RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GPT2Q8TD30 523 aa25.05■■□□□ 1.6
SSBP3-216ENST00000610401 ANO2Q9NQ90 1003 aa25.05■■□□□ 1.6
SSBP3-216ENST00000610401 FAM135BQ49AJ0 1406 aa25.05■■□□□ 1.6
SSBP3-216ENST00000610401 NUTM2GQ5VZR2 741 aa25.04■■□□□ 1.6
SSBP3-216ENST00000610401 FRMPD1Q5SYB0 1578 aa25.04■■□□□ 1.6
SSBP3-216ENST00000610401 ZNF853P0CG23 659 aa25.04■■□□□ 1.6
SSBP3-216ENST00000610401 PNPLA6Q8IY17 1366 aa25.04■■□□□ 1.6
SSBP3-216ENST00000610401 ARHGEF28Q8N1W1 1705 aaKnown RBP25.03■■□□□ 1.6
SSBP3-216ENST00000610401 ZC3H13Q5T200 1668 aaKnown RBP25.03■■□□□ 1.6
SSBP3-216ENST00000610401 CCDC173Q0VFZ6 552 aa25.03■■□□□ 1.6
SSBP3-216ENST00000610401 NEXMIFQ5QGS0 1516 aa25.02■■□□□ 1.6
SSBP3-216ENST00000610401 PLCB2Q00722 1185 aa25.02■■□□□ 1.6
SSBP3-216ENST00000610401 ANKRD44Q8N8A2 993 aa25.02■■□□□ 1.6
SSBP3-216ENST00000610401 IL1RAPL2Q9NP60 686 aa25.02■■□□□ 1.6
SSBP3-216ENST00000610401 ARAP3Q8WWN8 1544 aa25.02■■□□□ 1.6
SSBP3-216ENST00000610401 EIF4A2Q14240 407 aaKnown RBP25.01■■□□□ 1.59
SSBP3-216ENST00000610401 NCBP3Q53F19 620 aaKnown RBP25.01■■□□□ 1.59
SSBP3-216ENST00000610401 ZDHHC9Q9Y397 364 aa25.01■■□□□ 1.59
SSBP3-216ENST00000610401 PTPRMP28827 1452 aa25.01■■□□□ 1.59
SSBP3-216ENST00000610401 LTV1Q96GA3 475 aaPredicted RBP25.01■■□□□ 1.59
SSBP3-216ENST00000610401 NUCB2P80303 420 aa25.01■■□□□ 1.59
SSBP3-216ENST00000610401 TMEM63CQ9P1W3 806 aa25.01■■□□□ 1.59
SSBP3-216ENST00000610401 PALD1Q9ULE6 856 aa25.01■■□□□ 1.59
SSBP3-216ENST00000610401 WASLO00401 505 aaPredicted RBP25■■□□□ 1.59
SSBP3-216ENST00000610401 ZSCAN30Q86W11 494 aa25■■□□□ 1.59
SSBP3-216ENST00000610401 LMOD3Q0VAK6 560 aa25■■□□□ 1.59
SSBP3-216ENST00000610401 GLIPR1L2Q4G1C9 344 aa25■■□□□ 1.59
SSBP3-216ENST00000610401 SIGLEC1Q9BZZ2 1709 aa25■■□□□ 1.59
SSBP3-216ENST00000610401 TSPYL4Q9UJ04 414 aa24.99■■□□□ 1.59
SSBP3-216ENST00000610401 RIMS2Q9UQ26 1411 aa24.99■■□□□ 1.59
SSBP3-216ENST00000610401 PTMAP06454 111 aaKnown RBP24.98■■□□□ 1.59
SSBP3-216ENST00000610401 CYB5RLQ6IPT4 315 aa24.98■■□□□ 1.59
SSBP3-216ENST00000610401 ZMYND15Q9H091 742 aa24.98■■□□□ 1.59
SSBP3-216ENST00000610401 ERC2O15083 957 aa24.97■■□□□ 1.59
SSBP3-216ENST00000610401 FKBP5Q13451 457 aaPredicted RBP24.97■■□□□ 1.59
SSBP3-216ENST00000610401 LMTK2Q8IWU2 1503 aa24.96■■□□□ 1.59
SSBP3-216ENST00000610401 DDX54Q8TDD1 881 aaKnown RBP24.96■■□□□ 1.59
SSBP3-216ENST00000610401 TMX3Q96JJ7 454 aa24.96■■□□□ 1.59
SSBP3-216ENST00000610401 REC8O95072 547 aa24.95■■□□□ 1.59
SSBP3-216ENST00000610401 PTCH1Q13635 1447 aa24.95■■□□□ 1.59
SSBP3-216ENST00000610401 ZNF830Q96NB3 372 aaPredicted RBP24.95■■□□□ 1.58
SSBP3-216ENST00000610401 RTF1Q92541 710 aaKnown RBP24.95■■□□□ 1.58
SSBP3-216ENST00000610401 ISY1Q9ULR0 285 aaKnown RBP24.95■■□□□ 1.58
SSBP3-216ENST00000610401 PDE1AP54750 535 aa24.94■■□□□ 1.58
SSBP3-216ENST00000610401 BRPF1P55201 1214 aaPredicted RBP24.94■■□□□ 1.58
SSBP3-216ENST00000610401 NUTM1Q86Y26 1132 aa24.94■■□□□ 1.58
SSBP3-216ENST00000610401 CCDC61Q9Y6R9 512 aa24.94■■□□□ 1.58
SSBP3-216ENST00000610401 MED14O60244 1454 aa24.94■■□□□ 1.58
SSBP3-216ENST00000610401 CFAP74Q9C0B2 1584 aa24.93■■□□□ 1.58
SSBP3-216ENST00000610401 PNMA6EA0A0J9YXQ4 647 aa24.93■■□□□ 1.58
SSBP3-216ENST00000610401 UNC5CLQ8IV45 518 aa24.93■■□□□ 1.58
SSBP3-216ENST00000610401 RPAP2Q8IXW5 612 aaPredicted RBP24.93■■□□□ 1.58
SSBP3-216ENST00000610401 RTL1A6NKG5 1358 aa24.93■■□□□ 1.58
SSBP3-216ENST00000610401 JARID2Q92833 1246 aaPredicted RBP24.93■■□□□ 1.58
SSBP3-216ENST00000610401 OSCARQ8IYS5 282 aa24.92■■□□□ 1.58
SSBP3-216ENST00000610401 NEURL4Q96JN8 1562 aa24.91■■□□□ 1.58
SSBP3-216ENST00000610401 USP32Q8NFA0 1604 aa24.91■■□□□ 1.58
SSBP3-216ENST00000610401 PTMSP20962 102 aa24.91■■□□□ 1.58
SSBP3-216ENST00000610401 RRP9O43818 475 aaKnown RBP24.9■■□□□ 1.58
SSBP3-216ENST00000610401 GADD45BO75293 160 aaPredicted RBP24.9■■□□□ 1.58
SSBP3-216ENST00000610401 DNTTIP2Q5QJE6 756 aaKnown RBP24.9■■□□□ 1.58
SSBP3-216ENST00000610401 C14orf37Q86TY3 774 aa24.9■■□□□ 1.58
SSBP3-216ENST00000610401 ZFYVE9O95405 1425 aa24.9■■□□□ 1.58
SSBP3-216ENST00000610401 PIK3C2BO00750 1634 aa24.89■■□□□ 1.58
SSBP3-216ENST00000610401 MLH3Q9UHC1 1453 aa24.89■■□□□ 1.58
SSBP3-216ENST00000610401 PPP1R9BQ96SB3 815 aa24.89■■□□□ 1.57
SSBP3-216ENST00000610401 IL25Q9H293 177 aa24.89■■□□□ 1.57
SSBP3-216ENST00000610401 METP08581 1390 aa24.89■■□□□ 1.57
SSBP3-216ENST00000610401 MYO5BQ9ULV0 1848 aa24.88■■□□□ 1.57
SSBP3-216ENST00000610401 HMMRO75330 724 aa24.88■■□□□ 1.57
SSBP3-216ENST00000610401 CPA1P15085 419 aa24.88■■□□□ 1.57
SSBP3-216ENST00000610401 MTHFSDQ2M296 383 aaKnown RBP24.88■■□□□ 1.57
SSBP3-216ENST00000610401 CHMP3Q9Y3E7 222 aa24.88■■□□□ 1.57
SSBP3-216ENST00000610401 MAP2P11137 1827 aaKnown RBP24.87■■□□□ 1.57
SSBP3-216ENST00000610401 CHL1O00533 1208 aa24.87■■□□□ 1.57
SSBP3-216ENST00000610401 EIF2S2P20042 333 aaKnown RBP24.87■■□□□ 1.57
SSBP3-216ENST00000610401 TSC1Q92574 1164 aa24.87■■□□□ 1.57
SSBP3-216ENST00000610401 SLC26A8Q96RN1 970 aa24.87■■□□□ 1.57
SSBP3-216ENST00000610401 ESF1Q9H501 851 aaKnown RBP24.87■■□□□ 1.57
SSBP3-216ENST00000610401 ARHGEF40Q8TER5 1519 aa24.87■■□□□ 1.57
SSBP3-216ENST00000610401 C17orf53Q8N3J3 647 aaPredicted RBP24.87■■□□□ 1.57
SSBP3-216ENST00000610401 PIK3R4Q99570 1358 aa24.87■■□□□ 1.57
SSBP3-216ENST00000610401 HECW2Q9P2P5 1572 aa24.87■■□□□ 1.57
SSBP3-216ENST00000610401 FAM177BA6PVY3 158 aa24.87■■□□□ 1.57
SSBP3-216ENST00000610401 LRRFIP2Q9Y608 721 aaKnown RBP24.86■■□□□ 1.57
SSBP3-216ENST00000610401 CYP2E1P05181 493 aaPredicted RBP24.86■■□□□ 1.57
SSBP3-216ENST00000610401 STK31Q9BXU1 1019 aa24.86■■□□□ 1.57
SSBP3-216ENST00000610401 PRR36Q9H6K5 1346 aa24.85■■□□□ 1.57
SSBP3-216ENST00000610401 ATP10DQ9P241 1426 aa24.85■■□□□ 1.57
SSBP3-216ENST00000610401 ZNF445P59923 1031 aa24.85■■□□□ 1.57
SSBP3-216ENST00000610401 FAM69CQ0P6D2 419 aa24.85■■□□□ 1.57
SSBP3-216ENST00000610401 USHBP1Q8N6Y0 703 aa24.85■■□□□ 1.57
SSBP3-216ENST00000610401 ANXA1P04083 346 aa24.84■■□□□ 1.57
SSBP3-216ENST00000610401 GNAI2P04899 355 aa24.84■■□□□ 1.57
SSBP3-216ENST00000610401 PKNOX2Q96KN3 472 aa24.84■■□□□ 1.57
SSBP3-216ENST00000610401 LRRCC1Q9C099 1032 aa24.84■■□□□ 1.57
SSBP3-216ENST00000610401 MX1P20591 662 aa24.83■■□□□ 1.57
SSBP3-216ENST00000610401 AMPHP49418 695 aa24.83■■□□□ 1.57
SSBP3-216ENST00000610401 CWC22Q9HCG8 908 aaKnown RBP24.83■■□□□ 1.57
SSBP3-216ENST00000610401 ACEP12821 1306 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms