RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 ELL2O00472 640 aaPredicted RBP6.14□□□□□ -1.43
SYCP1-210ENST00000618516 NEFMP07197 916 aa6.14□□□□□ -1.43
SYCP1-210ENST00000618516 C1orf141Q5JVX7 400 aa6.14□□□□□ -1.43
SYCP1-210ENST00000618516 CARD10Q9BWT7 1032 aa6.14□□□□□ -1.43
SYCP1-210ENST00000618516 PDGFDQ9GZP0 370 aaPredicted RBP6.14□□□□□ -1.43
SYCP1-210ENST00000618516 COL5A2P05997 1499 aaPredicted RBP6.14□□□□□ -1.43
SYCP1-210ENST00000618516 AATKQ6ZMQ8 1374 aa6.14□□□□□ -1.43
SYCP1-210ENST00000618516 ITSN1Q15811 1721 aa6.14□□□□□ -1.43
SYCP1-210ENST00000618516 KIF1AQ12756 1690 aa6.14□□□□□ -1.43
SYCP1-210ENST00000618516 OVOS2A0A0J9YW53 1432 aa6.14□□□□□ -1.43
SYCP1-210ENST00000618516 OVOS2Q6IE36 1432 aa6.14□□□□□ -1.43
SYCP1-210ENST00000618516 TCERG1O14776 1098 aaKnown RBP6.14□□□□□ -1.43
SYCP1-210ENST00000618516 PRKRIP1Q9H875 184 aaPredicted RBP6.14□□□□□ -1.43
SYCP1-210ENST00000618516 LGR6Q9HBX8 967 aa6.14□□□□□ -1.43
SYCP1-210ENST00000618516 NUDCQ9Y266 331 aa6.14□□□□□ -1.43
SYCP1-210ENST00000618516 CRB1P82279 1406 aa6.13□□□□□ -1.43
SYCP1-210ENST00000618516 NINLQ9Y2I6 1382 aa6.13□□□□□ -1.43
SYCP1-210ENST00000618516 CYP27B1O15528 508 aa6.13□□□□□ -1.43
SYCP1-210ENST00000618516 CEP350Q5VT06 3117 aa6.13□□□□□ -1.43
SYCP1-210ENST00000618516 MAPK8IP3Q9UPT6 1336 aa6.13□□□□□ -1.43
SYCP1-210ENST00000618516 MSL1Q68DK7 614 aa6.13□□□□□ -1.43
SYCP1-210ENST00000618516 NFATC2IPQ8NCF5 419 aa6.13□□□□□ -1.43
SYCP1-210ENST00000618516 SLIT2O94813 1529 aa6.13□□□□□ -1.43
SYCP1-210ENST00000618516 ASAP1Q9ULH1 1129 aa6.12□□□□□ -1.43
SYCP1-210ENST00000618516 ADAMTS8Q9UP79 889 aa6.12□□□□□ -1.43
SYCP1-210ENST00000618516 ZBTB7AO95365 584 aa6.12□□□□□ -1.43
SYCP1-210ENST00000618516 BAG6P46379 1132 aa6.12□□□□□ -1.43
SYCP1-210ENST00000618516 MTHFSDQ2M296 383 aaKnown RBP6.12□□□□□ -1.43
SYCP1-210ENST00000618516 FAM196AQ6ZSG2 479 aa6.12□□□□□ -1.43
SYCP1-210ENST00000618516 PUS7Q96PZ0 661 aaKnown RBP6.12□□□□□ -1.43
SYCP1-210ENST00000618516 IL13P35225 146 aa6.12□□□□□ -1.43
SYCP1-210ENST00000618516 CABP4P57796 275 aa6.12□□□□□ -1.43
SYCP1-210ENST00000618516 ATF5Q9Y2D1 282 aaPredicted RBP6.12□□□□□ -1.43
SYCP1-210ENST00000618516 FAM177BA6PVY3 158 aa6.11□□□□□ -1.43
SYCP1-210ENST00000618516 RTF1Q92541 710 aaKnown RBP6.11□□□□□ -1.43
SYCP1-210ENST00000618516 BCL11AQ9H165 835 aa6.11□□□□□ -1.43
SYCP1-210ENST00000618516 TMOD3Q9NYL9 352 aa6.11□□□□□ -1.43
SYCP1-210ENST00000618516 ATRNO75882 1429 aa6.11□□□□□ -1.43
SYCP1-210ENST00000618516 RGPD5Q99666 1765 aa6.11□□□□□ -1.43
SYCP1-210ENST00000618516 CPDO75976 1380 aa6.11□□□□□ -1.43
SYCP1-210ENST00000618516 MEGF6O75095 1541 aa6.11□□□□□ -1.43
SYCP1-210ENST00000618516 APAF1O14727 1248 aa6.11□□□□□ -1.43
SYCP1-210ENST00000618516 TEFQ10587 303 aa6.11□□□□□ -1.43
SYCP1-210ENST00000618516 PELP1Q8IZL8 1130 aaKnown RBP6.11□□□□□ -1.43
SYCP1-210ENST00000618516 SPG7Q9UQ90 795 aa6.11□□□□□ -1.43
SYCP1-210ENST00000618516 TRPM3Q9HCF6 1732 aaPredicted RBP6.11□□□□□ -1.43
SYCP1-210ENST00000618516 PLEKHO1Q53GL0 409 aaPredicted RBP6.1□□□□□ -1.43
SYCP1-210ENST00000618516 TFCP2L1Q9NZI6 479 aa6.1□□□□□ -1.43
SYCP1-210ENST00000618516 INSRP06213 1382 aa6.1□□□□□ -1.43
SYCP1-210ENST00000618516 USP31Q70CQ4 1352 aa6.1□□□□□ -1.43
SYCP1-210ENST00000618516 SHPRHQ149N8 1683 aa6.1□□□□□ -1.43
SYCP1-210ENST00000618516 TOPAZ1Q8N9V7 1692 aa6.1□□□□□ -1.43
SYCP1-210ENST00000618516 NRKQ7Z2Y5 1582 aa6.1□□□□□ -1.43
SYCP1-210ENST00000618516 ALS2Q96Q42 1657 aa6.1□□□□□ -1.43
SYCP1-210ENST00000618516 KCNQ3O43525 872 aa6.1□□□□□ -1.43
SYCP1-210ENST00000618516 EIF2S2P20042 333 aaKnown RBP6.1□□□□□ -1.43
SYCP1-210ENST00000618516 PIGBQ92521 554 aa6.1□□□□□ -1.43
SYCP1-210ENST00000618516 ANXA1P04083 346 aa6.09□□□□□ -1.43
SYCP1-210ENST00000618516 RIPK4P57078 832 aa6.09□□□□□ -1.43
SYCP1-210ENST00000618516 KRT24Q2M2I5 525 aa6.09□□□□□ -1.43
SYCP1-210ENST00000618516 BICDL1Q6ZP65 573 aa6.09□□□□□ -1.43
SYCP1-210ENST00000618516 IFNL2Q8IZJ0 200 aa6.09□□□□□ -1.43
SYCP1-210ENST00000618516 CCDC24Q8N4L8 307 aa6.09□□□□□ -1.43
SYCP1-210ENST00000618516 CCNL1Q9UK58 526 aaPredicted RBP6.09□□□□□ -1.43
SYCP1-210ENST00000618516 GLI3P10071 1580 aa6.09□□□□□ -1.43
SYCP1-210ENST00000618516 MYOM1P52179 1685 aa6.09□□□□□ -1.43
SYCP1-210ENST00000618516 MYBBP1AQ9BQG0 1328 aaKnown RBP6.09□□□□□ -1.43
SYCP1-210ENST00000618516 PRAMEF22A3QJZ6 481 aa6.09□□□□□ -1.43
SYCP1-210ENST00000618516 CANXP27824 592 aaKnown RBP6.09□□□□□ -1.43
SYCP1-210ENST00000618516 ANO8Q9HCE9 1232 aaPredicted RBP6.09□□□□□ -1.43
SYCP1-210ENST00000618516 CDK12Q9NYV4 1490 aaPredicted RBP6.09□□□□□ -1.43
SYCP1-210ENST00000618516 NFAT5O94916 1531 aa6.09□□□□□ -1.44
SYCP1-210ENST00000618516 PHKG2P15735 406 aa6.08□□□□□ -1.44
SYCP1-210ENST00000618516 ATP6V1AP38606 617 aa6.08□□□□□ -1.44
SYCP1-210ENST00000618516 TXNRD1Q16881 649 aa6.08□□□□□ -1.44
SYCP1-210ENST00000618516 BARGINQ6ZT62 677 aa6.08□□□□□ -1.44
SYCP1-210ENST00000618516 MAP2P11137 1827 aaKnown RBP6.08□□□□□ -1.44
SYCP1-210ENST00000618516 PCDH11XQ9BZA7 1347 aa6.08□□□□□ -1.44
SYCP1-210ENST00000618516 PCDH11YQ9BZA8 1340 aa6.08□□□□□ -1.44
SYCP1-210ENST00000618516 NPHP1O15259 732 aa6.08□□□□□ -1.44
SYCP1-210ENST00000618516 TTC5Q8N0Z6 440 aa6.08□□□□□ -1.44
SYCP1-210ENST00000618516 RALBP1Q15311 655 aa6.08□□□□□ -1.44
SYCP1-210ENST00000618516 NPM2Q86SE8 214 aaKnown RBP6.08□□□□□ -1.44
SYCP1-210ENST00000618516 LRRC4BQ9NT99 713 aa6.08□□□□□ -1.44
SYCP1-210ENST00000618516 THRAP3Q9Y2W1 955 aaKnown RBP6.08□□□□□ -1.44
SYCP1-210ENST00000618516 PHRF1Q9P1Y6 1649 aaKnown RBP6.07□□□□□ -1.44
SYCP1-210ENST00000618516 LTN1O94822 1766 aa6.07□□□□□ -1.44
SYCP1-210ENST00000618516 PLCH1Q4KWH8 1693 aa6.07□□□□□ -1.44
SYCP1-210ENST00000618516 RTL5Q5HYW3 569 aaPredicted RBP6.07□□□□□ -1.44
SYCP1-210ENST00000618516 GNPATO15228 680 aa6.07□□□□□ -1.44
SYCP1-210ENST00000618516 MYL6BP14649 208 aa6.07□□□□□ -1.44
SYCP1-210ENST00000618516 HNRNPUQ00839 825 aaKnown RBP eCLIP6.07□□□□□ -1.44
SYCP1-210ENST00000618516 AIMP1Q12904 312 aaKnown RBP6.07□□□□□ -1.44
SYCP1-210ENST00000618516 TSR2Q969E8 191 aaKnown RBP6.07□□□□□ -1.44
SYCP1-210ENST00000618516 IGSF1Q8N6C5 1336 aa6.07□□□□□ -1.44
SYCP1-210ENST00000618516 MON2Q7Z3U7 1717 aa6.06□□□□□ -1.44
SYCP1-210ENST00000618516 RGPD2P0DJD1 1756 aa6.06□□□□□ -1.44
SYCP1-210ENST00000618516 AKAP12Q02952 1782 aa6.06□□□□□ -1.44
SYCP1-210ENST00000618516 OVOS2A0A0G2JMS6 1433 aa6.06□□□□□ -1.44
SYCP1-210ENST00000618516 PROM2Q8N271 834 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms