RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 PPP6R1Q9UPN7 881 aa26.54■■□□□ 1.84
PCSK6-220ENST00000622483 RABEP1Q15276 862 aa26.53■■□□□ 1.84
PCSK6-220ENST00000622483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.53■■□□□ 1.849e-7■■■□□ 15.2
PCSK6-220ENST00000622483 IQSEC2Q5JU85 1478 aa26.52■■□□□ 1.84
PCSK6-220ENST00000622483 CCDC27Q2M243 656 aa26.52■■□□□ 1.84
PCSK6-220ENST00000622483 UTP14CQ5TAP6 766 aaKnown RBP26.52■■□□□ 1.84
PCSK6-220ENST00000622483 THUMPD2Q9BTF0 503 aaKnown RBP26.52■■□□□ 1.84
PCSK6-220ENST00000622483 AGLP35573 1532 aa26.52■■□□□ 1.84
PCSK6-220ENST00000622483 PPIP5K1Q6PFW1 1433 aa26.52■■□□□ 1.84
PCSK6-220ENST00000622483 PDE4CQ08493 712 aa26.52■■□□□ 1.84
PCSK6-220ENST00000622483 NOLC1Q14978 699 aaKnown RBP eCLIP26.52■■□□□ 1.84
PCSK6-220ENST00000622483 IPO8O15397 1037 aaKnown RBP26.51■■□□□ 1.83
PCSK6-220ENST00000622483 CDK19Q9BWU1 502 aa26.51■■□□□ 1.83
PCSK6-220ENST00000622483 PPLO60437 1756 aa26.51■■□□□ 1.83
PCSK6-220ENST00000622483 GTF2E1P29083 439 aaPredicted RBP26.51■■□□□ 1.83
PCSK6-220ENST00000622483 MCM5P33992 734 aa26.51■■□□□ 1.83
PCSK6-220ENST00000622483 GGNBP2Q9H3C7 697 aa26.5■■□□□ 1.83
PCSK6-220ENST00000622483 CABP1Q9NZU7 370 aa26.5■■□□□ 1.83
PCSK6-220ENST00000622483 TMEM131LA2VDJ0 1609 aa26.5■■□□□ 1.83
PCSK6-220ENST00000622483 TSPY26PQ9H489 355 aa26.5■■□□□ 1.83
PCSK6-220ENST00000622483 BCL2L12Q9HB09 334 aa26.5■■□□□ 1.83
PCSK6-220ENST00000622483 EVC2Q86UK5 1308 aa26.49■■□□□ 1.83
PCSK6-220ENST00000622483 CGNQ9P2M7 1197 aaKnown RBP26.49■■□□□ 1.83
PCSK6-220ENST00000622483 KIF3AQ9Y496 699 aa26.49■■□□□ 1.83
PCSK6-220ENST00000622483 NRXN1Q9ULB1 1477 aa26.49■■□□□ 1.83
PCSK6-220ENST00000622483 DTNBO60941 627 aa26.48■■□□□ 1.83
PCSK6-220ENST00000622483 GADD45BO75293 160 aaPredicted RBP26.48■■□□□ 1.83
PCSK6-220ENST00000622483 ADGRB1O14514 1584 aa26.48■■□□□ 1.83
PCSK6-220ENST00000622483 IQGAP1P46940 1657 aa26.48■■□□□ 1.83
PCSK6-220ENST00000622483 CHMP4BQ9H444 224 aaKnown RBP26.48■■□□□ 1.83
PCSK6-220ENST00000622483 ZBTB7BO15156 539 aaPredicted RBP26.47■■□□□ 1.83
PCSK6-220ENST00000622483 USP26Q9BXU7 913 aa26.47■■□□□ 1.83
PCSK6-220ENST00000622483 SMARCA5O60264 1052 aaPredicted RBP26.47■■□□□ 1.83
PCSK6-220ENST00000622483 YTHDC2Q9H6S0 1430 aaKnown RBP26.47■■□□□ 1.83
PCSK6-220ENST00000622483 KDM5AP29375 1690 aaKnown RBP26.46■■□□□ 1.83
PCSK6-220ENST00000622483 SOX12O15370 315 aa26.46■■□□□ 1.83
PCSK6-220ENST00000622483 PDCL2Q8N4E4 241 aa26.45■■□□□ 1.83
PCSK6-220ENST00000622483 SHPRHQ149N8 1683 aa26.45■■□□□ 1.82
PCSK6-220ENST00000622483 ST18O60284 1047 aa26.45■■□□□ 1.82
PCSK6-220ENST00000622483 PLEKHM2Q8IWE5 1019 aa26.44■■□□□ 1.82
PCSK6-220ENST00000622483 GCC1Q96CN9 775 aa26.44■■□□□ 1.82
PCSK6-220ENST00000622483 IFT172Q9UG01 1749 aa26.44■■□□□ 1.82
PCSK6-220ENST00000622483 TSPYL6Q8N831 410 aa26.43■■□□□ 1.82
PCSK6-220ENST00000622483 ZC3H13Q5T200 1668 aaKnown RBP26.43■■□□□ 1.82
PCSK6-220ENST00000622483 NEK4P51957 841 aa26.43■■□□□ 1.82
PCSK6-220ENST00000622483 ADCY5O95622 1261 aa26.42■■□□□ 1.82
PCSK6-220ENST00000622483 ZNF771Q7L3S4 317 aaPredicted RBP26.42■■□□□ 1.82
PCSK6-220ENST00000622483 EID1Q9Y6B2 187 aa26.42■■□□□ 1.82
PCSK6-220ENST00000622483 SPC24Q8NBT2 197 aa26.42■■□□□ 1.82
PCSK6-220ENST00000622483 HCLS1P14317 486 aaPredicted RBP26.41■■□□□ 1.82
PCSK6-220ENST00000622483 PIBF1Q8WXW3 757 aa26.41■■□□□ 1.82
PCSK6-220ENST00000622483 TMEM2Q9UHN6 1383 aa26.4■■□□□ 1.82
PCSK6-220ENST00000622483 GTPBP4Q9BZE4 634 aaKnown RBP26.39■■□□□ 1.82
PCSK6-220ENST00000622483 RIOK3O14730 519 aaKnown RBP26.38■■□□□ 1.81
PCSK6-220ENST00000622483 PLCD3Q8N3E9 789 aa26.38■■□□□ 1.81
PCSK6-220ENST00000622483 CWC22Q9HCG8 908 aaKnown RBP26.38■■□□□ 1.81
PCSK6-220ENST00000622483 ZRANB1Q9UGI0 708 aa26.38■■□□□ 1.81
PCSK6-220ENST00000622483 CT47B1P0C2W7 299 aaPredicted RBP26.38■■□□□ 1.81
PCSK6-220ENST00000622483 TSHZ3Q63HK5 1081 aa26.37■■□□□ 1.81
PCSK6-220ENST00000622483 PRIMPOLQ96LW4 560 aa26.37■■□□□ 1.81
PCSK6-220ENST00000622483 SDSP20132 328 aa26.37■■□□□ 1.81
PCSK6-220ENST00000622483 PTPRMP28827 1452 aa26.37■■□□□ 1.81
PCSK6-220ENST00000622483 ALKQ9UM73 1620 aa26.37■■□□□ 1.81
PCSK6-220ENST00000622483 HMGN5P82970 282 aaKnown RBP26.37■■□□□ 1.81
PCSK6-220ENST00000622483 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.37■■□□□ 1.81
PCSK6-220ENST00000622483 SPATA31D1Q6ZQQ2 1576 aa26.36■■□□□ 1.81
PCSK6-220ENST00000622483 TMX3Q96JJ7 454 aa26.36■■□□□ 1.81
PCSK6-220ENST00000622483 PLEKHF1Q96S99 279 aa26.36■■□□□ 1.81
PCSK6-220ENST00000622483 TTC22Q5TAA0 569 aa26.36■■□□□ 1.81
PCSK6-220ENST00000622483 KIF20AO95235 890 aa26.35■■□□□ 1.81
PCSK6-220ENST00000622483 MBD3O95983 291 aa26.35■■□□□ 1.81
PCSK6-220ENST00000622483 REREQ9P2R6 1566 aa26.35■■□□□ 1.81
PCSK6-220ENST00000622483 INTS3Q68E01 1043 aaKnown RBP26.34■■□□□ 1.81
PCSK6-220ENST00000622483 LETM1O95202 739 aaPredicted RBP26.34■■□□□ 1.81
PCSK6-220ENST00000622483 NAA30Q147X3 362 aaPredicted RBP26.34■■□□□ 1.81
PCSK6-220ENST00000622483 AMOTL2Q9Y2J4 779 aa26.34■■□□□ 1.81
PCSK6-220ENST00000622483 HDGFP51858 240 aaKnown RBP26.34■■□□□ 1.81
PCSK6-220ENST00000622483 PYCARDQ9ULZ3 195 aa26.34■■□□□ 1.81
PCSK6-220ENST00000622483 LARP6Q9BRS8 491 aaKnown RBP26.32■■□□□ 1.8
PCSK6-220ENST00000622483 TMEM51Q9NW97 253 aa26.32■■□□□ 1.8
PCSK6-220ENST00000622483 USP48Q86UV5 1035 aa26.32■■□□□ 1.8
PCSK6-220ENST00000622483 THEMISQ8N1K5 641 aaPredicted RBP26.32■■□□□ 1.8
PCSK6-220ENST00000622483 NAP1L2Q9ULW6 460 aaPredicted RBP26.32■■□□□ 1.8
PCSK6-220ENST00000622483 UPF3BQ9BZI7 483 aaKnown RBP26.31■■□□□ 1.8
PCSK6-220ENST00000622483 QRICH2Q9H0J4 1663 aa26.3■■□□□ 1.8
PCSK6-220ENST00000622483 A0A1W2PP64 1363 aa26.3■■□□□ 1.8
PCSK6-220ENST00000622483 ABCC11Q96J66 1382 aa26.3■■□□□ 1.8
PCSK6-220ENST00000622483 TULP4Q9NRJ4 1543 aa26.3■■□□□ 1.8
PCSK6-220ENST00000622483 HMOX1P09601 288 aa26.3■■□□□ 1.8
PCSK6-220ENST00000622483 ZFYVE9O95405 1425 aa26.3■■□□□ 1.8
PCSK6-220ENST00000622483 ROBO2Q9HCK4 1378 aa26.29■■□□□ 1.8
PCSK6-220ENST00000622483 FKBP5Q13451 457 aaPredicted RBP26.29■■□□□ 1.8
PCSK6-220ENST00000622483 HSPA2P54652 639 aa26.28■■□□□ 1.8
PCSK6-220ENST00000622483 KCNA6P17658 529 aa26.26■■□□□ 1.79
PCSK6-220ENST00000622483 GTF2F1P35269 517 aaKnown RBP eCLIP26.26■■□□□ 1.792e-10■■■■■ 30.6
PCSK6-220ENST00000622483 SYAP1Q96A49 352 aaPredicted RBP26.26■■□□□ 1.79
PCSK6-220ENST00000622483 MRPL50Q8N5N7 158 aaKnown RBP26.26■■□□□ 1.79
PCSK6-220ENST00000622483 NEURL4Q96JN8 1562 aa26.26■■□□□ 1.79
PCSK6-220ENST00000622483 CHAF1AQ13111 956 aaPredicted RBP26.25■■□□□ 1.79
PCSK6-220ENST00000622483 CASC1Q6TDU7 716 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms