RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 NIP7Q9Y221 180 aaKnown RBP eCLIP8.35□□□□□ -1.07
ABCA13-208ENST00000611776 PSMD1Q99460 953 aa8.35□□□□□ -1.07
ABCA13-208ENST00000611776 PAGR1Q9BTK6 254 aa8.35□□□□□ -1.07
ABCA13-208ENST00000611776 CCDC158Q5M9N0 1113 aa8.35□□□□□ -1.07
ABCA13-208ENST00000611776 MPHOSPH9Q99550 1183 aa8.35□□□□□ -1.07
ABCA13-208ENST00000611776 RAPGEF2Q9Y4G8 1499 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 FOXD4L5Q5VV16 416 aaPredicted RBP8.34□□□□□ -1.07
ABCA13-208ENST00000611776 FLAD1Q8NFF5 587 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 FOXD4L4Q8WXT5 416 aaPredicted RBP8.34□□□□□ -1.07
ABCA13-208ENST00000611776 NLRP3Q96P20 1036 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 MFAP1P55081 439 aaKnown RBP8.34□□□□□ -1.07
ABCA13-208ENST00000611776 SLF2Q8IX21 1173 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 CKAP2LQ8IYA6 745 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 TNIP1Q15025 636 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 ARMC9Q7Z3E5 817 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 TCP11L2Q8N4U5 519 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 CHAMP1Q96JM3 812 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 SSTR3P32745 418 aaPredicted RBP8.34□□□□□ -1.07
ABCA13-208ENST00000611776 TPTE2Q6XPS3 522 aa8.34□□□□□ -1.07
ABCA13-208ENST00000611776 PCMTD1Q96MG8 357 aaPredicted RBP8.34□□□□□ -1.07
ABCA13-208ENST00000611776 IRX3P78415 501 aaPredicted RBP8.34□□□□□ -1.08
ABCA13-208ENST00000611776 HSCBQ8IWL3 235 aa8.34□□□□□ -1.08
ABCA13-208ENST00000611776 DRC7Q8IY82 874 aa8.34□□□□□ -1.08
ABCA13-208ENST00000611776 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.08
ABCA13-208ENST00000611776 DENND4BO75064 1496 aaPredicted RBP8.34□□□□□ -1.08
ABCA13-208ENST00000611776 NAIPQ13075 1403 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 CCDC152Q4G0S7 254 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 NUDT16Q96DE0 195 aaKnown RBP8.33□□□□□ -1.08
ABCA13-208ENST00000611776 MAP10Q9P2G4 905 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 DEFB132Q7Z7B7 95 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 FTOQ9C0B1 505 aaKnown RBP eCLIP8.33□□□□□ -1.08
ABCA13-208ENST00000611776 MIA2Q96PC5 1412 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 IGFBP4P22692 258 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 SF3A1Q15459 793 aaKnown RBP8.33□□□□□ -1.08
ABCA13-208ENST00000611776 ATP5J2-PTCD1G3V325 749 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 IL2RBP14784 551 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 MSNP26038 577 aaKnown RBP8.33□□□□□ -1.08
ABCA13-208ENST00000611776 CENPJQ9HC77 1338 aaPredicted RBP8.33□□□□□ -1.08
ABCA13-208ENST00000611776 CPLX1O14810 134 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 WDR7Q9Y4E6 1490 aa8.33□□□□□ -1.08
ABCA13-208ENST00000611776 HLA-DOAP06340 250 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 RAET1EQ8TD07 263 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 L3MBTL2Q969R5 705 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 MKNK2Q9HBH9 465 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 ARHGAP35Q9NRY4 1499 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 PDE6BP35913 854 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 METTL24Q5JXM2 366 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 SIRT1Q96EB6 747 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 ZNF644Q9H582 1327 aaPredicted RBP8.32□□□□□ -1.08
ABCA13-208ENST00000611776 ROCK1Q13464 1354 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 GINS2Q9Y248 185 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 FKBP4Q02790 459 aaKnown RBP eCLIP8.32□□□□□ -1.08
ABCA13-208ENST00000611776 CPLX2Q6PUV4 134 aaKnown RBP8.32□□□□□ -1.08
ABCA13-208ENST00000611776 ZNF692Q9BU19 519 aaPredicted RBP8.32□□□□□ -1.08
ABCA13-208ENST00000611776 SULT6B1Q6IMI4 303 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 DPP8Q6V1X1 898 aaPredicted RBP8.32□□□□□ -1.08
ABCA13-208ENST00000611776 CDK5RAP3Q96JB5 506 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 ATAD2Q6PL18 1390 aa8.32□□□□□ -1.08
ABCA13-208ENST00000611776 TFRCP02786 760 aaKnown RBP8.31□□□□□ -1.08
ABCA13-208ENST00000611776 PRKCSHP14314 528 aaPredicted RBP8.31□□□□□ -1.08
ABCA13-208ENST00000611776 MCTP1Q6DN14 999 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 SOGA3Q5TF21 947 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 PDCL3Q9H2J4 239 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 JAG2Q9Y219 1238 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 ECE1P42892 770 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 FOXD4L6Q3SYB3 417 aaPredicted RBP8.31□□□□□ -1.08
ABCA13-208ENST00000611776 FOXD4L3Q6VB84 417 aaPredicted RBP8.31□□□□□ -1.08
ABCA13-208ENST00000611776 NBPF11Q86T75 865 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 HOXD10P28358 340 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 RALYLQ86SE5 291 aaKnown RBP8.31□□□□□ -1.08
ABCA13-208ENST00000611776 ERC1Q8IUD2 1116 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 FANCAO15360 1455 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 PPP1R12BO60237 982 aaPredicted RBP8.31□□□□□ -1.08
ABCA13-208ENST00000611776 PDE4AP27815 886 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 NBPF15Q8N660 670 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 SUPT20HQ8NEM7 779 aa8.31□□□□□ -1.08
ABCA13-208ENST00000611776 HTATSF1O43719 755 aaKnown RBP8.3□□□□□ -1.08
ABCA13-208ENST00000611776 ZNF354CQ86Y25 554 aa8.3□□□□□ -1.08
ABCA13-208ENST00000611776 SLC10A4Q96EP9 437 aa8.3□□□□□ -1.08
ABCA13-208ENST00000611776 SLC5A4Q9NY91 659 aa8.3□□□□□ -1.08
ABCA13-208ENST00000611776 DHX37Q8IY37 1157 aaKnown RBP8.3□□□□□ -1.08
ABCA13-208ENST00000611776 CFAP70Q5T0N1 1121 aa8.3□□□□□ -1.08
ABCA13-208ENST00000611776 CCDC47Q96A33 483 aaKnown RBP8.3□□□□□ -1.08
ABCA13-208ENST00000611776 C11orf95C9JLR9 678 aaPredicted RBP8.3□□□□□ -1.08
ABCA13-208ENST00000611776 RIPK4P57078 832 aa8.3□□□□□ -1.08
ABCA13-208ENST00000611776 NYXQ9GZU5 481 aa8.3□□□□□ -1.08
ABCA13-208ENST00000611776 SP4Q02446 784 aa8.29□□□□□ -1.08
ABCA13-208ENST00000611776 DIAPH3Q9NSV4 1193 aa8.29□□□□□ -1.08
ABCA13-208ENST00000611776 ZYXQ15942 572 aaKnown RBP8.29□□□□□ -1.08
ABCA13-208ENST00000611776 CUL5Q93034 780 aa8.29□□□□□ -1.08
ABCA13-208ENST00000611776 PRIM1P49642 420 aaKnown RBP8.29□□□□□ -1.08
ABCA13-208ENST00000611776 ZNF157P51786 506 aaPredicted RBP8.29□□□□□ -1.08
ABCA13-208ENST00000611776 CDC5LQ99459 802 aaKnown RBP8.29□□□□□ -1.08
ABCA13-208ENST00000611776 SAMM50Q9Y512 469 aa8.29□□□□□ -1.08
ABCA13-208ENST00000611776 SYNJ1O43426 1573 aa8.29□□□□□ -1.08
ABCA13-208ENST00000611776 ATP2B1P20020 1258 aa8.29□□□□□ -1.08
ABCA13-208ENST00000611776 RRAGCQ9HB90 399 aa8.29□□□□□ -1.08
ABCA13-208ENST00000611776 IFIT1P09914 478 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms