RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 TNRQ92752 1358 aa12.52□□□□□ -0.41
CTCFL-216ENST00000608263 GNAI3P08754 354 aa12.52□□□□□ -0.41
CTCFL-216ENST00000608263 CWC27Q6UX04 472 aaKnown RBP12.52□□□□□ -0.41
CTCFL-216ENST00000608263 SPC24Q8NBT2 197 aa12.52□□□□□ -0.41
CTCFL-216ENST00000608263 GPATCH3Q96I76 525 aa12.52□□□□□ -0.41
CTCFL-216ENST00000608263 SAMD9LQ8IVG5 1584 aa12.51□□□□□ -0.41
CTCFL-216ENST00000608263 WASLO00401 505 aaPredicted RBP12.51□□□□□ -0.41
CTCFL-216ENST00000608263 NEXNQ0ZGT2 675 aa12.51□□□□□ -0.41
CTCFL-216ENST00000608263 ERCC6L2Q5T890 1561 aa12.51□□□□□ -0.41
CTCFL-216ENST00000608263 CCDC30Q5VVM6 783 aa12.51□□□□□ -0.41
CTCFL-216ENST00000608263 ZSCAN30Q86W11 494 aa12.51□□□□□ -0.41
CTCFL-216ENST00000608263 TTC22Q5TAA0 569 aa12.51□□□□□ -0.41
CTCFL-216ENST00000608263 PTCD1O75127 700 aaKnown RBP12.5□□□□□ -0.41
CTCFL-216ENST00000608263 CD2BP2O95400 341 aaKnown RBP12.5□□□□□ -0.41
CTCFL-216ENST00000608263 CABLES1Q8TDN4 633 aa12.5□□□□□ -0.41
CTCFL-216ENST00000608263 TMX4Q9H1E5 349 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-216ENST00000608263 PPP1R1BQ9UD71 204 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-216ENST00000608263 INSRP06213 1382 aa12.5□□□□□ -0.41
CTCFL-216ENST00000608263 ABCC2Q92887 1545 aa12.5□□□□□ -0.41
CTCFL-216ENST00000608263 SRGAP3O43295 1099 aa12.5□□□□□ -0.41
CTCFL-216ENST00000608263 ANXA1P04083 346 aa12.5□□□□□ -0.41
CTCFL-216ENST00000608263 ZNF592Q92610 1267 aa12.5□□□□□ -0.41
CTCFL-216ENST00000608263 SIL1Q9H173 461 aa12.5□□□□□ -0.41
CTCFL-216ENST00000608263 TSPY26PQ9H489 355 aa12.5□□□□□ -0.41
CTCFL-216ENST00000608263 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
CTCFL-216ENST00000608263 CLASP1Q7Z460 1538 aa12.5□□□□□ -0.41
CTCFL-216ENST00000608263 ZKSCAN1P17029 563 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-216ENST00000608263 TATP17735 454 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-216ENST00000608263 FERMT3Q86UX7 667 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 STK3Q13188 491 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 RIC3Q7Z5B4 369 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 PLEKHM2Q8IWE5 1019 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 IL16Q14005 1332 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 CLCN1P35523 988 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 GAS2L3Q86XJ1 694 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 LRRFIP2Q9Y608 721 aaKnown RBP12.49□□□□□ -0.41
CTCFL-216ENST00000608263 ATP10AO60312 1499 aa12.49□□□□□ -0.41
CTCFL-216ENST00000608263 H3BQV1 296 aa12.48□□□□□ -0.41
CTCFL-216ENST00000608263 MBD3O95983 291 aa12.48□□□□□ -0.41
CTCFL-216ENST00000608263 CCT4P50991 539 aaKnown RBP12.48□□□□□ -0.41
CTCFL-216ENST00000608263 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
CTCFL-216ENST00000608263 BICD2Q8TD16 824 aa12.48□□□□□ -0.41
CTCFL-216ENST00000608263 ERVK-7P63135 1459 aa12.48□□□□□ -0.41
CTCFL-216ENST00000608263 MAST1Q9Y2H9 1570 aa12.48□□□□□ -0.41
CTCFL-216ENST00000608263 MX1P20591 662 aa12.48□□□□□ -0.41
CTCFL-216ENST00000608263 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
CTCFL-216ENST00000608263 UBAP1LF5GYI3 381 aa12.48□□□□□ -0.41
CTCFL-216ENST00000608263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTCFL-216ENST00000608263 KCNA6P17658 529 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 NGLY1Q96IV0 654 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 TOMM22Q9NS69 142 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 ATP6V1DQ9Y5K8 247 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 MYL6BP14649 208 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 PRIM1P49642 420 aaKnown RBP12.47□□□□□ -0.41
CTCFL-216ENST00000608263 ZSCAN23Q3MJ62 389 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 PLEKHO1Q53GL0 409 aaPredicted RBP12.47□□□□□ -0.41
CTCFL-216ENST00000608263 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
CTCFL-216ENST00000608263 SNX21Q969T3 373 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 ZNF518AQ6AHZ1 1483 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 UQCRHLA0A096LP55 91 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 UQCRHP07919 91 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 PKP1Q13835 747 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 KLHL40Q2TBA0 621 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 CCDC39Q9UFE4 941 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 NSD2O96028 1365 aa12.47□□□□□ -0.41
CTCFL-216ENST00000608263 G3BP1Q13283 466 aaKnown RBP eCLIP12.46□□□□□ -0.41
CTCFL-216ENST00000608263 RUFY2Q8WXA3 655 aa12.46□□□□□ -0.41
CTCFL-216ENST00000608263 G2E3Q7L622 706 aa12.46□□□□□ -0.41
CTCFL-216ENST00000608263 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
CTCFL-216ENST00000608263 FAM184AQ8NB25 1140 aa12.46□□□□□ -0.41
CTCFL-216ENST00000608263 ZNF830Q96NB3 372 aaPredicted RBP12.46□□□□□ -0.41
CTCFL-216ENST00000608263 ZMYM3Q14202 1370 aa12.46□□□□□ -0.41
CTCFL-216ENST00000608263 CNTROBQ8N137 903 aa12.46□□□□□ -0.42
CTCFL-216ENST00000608263 ACEP12821 1306 aa12.46□□□□□ -0.42
CTCFL-216ENST00000608263 RBM25P49756 843 aaKnown RBP12.46□□□□□ -0.42
CTCFL-216ENST00000608263 TMX3Q96JJ7 454 aa12.46□□□□□ -0.42
CTCFL-216ENST00000608263 SRCIN1Q9C0H9 1055 aa12.46□□□□□ -0.42
CTCFL-216ENST00000608263 PRDM15P57071 1507 aaPredicted RBP12.45□□□□□ -0.42
CTCFL-216ENST00000608263 ABCA8O94911 1581 aa12.45□□□□□ -0.42
CTCFL-216ENST00000608263 KDM4AO75164 1064 aa12.45□□□□□ -0.42
CTCFL-216ENST00000608263 CSPP1Q1MSJ5 1256 aa12.45□□□□□ -0.42
CTCFL-216ENST00000608263 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
CTCFL-216ENST00000608263 USP25Q9UHP3 1055 aa12.45□□□□□ -0.42
CTCFL-216ENST00000608263 CDC42BPAQ5VT25 1732 aa12.45□□□□□ -0.42
CTCFL-216ENST00000608263 CABP4P57796 275 aa12.45□□□□□ -0.42
CTCFL-216ENST00000608263 CCDC83Q8IWF9 413 aa12.45□□□□□ -0.42
CTCFL-216ENST00000608263 JAKMIP1Q96N16 626 aaKnown RBP12.44□□□□□ -0.42
CTCFL-216ENST00000608263 FSD1Q9BTV5 496 aa12.44□□□□□ -0.42
CTCFL-216ENST00000608263 DNAJC5Q9H3Z4 198 aa12.44□□□□□ -0.42
CTCFL-216ENST00000608263 DCTPP1Q9H773 170 aa12.44□□□□□ -0.42
CTCFL-216ENST00000608263 GOLGA6L6A8MZA4 724 aa12.44□□□□□ -0.42
CTCFL-216ENST00000608263 TPM2P07951 284 aa12.44□□□□□ -0.42
CTCFL-216ENST00000608263 PDE1AP54750 535 aa12.44□□□□□ -0.42
CTCFL-216ENST00000608263 FLIIQ13045 1269 aa12.44□□□□□ -0.42
CTCFL-216ENST00000608263 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
CTCFL-216ENST00000608263 TTC37Q6PGP7 1564 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms