RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 PPIP5K1Q6PFW1 1433 aa6.67□□□□□ -1.34
SSX9-202ENST00000608568 PAK3O75914 559 aaPredicted RBP6.67□□□□□ -1.34
SSX9-202ENST00000608568 NUTM2GQ5VZR2 741 aa6.67□□□□□ -1.34
SSX9-202ENST00000608568 DEFB132Q7Z7B7 95 aa6.67□□□□□ -1.34
SSX9-202ENST00000608568 ARHGEF1Q92888 912 aaKnown RBP6.67□□□□□ -1.34
SSX9-202ENST00000608568 UTRNP46939 3433 aa6.67□□□□□ -1.34
SSX9-202ENST00000608568 DOT1LQ8TEK3 1739 aa6.67□□□□□ -1.34
SSX9-202ENST00000608568 BLMP54132 1417 aaPredicted RBP6.67□□□□□ -1.34
SSX9-202ENST00000608568 NHSQ6T4R5 1651 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 FAM208AQ9UK61 1670 aaKnown RBP6.66□□□□□ -1.34
SSX9-202ENST00000608568 PSME1Q06323 249 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 CHRNA2Q15822 529 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 VPS72Q15906 364 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 FAM182BQ5T319 152 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 SEPT12Q8IYM1 358 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 NUDT16Q96DE0 195 aaKnown RBP6.66□□□□□ -1.34
SSX9-202ENST00000608568 ZMYND15Q9H091 742 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 SLC24A3Q9HC58 644 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 CENPJQ9HC77 1338 aaPredicted RBP6.66□□□□□ -1.34
SSX9-202ENST00000608568 USP6P35125 1406 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 SSH2Q76I76 1423 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 COL5A2P05997 1499 aaPredicted RBP6.66□□□□□ -1.34
SSX9-202ENST00000608568 CD163L1Q9NR16 1453 aa6.66□□□□□ -1.34
SSX9-202ENST00000608568 MAP2P11137 1827 aaKnown RBP6.65□□□□□ -1.34
SSX9-202ENST00000608568 MS4A1P11836 297 aa6.65□□□□□ -1.34
SSX9-202ENST00000608568 SIN3AQ96ST3 1273 aa6.65□□□□□ -1.34
SSX9-202ENST00000608568 CDK19Q9BWU1 502 aa6.65□□□□□ -1.34
SSX9-202ENST00000608568 BTG4Q9NY30 223 aa6.65□□□□□ -1.34
SSX9-202ENST00000608568 USP19O94966 1318 aa6.65□□□□□ -1.35
SSX9-202ENST00000608568 ACEP12821 1306 aa6.65□□□□□ -1.35
SSX9-202ENST00000608568 ZBED9Q6R2W3 1325 aa6.65□□□□□ -1.35
SSX9-202ENST00000608568 GPRASP1Q5JY77 1395 aa6.65□□□□□ -1.35
SSX9-202ENST00000608568 ITGB4P16144 1822 aa6.64□□□□□ -1.35
SSX9-202ENST00000608568 TCERG1O14776 1098 aaKnown RBP6.64□□□□□ -1.35
SSX9-202ENST00000608568 FAM98CQ17RN3 349 aaKnown RBP6.64□□□□□ -1.35
SSX9-202ENST00000608568 SPATA31A5Q5VU36 1347 aa6.64□□□□□ -1.35
SSX9-202ENST00000608568 SPATA31A7Q8IWB4 1347 aa6.64□□□□□ -1.35
SSX9-202ENST00000608568 ANKRD26Q9UPS8 1709 aa6.64□□□□□ -1.35
SSX9-202ENST00000608568 TAF1LQ8IZX4 1826 aa6.64□□□□□ -1.35
SSX9-202ENST00000608568 DISP2A7MBM2 1401 aa6.63□□□□□ -1.35
SSX9-202ENST00000608568 MNX1P50219 401 aaPredicted RBP6.63□□□□□ -1.35
SSX9-202ENST00000608568 DDX10Q13206 875 aaKnown RBP6.63□□□□□ -1.35
SSX9-202ENST00000608568 PAPPAQ13219 1627 aa6.63□□□□□ -1.35
SSX9-202ENST00000608568 CHD4Q14839 1912 aa6.63□□□□□ -1.35
SSX9-202ENST00000608568 QSER1Q2KHR3 1735 aa6.63□□□□□ -1.35
SSX9-202ENST00000608568 NBPF8Q3BBV2 869 aa6.63□□□□□ -1.35
SSX9-202ENST00000608568 RNF123Q5XPI4 1314 aa6.63□□□□□ -1.35
SSX9-202ENST00000608568 NGDNQ8NEJ9 315 aaKnown RBP6.63□□□□□ -1.35
SSX9-202ENST00000608568 L3MBTL2Q969R5 705 aa6.63□□□□□ -1.35
SSX9-202ENST00000608568 CABP2Q9NPB3 220 aa6.63□□□□□ -1.35
SSX9-202ENST00000608568 PCDH10Q9P2E7 1040 aa6.63□□□□□ -1.35
SSX9-202ENST00000608568 CCDC9Q9Y3X0 531 aaKnown RBP6.63□□□□□ -1.35
SSX9-202ENST00000608568 LY75O60449 1722 aa6.62□□□□□ -1.35
SSX9-202ENST00000608568 TOGARAM1Q9Y4F4 1720 aa6.62□□□□□ -1.35
SSX9-202ENST00000608568 CPDO75976 1380 aa6.62□□□□□ -1.35
SSX9-202ENST00000608568 SPATA31A1Q5TZJ5 1347 aa6.62□□□□□ -1.35
SSX9-202ENST00000608568 POTEMA6NI47 508 aa6.62□□□□□ -1.35
SSX9-202ENST00000608568 ONECUT3O60422 494 aaPredicted RBP6.62□□□□□ -1.35
SSX9-202ENST00000608568 PYGBP11216 843 aa6.62□□□□□ -1.35
SSX9-202ENST00000608568 ZC3H6P61129 1189 aaKnown RBP6.62□□□□□ -1.35
SSX9-202ENST00000608568 HSP90AA2PQ14568 343 aaPredicted RBP6.62□□□□□ -1.35
SSX9-202ENST00000608568 RASEFQ8IZ41 740 aa6.62□□□□□ -1.35
SSX9-202ENST00000608568 PRDM11Q9NQV5 511 aa6.62□□□□□ -1.35
SSX9-202ENST00000608568 CREBZFQ9NS37 354 aa6.62□□□□□ -1.35
SSX9-202ENST00000608568 COL24A1Q17RW2 1714 aa6.62□□□□□ -1.35
SSX9-202ENST00000608568 CPSF1Q10570 1443 aaKnown RBP6.61□□□□□ -1.35
SSX9-202ENST00000608568 SMG6Q86US8 1419 aaKnown RBP6.61□□□□□ -1.35
SSX9-202ENST00000608568 PLEKHG3A1L390 1219 aa6.61□□□□□ -1.35
SSX9-202ENST00000608568 TESPA1A2RU30 521 aaPredicted RBP6.61□□□□□ -1.35
SSX9-202ENST00000608568 HNRNPUQ00839 825 aaKnown RBP eCLIP6.61□□□□□ -1.35
SSX9-202ENST00000608568 L1TD1Q5T7N2 865 aaKnown RBP6.61□□□□□ -1.35
SSX9-202ENST00000608568 KRT27Q7Z3Y8 459 aa6.61□□□□□ -1.35
SSX9-202ENST00000608568 STRN4Q9NRL3 753 aa6.61□□□□□ -1.35
SSX9-202ENST00000608568 FARP1Q9Y4F1 1045 aaPredicted RBP6.61□□□□□ -1.35
SSX9-202ENST00000608568 ABCC6O95255 1503 aa6.6□□□□□ -1.35
SSX9-202ENST00000608568 ROCK2O75116 1388 aaKnown RBP6.6□□□□□ -1.35
SSX9-202ENST00000608568 A0A0G2JS52 829 aa6.6□□□□□ -1.35
SSX9-202ENST00000608568 PSDA5PKW4 1024 aaPredicted RBP6.6□□□□□ -1.35
SSX9-202ENST00000608568 ZMYND10O75800 440 aa6.6□□□□□ -1.35
SSX9-202ENST00000608568 E2F4Q16254 413 aa6.6□□□□□ -1.35
SSX9-202ENST00000608568 LARP1Q6PKG0 1096 aaKnown RBP6.6□□□□□ -1.35
SSX9-202ENST00000608568 HSP90AA1P07900 732 aaKnown RBP6.59□□□□□ -1.35
SSX9-202ENST00000608568 SRPK2P78362 688 aaKnown RBP6.59□□□□□ -1.35
SSX9-202ENST00000608568 POTEGQ6S5H5 508 aa6.59□□□□□ -1.35
SSX9-202ENST00000608568 ZRANB1Q9UGI0 708 aa6.59□□□□□ -1.35
SSX9-202ENST00000608568 CCDC61Q9Y6R9 512 aa6.59□□□□□ -1.35
SSX9-202ENST00000608568 PKD1L3Q7Z443 1732 aa6.59□□□□□ -1.36
SSX9-202ENST00000608568 SEMA3EO15041 775 aa6.58□□□□□ -1.36
SSX9-202ENST00000608568 NCLP19338 710 aaKnown RBP6.58□□□□□ -1.36
SSX9-202ENST00000608568 CALD1Q05682 793 aaKnown RBP6.58□□□□□ -1.36
SSX9-202ENST00000608568 EN1Q05925 392 aaPredicted RBP6.58□□□□□ -1.36
SSX9-202ENST00000608568 SMYD5Q6GMV2 418 aa6.58□□□□□ -1.36
SSX9-202ENST00000608568 PTF1AQ7RTS3 328 aa6.58□□□□□ -1.36
SSX9-202ENST00000608568 OTUD5Q96G74 571 aa6.58□□□□□ -1.36
SSX9-202ENST00000608568 STAC3Q96MF2 364 aa6.58□□□□□ -1.36
SSX9-202ENST00000608568 CABP1Q9NZU7 370 aa6.58□□□□□ -1.36
SSX9-202ENST00000608568 OVOS2A0A0J9YW53 1432 aa6.58□□□□□ -1.36
SSX9-202ENST00000608568 CRB1P82279 1406 aa6.58□□□□□ -1.36
SSX9-202ENST00000608568 OVOS2Q6IE36 1432 aa6.58□□□□□ -1.36
SSX9-202ENST00000608568 SBNO2Q9Y2G9 1366 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms