RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 CENPJQ9HC77 1338 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-209ENST00000620502 KIF1AQ12756 1690 aa9.29□□□□□ -0.92
BRCC3-209ENST00000620502 PXDNQ92626 1479 aa9.29□□□□□ -0.92
BRCC3-209ENST00000620502 TESPA1A2RU30 521 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-209ENST00000620502 FOXO3O43524 673 aa9.29□□□□□ -0.92
BRCC3-209ENST00000620502 PSEN2P49810 448 aa9.29□□□□□ -0.92
BRCC3-209ENST00000620502 CCER1Q8TC90 406 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-209ENST00000620502 LRRC59Q96AG4 307 aaKnown RBP9.29□□□□□ -0.92
BRCC3-209ENST00000620502 CDK19Q9BWU1 502 aa9.29□□□□□ -0.92
BRCC3-209ENST00000620502 TULP4Q9NRJ4 1543 aa9.29□□□□□ -0.92
BRCC3-209ENST00000620502 EN1Q05925 392 aaPredicted RBP9.28□□□□□ -0.92
BRCC3-209ENST00000620502 DISP3Q9P2K9 1392 aa9.27□□□□□ -0.93
BRCC3-209ENST00000620502 PTPREP23469 700 aa9.27□□□□□ -0.93
BRCC3-209ENST00000620502 LSM11P83369 360 aaKnown RBP eCLIP9.27□□□□□ -0.93
BRCC3-209ENST00000620502 XPCQ01831 940 aaPredicted RBP9.27□□□□□ -0.93
BRCC3-209ENST00000620502 NUDT16Q96DE0 195 aaKnown RBP9.27□□□□□ -0.93
BRCC3-209ENST00000620502 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
BRCC3-209ENST00000620502 CARD11Q9BXL7 1154 aa9.27□□□□□ -0.93
BRCC3-209ENST00000620502 SPATA31A6Q5VVP1 1343 aa9.27□□□□□ -0.93
BRCC3-209ENST00000620502 NPHP3Q7Z494 1330 aa9.27□□□□□ -0.93
BRCC3-209ENST00000620502 ATP7BP35670 1465 aa9.27□□□□□ -0.93
BRCC3-209ENST00000620502 TOPAZ1Q8N9V7 1692 aa9.26□□□□□ -0.93
BRCC3-209ENST00000620502 EIF3AQ14152 1382 aaKnown RBP9.26□□□□□ -0.93
BRCC3-209ENST00000620502 PNPLA6Q8IY17 1366 aa9.26□□□□□ -0.93
BRCC3-209ENST00000620502 ITSN1Q15811 1721 aa9.26□□□□□ -0.93
BRCC3-209ENST00000620502 C6orf132Q5T0Z8 1188 aa9.26□□□□□ -0.93
BRCC3-209ENST00000620502 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
BRCC3-209ENST00000620502 KRT28Q7Z3Y7 464 aa9.26□□□□□ -0.93
BRCC3-209ENST00000620502 PMFBP1Q8TBY8 1022 aa9.26□□□□□ -0.93
BRCC3-209ENST00000620502 LRP6O75581 1613 aa9.26□□□□□ -0.93
BRCC3-209ENST00000620502 COL22A1Q8NFW1 1626 aaPredicted RBP9.26□□□□□ -0.93
BRCC3-209ENST00000620502 RGS17Q9UGC6 210 aaPredicted RBP9.25□□□□□ -0.93
BRCC3-209ENST00000620502 PSME1Q06323 249 aa9.24□□□□□ -0.93
BRCC3-209ENST00000620502 TSR1Q2NL82 804 aaKnown RBP9.24□□□□□ -0.93
BRCC3-209ENST00000620502 TRPM3Q9HCF6 1732 aaPredicted RBP9.24□□□□□ -0.93
BRCC3-209ENST00000620502 SPATA31A3Q5VYP0 1347 aa9.24□□□□□ -0.93
BRCC3-209ENST00000620502 PLEKHG3A1L390 1219 aa9.23□□□□□ -0.93
BRCC3-209ENST00000620502 NUTM2BA6NNL0 878 aaPredicted RBP9.23□□□□□ -0.93
BRCC3-209ENST00000620502 NUTM2EB1AL46 878 aaPredicted RBP9.23□□□□□ -0.93
BRCC3-209ENST00000620502 PPP1R3GB7ZBB8 358 aa9.23□□□□□ -0.93
BRCC3-209ENST00000620502 MAP3K7O43318 606 aa9.23□□□□□ -0.93
BRCC3-209ENST00000620502 COL9A1P20849 921 aa9.23□□□□□ -0.93
BRCC3-209ENST00000620502 SRPK2P78362 688 aaKnown RBP9.23□□□□□ -0.93
BRCC3-209ENST00000620502 NUTM2AQ8IVF1 878 aaPredicted RBP9.23□□□□□ -0.93
BRCC3-209ENST00000620502 EVC2Q86UK5 1308 aa9.23□□□□□ -0.93
BRCC3-209ENST00000620502 POLR3AO14802 1390 aaPredicted RBP9.23□□□□□ -0.93
BRCC3-209ENST00000620502 SBNO2Q9Y2G9 1366 aa9.23□□□□□ -0.93
BRCC3-209ENST00000620502 ANKRD13DQ6ZTN6 518 aa9.22□□□□□ -0.93
BRCC3-209ENST00000620502 ALS2Q96Q42 1657 aa9.22□□□□□ -0.93
BRCC3-209ENST00000620502 SBNO1A3KN83 1393 aa9.22□□□□□ -0.93
BRCC3-209ENST00000620502 ST20-MTHFSA0A0A6YYL1 179 aa9.21□□□□□ -0.94
BRCC3-209ENST00000620502 TK2O00142 265 aa9.21□□□□□ -0.94
BRCC3-209ENST00000620502 ILDR2Q71H61 639 aa9.21□□□□□ -0.94
BRCC3-209ENST00000620502 NGDNQ8NEJ9 315 aaKnown RBP9.21□□□□□ -0.94
BRCC3-209ENST00000620502 TESK2Q96S53 571 aa9.21□□□□□ -0.94
BRCC3-209ENST00000620502 SLC4A5Q9BY07 1137 aa9.21□□□□□ -0.94
BRCC3-209ENST00000620502 ACEP12821 1306 aa9.21□□□□□ -0.94
BRCC3-209ENST00000620502 TNS3Q68CZ2 1445 aa9.21□□□□□ -0.94
BRCC3-209ENST00000620502 PPIP5K1Q6PFW1 1433 aa9.21□□□□□ -0.94
BRCC3-209ENST00000620502 SMYD5Q6GMV2 418 aa9.2□□□□□ -0.94
BRCC3-209ENST00000620502 ZBED2Q9BTP6 218 aa9.2□□□□□ -0.94
BRCC3-209ENST00000620502 CABP1Q9NZU7 370 aa9.2□□□□□ -0.94
BRCC3-209ENST00000620502 MARF1Q9Y4F3 1742 aaKnown RBP9.19□□□□□ -0.94
BRCC3-209ENST00000620502 ADGRD1Q6QNK2 874 aa9.19□□□□□ -0.94
BRCC3-209ENST00000620502 SPNS2Q8IVW8 549 aa9.19□□□□□ -0.94
BRCC3-209ENST00000620502 CDHR5Q9HBB8 845 aa9.19□□□□□ -0.94
BRCC3-209ENST00000620502 VPS9D1Q9Y2B5 631 aa9.19□□□□□ -0.94
BRCC3-209ENST00000620502 ABCA3Q99758 1704 aa9.19□□□□□ -0.94
BRCC3-209ENST00000620502 ARHGEF10O15013 1369 aa9.18□□□□□ -0.94
BRCC3-209ENST00000620502 ADAMTS2O95450 1211 aa9.18□□□□□ -0.94
BRCC3-209ENST00000620502 AKAP12Q02952 1782 aa9.18□□□□□ -0.94
BRCC3-209ENST00000620502 MEX3CQ5U5Q3 659 aaKnown RBP9.18□□□□□ -0.94
BRCC3-209ENST00000620502 POTEAQ6S8J7 498 aa9.18□□□□□ -0.94
BRCC3-209ENST00000620502 CABLES1Q8TDN4 633 aa9.18□□□□□ -0.94
BRCC3-209ENST00000620502 USP47Q96K76 1375 aa9.18□□□□□ -0.94
BRCC3-209ENST00000620502 PUS7Q96PZ0 661 aaKnown RBP9.18□□□□□ -0.94
BRCC3-209ENST00000620502 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
BRCC3-209ENST00000620502 RBM26Q5T8P6 1007 aaKnown RBP9.17□□□□□ -0.94
BRCC3-209ENST00000620502 LMOD2Q6P5Q4 547 aa9.17□□□□□ -0.94
BRCC3-209ENST00000620502 C8orf37Q96NL8 207 aa9.17□□□□□ -0.94
BRCC3-209ENST00000620502 NPDC1Q9NQX5 325 aaPredicted RBP9.17□□□□□ -0.94
BRCC3-209ENST00000620502 CPSF1Q10570 1443 aaKnown RBP9.16□□□□□ -0.94
BRCC3-209ENST00000620502 SSH2Q76I76 1423 aa9.16□□□□□ -0.94
BRCC3-209ENST00000620502 ATAD2Q6PL18 1390 aa9.16□□□□□ -0.94
BRCC3-209ENST00000620502 AFF2P51816 1311 aa9.16□□□□□ -0.94
BRCC3-209ENST00000620502 HRO43593 1189 aa9.16□□□□□ -0.94
BRCC3-209ENST00000620502 CD163L1Q9NR16 1453 aa9.15□□□□□ -0.94
BRCC3-209ENST00000620502 USP6P35125 1406 aa9.15□□□□□ -0.94
BRCC3-209ENST00000620502 BRD4O60885 1362 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-209ENST00000620502 PROX2Q3B8N5 592 aa9.15□□□□□ -0.94
BRCC3-209ENST00000620502 ZNF772Q68DY9 489 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-209ENST00000620502 FNBP4Q8N3X1 1017 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-209ENST00000620502 NGLY1Q96IV0 654 aa9.15□□□□□ -0.94
BRCC3-209ENST00000620502 SLC12A5Q9H2X9 1139 aa9.15□□□□□ -0.94
BRCC3-209ENST00000620502 MON2Q7Z3U7 1717 aa9.14□□□□□ -0.95
BRCC3-209ENST00000620502 PHRF1Q9P1Y6 1649 aaKnown RBP9.14□□□□□ -0.95
BRCC3-209ENST00000620502 PTGDRQ13258 359 aa9.14□□□□□ -0.95
BRCC3-209ENST00000620502 NUTM2GQ5VZR2 741 aa9.14□□□□□ -0.95
BRCC3-209ENST00000620502 NRKQ7Z2Y5 1582 aa9.14□□□□□ -0.95
BRCC3-209ENST00000620502 BCL9LQ86UU0 1499 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms