RNA–Protein interactions for RNA: ENST00000618002.4

RPH3AL-222, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS P2 TSL 5 BASIC

Gene RPH3AL, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-222ENST00000618002 ZDHHC9Q9Y397 364 aa21.32■■□□□ 1
RPH3AL-222ENST00000618002 RPAP2Q8IXW5 612 aaPredicted RBP21.31■■□□□ 1
RPH3AL-222ENST00000618002 ST18O60284 1047 aa21.31■■□□□ 1
RPH3AL-222ENST00000618002 KRT24Q2M2I5 525 aa21.31■■□□□ 1
RPH3AL-222ENST00000618002 GPT2Q8TD30 523 aa21.31■■□□□ 1
RPH3AL-222ENST00000618002 PRIM1P49642 420 aaKnown RBP21.3■■□□□ 1
RPH3AL-222ENST00000618002 RRS1Q15050 365 aaKnown RBP21.3■■□□□ 1
RPH3AL-222ENST00000618002 RBM27Q9P2N5 1060 aaKnown RBP21.3■■□□□ 1
RPH3AL-222ENST00000618002 CDK12Q9NYV4 1490 aaPredicted RBP21.29■■□□□ 1
RPH3AL-222ENST00000618002 CASC1Q6TDU7 716 aa21.29■■□□□ 1
RPH3AL-222ENST00000618002 DLG5Q8TDM6 1919 aa21.29■■□□□ 1
RPH3AL-222ENST00000618002 RGS12O14924 1447 aa21.29■■□□□ 1
RPH3AL-222ENST00000618002 CHAMP1Q96JM3 812 aa21.29■■□□□ 1
RPH3AL-222ENST00000618002 PREX1Q8TCU6 1659 aa21.28■■□□□ 1
RPH3AL-222ENST00000618002 PDLIM2Q96JY6 352 aa21.28■■□□□ 1
RPH3AL-222ENST00000618002 HS1BP3Q53T59 392 aa21.27■■□□□ 1
RPH3AL-222ENST00000618002 RTL1A6NKG5 1358 aa21.27■■□□□ 1
RPH3AL-222ENST00000618002 AATKQ6ZMQ8 1374 aa21.27■■□□□ 1
RPH3AL-222ENST00000618002 CPSF1Q10570 1443 aaKnown RBP21.27■□□□□ 0.99
RPH3AL-222ENST00000618002 EDC4Q6P2E9 1401 aaKnown RBP21.27■□□□□ 0.99
RPH3AL-222ENST00000618002 MEIS3Q99687 375 aa21.26■□□□□ 0.99
RPH3AL-222ENST00000618002 REC8O95072 547 aa21.26■□□□□ 0.99
RPH3AL-222ENST00000618002 ZMYND15Q9H091 742 aa21.26■□□□□ 0.99
RPH3AL-222ENST00000618002 STAG3Q9UJ98 1225 aa21.26■□□□□ 0.99
RPH3AL-222ENST00000618002 MSH6P52701 1360 aa21.25■□□□□ 0.99
RPH3AL-222ENST00000618002 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.25■□□□□ 0.99
RPH3AL-222ENST00000618002 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.25■□□□□ 0.99
RPH3AL-222ENST00000618002 NOL7Q9UMY1 257 aaKnown RBP21.25■□□□□ 0.99
RPH3AL-222ENST00000618002 NEO1Q92859 1461 aa21.25■□□□□ 0.99
RPH3AL-222ENST00000618002 COG3Q96JB2 828 aa21.25■□□□□ 0.99
RPH3AL-222ENST00000618002 ERC2O15083 957 aa21.24■□□□□ 0.99
RPH3AL-222ENST00000618002 TMEM63CQ9P1W3 806 aa21.24■□□□□ 0.99
RPH3AL-222ENST00000618002 NSFL1CQ9UNZ2 370 aaKnown RBP21.24■□□□□ 0.99
RPH3AL-222ENST00000618002 AEBP1Q8IUX7 1158 aa21.23■□□□□ 0.99
RPH3AL-222ENST00000618002 PDCL3Q9H2J4 239 aa21.23■□□□□ 0.99
RPH3AL-222ENST00000618002 CHL1O00533 1208 aa21.22■□□□□ 0.99
RPH3AL-222ENST00000618002 NCKAP5LQ9HCH0 1330 aa21.22■□□□□ 0.99
RPH3AL-222ENST00000618002 WASLO00401 505 aaPredicted RBP21.22■□□□□ 0.99
RPH3AL-222ENST00000618002 FOXD4L5Q5VV16 416 aaPredicted RBP21.22■□□□□ 0.99
RPH3AL-222ENST00000618002 FOXD4L4Q8WXT5 416 aaPredicted RBP21.22■□□□□ 0.99
RPH3AL-222ENST00000618002 LRSAM1Q6UWE0 723 aa21.21■□□□□ 0.99
RPH3AL-222ENST00000618002 MCM10Q7L590 875 aa21.21■□□□□ 0.99
RPH3AL-222ENST00000618002 SYCE3A1L190 88 aa21.21■□□□□ 0.99
RPH3AL-222ENST00000618002 ZNF500O60304 480 aaPredicted RBP21.21■□□□□ 0.99
RPH3AL-222ENST00000618002 DLC1Q96QB1 1528 aa21.2■□□□□ 0.98
RPH3AL-222ENST00000618002 PTPRCP08575 1304 aa21.2■□□□□ 0.98
RPH3AL-222ENST00000618002 HAP1P54257 671 aaPredicted RBP21.2■□□□□ 0.98
RPH3AL-222ENST00000618002 TERF1P54274 439 aa21.2■□□□□ 0.98
RPH3AL-222ENST00000618002 SULT6B1Q6IMI4 303 aa21.2■□□□□ 0.98
RPH3AL-222ENST00000618002 R3HCC1Q9Y3T6 440 aaKnown RBP21.2■□□□□ 0.98
RPH3AL-222ENST00000618002 CPS1P31327 1500 aa21.2■□□□□ 0.98
RPH3AL-222ENST00000618002 NEK4P51957 841 aa21.19■□□□□ 0.98
RPH3AL-222ENST00000618002 PKNOX2Q96KN3 472 aa21.19■□□□□ 0.98
RPH3AL-222ENST00000618002 PDE1AP54750 535 aa21.19■□□□□ 0.98
RPH3AL-222ENST00000618002 XPCQ01831 940 aaPredicted RBP21.19■□□□□ 0.98
RPH3AL-222ENST00000618002 TMX3Q96JJ7 454 aa21.19■□□□□ 0.98
RPH3AL-222ENST00000618002 NUDT16Q96DE0 195 aaKnown RBP21.18■□□□□ 0.98
RPH3AL-222ENST00000618002 OSBPL3Q9H4L5 887 aa21.18■□□□□ 0.98
RPH3AL-222ENST00000618002 SLC4A2P04920 1241 aa21.18■□□□□ 0.98
RPH3AL-222ENST00000618002 KIAA0232Q92628 1395 aa21.17■□□□□ 0.98
RPH3AL-222ENST00000618002 EIF4A2Q14240 407 aaKnown RBP21.17■□□□□ 0.98
RPH3AL-222ENST00000618002 ZKSCAN5Q9Y2L8 839 aa21.17■□□□□ 0.98
RPH3AL-222ENST00000618002 RBM10P98175 930 aaKnown RBP21.16■□□□□ 0.98
RPH3AL-222ENST00000618002 HMMRO75330 724 aa21.16■□□□□ 0.98
RPH3AL-222ENST00000618002 TSHZ3Q63HK5 1081 aa21.15■□□□□ 0.98
RPH3AL-222ENST00000618002 RICTORQ6R327 1708 aa21.15■□□□□ 0.98
RPH3AL-222ENST00000618002 BRD1O95696 1058 aa21.14■□□□□ 0.98
RPH3AL-222ENST00000618002 SLC4A10Q6U841 1118 aa21.14■□□□□ 0.97
RPH3AL-222ENST00000618002 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.14■□□□□ 0.97
RPH3AL-222ENST00000618002 MIS18AQ9NYP9 233 aa21.14■□□□□ 0.97
RPH3AL-222ENST00000618002 CCDC61Q9Y6R9 512 aa21.14■□□□□ 0.97
RPH3AL-222ENST00000618002 F6X3S4 739 aa21.13■□□□□ 0.97
RPH3AL-222ENST00000618002 MBD3O95983 291 aa21.13■□□□□ 0.97
RPH3AL-222ENST00000618002 G2E3Q7L622 706 aa21.13■□□□□ 0.97
RPH3AL-222ENST00000618002 TXNDC2Q86VQ3 553 aa21.13■□□□□ 0.97
RPH3AL-222ENST00000618002 RNF214Q8ND24 703 aa21.13■□□□□ 0.97
RPH3AL-222ENST00000618002 PALD1Q9ULE6 856 aa21.13■□□□□ 0.97
RPH3AL-222ENST00000618002 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
RPH3AL-222ENST00000618002 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
RPH3AL-222ENST00000618002 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
RPH3AL-222ENST00000618002 ESYT1Q9BSJ8 1104 aa21.12■□□□□ 0.97
RPH3AL-222ENST00000618002 EXOC6BQ9Y2D4 811 aa21.12■□□□□ 0.97
RPH3AL-222ENST00000618002 CUL4AQ13619 759 aa21.12■□□□□ 0.97
RPH3AL-222ENST00000618002 MCM5P33992 734 aa21.11■□□□□ 0.97
RPH3AL-222ENST00000618002 A2ML1A8K2U0 1454 aa21.11■□□□□ 0.97
RPH3AL-222ENST00000618002 MCM2P49736 904 aa21.11■□□□□ 0.97
RPH3AL-222ENST00000618002 CCDC39Q9UFE4 941 aa21.11■□□□□ 0.97
RPH3AL-222ENST00000618002 NOL8Q76FK4 1167 aaKnown RBP21.1■□□□□ 0.97
RPH3AL-222ENST00000618002 FAM13BQ9NYF5 915 aa21.1■□□□□ 0.97
RPH3AL-222ENST00000618002 SALL3Q9BXA9 1300 aa21.1■□□□□ 0.97
RPH3AL-222ENST00000618002 METP08581 1390 aa21.09■□□□□ 0.97
RPH3AL-222ENST00000618002 CRB1P82279 1406 aa21.09■□□□□ 0.97
RPH3AL-222ENST00000618002 SETD1AO15047 1707 aaKnown RBP21.09■□□□□ 0.97
RPH3AL-222ENST00000618002 UQCRHLA0A096LP55 91 aa21.08■□□□□ 0.97
RPH3AL-222ENST00000618002 UQCRHP07919 91 aa21.08■□□□□ 0.97
RPH3AL-222ENST00000618002 CCT4P50991 539 aaKnown RBP21.08■□□□□ 0.97
RPH3AL-222ENST00000618002 CSPP1Q1MSJ5 1256 aa21.08■□□□□ 0.96
RPH3AL-222ENST00000618002 GNAI2P04899 355 aa21.07■□□□□ 0.96
RPH3AL-222ENST00000618002 HSP90AB2PQ58FF8 381 aa21.07■□□□□ 0.96
RPH3AL-222ENST00000618002 INTS4Q96HW7 963 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms