aaKnown RBP4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 MPP4Q96JB8 637 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 KIF2CQ99661 725 aa4.65□□□□□ -1.67
R3HDM1-220ENST00000628915 CNTLNQ9NXG0 1405 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 KIF3CO14782 793 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 SLMAPQ14BN4 828 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 RSPH9Q9H1X1 276 aaPredicted RBP4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 PRKRIP1Q9H875 184 aaPredicted RBP4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 ARHGEF10LQ9HCE6 1279 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 POGKQ9P215 609 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 RABL2BQ9UNT1 228 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 PRXQ9BXM0 1461 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 FSD2A1L4K1 749 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 HELBQ8NG08 1087 aaPredicted RBP4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 PMM1Q92871 262 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 GBP4Q96PP9 640 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 UIMC1Q96RL1 719 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 MPHOSPH6Q99547 160 aaKnown RBP4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 TCEAL9Q9UHQ7 104 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 WDR7Q9Y4E6 1490 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 PPP1R12AO14974 1030 aaPredicted RBP4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 SKAP1Q86WV1 359 aa4.64□□□□□ -1.67
R3HDM1-220ENST00000628915 MAP2K2P36507 400 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 ABL2P42684 1182 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 RRP1P56182 461 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 CT47A1Q5JQC4 288 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 CHCHD4Q8N4Q1 142 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 TRERF1Q96PN7 1200 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 C22orf23Q9BZE7 217 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 DIS3Q9Y2L1 958 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 R3HCC1Q9Y3T6 440 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 MNX1P50219 401 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 SRPK2P78362 688 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 SF3B2Q13435 895 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 GIMAP6Q6P9H5 292 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 VPS37AQ8NEZ2 397 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 PAGR1Q9BTK6 254 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 BRMS1Q9HCU9 246 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 CEP126Q9P2H0 1117 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 ABCF2Q9UG63 623 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 RPS6KL1Q9Y6S9 549 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 KDM5AP29375 1690 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 SLC4A3P48751 1232 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 SESN3P58005 492 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 CCT2P78371 535 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 GPS2Q13227 327 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 RPUSD2Q8IZ73 545 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 DONSONQ9NYP3 566 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 OFD1O75665 1012 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 GABBR2O75899 941 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 ZC3H15Q8WU90 426 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 FAM212AQ96EL1 285 aa4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 ZNHIT6Q9NWK9 470 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-220ENST00000628915 ADAMTSL3P82987 1691 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 DISP1Q96F81 1524 aa4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 HSPA5P11021 654 aaKnown RBP4.62□□□□□ -1.67
R3HDM1-220ENST00000628915 CA8P35219 290 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms