RNA–Protein interactions for RNA: ENST00000595936.1

LRMDA-211, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-211ENST00000595936 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
LRMDA-211ENST00000595936 DDX54Q8TDD1 881 aaKnown RBP16.56■□□□□ 0.24
LRMDA-211ENST00000595936 LTN1O94822 1766 aa16.56■□□□□ 0.24
LRMDA-211ENST00000595936 KAT6BQ8WYB5 2073 aa16.55■□□□□ 0.24
LRMDA-211ENST00000595936 FAM208AQ9UK61 1670 aaKnown RBP16.54■□□□□ 0.24
LRMDA-211ENST00000595936 PELP1Q8IZL8 1130 aaKnown RBP16.54■□□□□ 0.24
LRMDA-211ENST00000595936 COL24A1Q17RW2 1714 aa16.53■□□□□ 0.24
LRMDA-211ENST00000595936 SYTL4Q96C24 671 aaPredicted RBP16.53■□□□□ 0.24
LRMDA-211ENST00000595936 PRIM1P49642 420 aaKnown RBP16.52■□□□□ 0.24
LRMDA-211ENST00000595936 SIN3AQ96ST3 1273 aa16.52■□□□□ 0.24
LRMDA-211ENST00000595936 CARD11Q9BXL7 1154 aa16.52■□□□□ 0.24
LRMDA-211ENST00000595936 SLC12A5Q9H2X9 1139 aa16.52■□□□□ 0.24
LRMDA-211ENST00000595936 CEP350Q5VT06 3117 aa16.52■□□□□ 0.24
LRMDA-211ENST00000595936 A0A1W2PP64 1363 aa16.51■□□□□ 0.23
LRMDA-211ENST00000595936 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
LRMDA-211ENST00000595936 CGNL1Q0VF96 1302 aa16.5■□□□□ 0.23
LRMDA-211ENST00000595936 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
LRMDA-211ENST00000595936 NEUROD1Q13562 356 aa16.5■□□□□ 0.23
LRMDA-211ENST00000595936 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
LRMDA-211ENST00000595936 CCNL1Q9UK58 526 aaPredicted RBP16.5■□□□□ 0.23
LRMDA-211ENST00000595936 USP47Q96K76 1375 aa16.5■□□□□ 0.23
LRMDA-211ENST00000595936 C1QBPQ07021 282 aaKnown RBP16.49■□□□□ 0.23
LRMDA-211ENST00000595936 IFFO2Q5TF58 517 aa16.49■□□□□ 0.23
LRMDA-211ENST00000595936 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
LRMDA-211ENST00000595936 COG3Q96JB2 828 aa16.49■□□□□ 0.23
LRMDA-211ENST00000595936 FLAD1Q8NFF5 587 aa16.48■□□□□ 0.23
LRMDA-211ENST00000595936 NSD2O96028 1365 aa16.48■□□□□ 0.23
LRMDA-211ENST00000595936 HOXC9P31274 260 aa16.47■□□□□ 0.23
LRMDA-211ENST00000595936 AMPHP49418 695 aa16.47■□□□□ 0.23
LRMDA-211ENST00000595936 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
LRMDA-211ENST00000595936 LY75O60449 1722 aa16.47■□□□□ 0.23
LRMDA-211ENST00000595936 MAP3K19Q56UN5 1328 aa16.46■□□□□ 0.23
LRMDA-211ENST00000595936 KCNQ4P56696 695 aa16.46■□□□□ 0.23
LRMDA-211ENST00000595936 RTL1A6NKG5 1358 aa16.46■□□□□ 0.23
LRMDA-211ENST00000595936 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
LRMDA-211ENST00000595936 YBX3P16989 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
LRMDA-211ENST00000595936 COL23A1Q86Y22 540 aaPredicted RBP16.45■□□□□ 0.22
LRMDA-211ENST00000595936 DOT1LQ8TEK3 1739 aa16.44■□□□□ 0.22
LRMDA-211ENST00000595936 TUBGCP6Q96RT7 1819 aa16.43■□□□□ 0.22
LRMDA-211ENST00000595936 RAPGEF4Q8WZA2 1011 aa16.43■□□□□ 0.22
LRMDA-211ENST00000595936 MEGF6O75095 1541 aa16.43■□□□□ 0.22
LRMDA-211ENST00000595936 SMG6Q86US8 1419 aaKnown RBP16.43■□□□□ 0.22
LRMDA-211ENST00000595936 GPBP1L1Q9HC44 474 aaPredicted RBP16.42■□□□□ 0.22
LRMDA-211ENST00000595936 ATP10DQ9P241 1426 aa16.42■□□□□ 0.22
LRMDA-211ENST00000595936 KCNA4P22459 653 aa16.41■□□□□ 0.22
LRMDA-211ENST00000595936 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
LRMDA-211ENST00000595936 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
LRMDA-211ENST00000595936 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
LRMDA-211ENST00000595936 TATP17735 454 aaPredicted RBP16.39■□□□□ 0.21
LRMDA-211ENST00000595936 NBPF6Q5VWK0 638 aa16.39■□□□□ 0.21
LRMDA-211ENST00000595936 MSL1Q68DK7 614 aa16.39■□□□□ 0.21
LRMDA-211ENST00000595936 SMARCC1Q92922 1105 aaPredicted RBP16.39■□□□□ 0.21
LRMDA-211ENST00000595936 NBPF4Q96M43 638 aa16.39■□□□□ 0.21
LRMDA-211ENST00000595936 PALLDQ8WX93 1383 aa16.38■□□□□ 0.21
LRMDA-211ENST00000595936 KIF24Q5T7B8 1368 aa16.38■□□□□ 0.21
LRMDA-211ENST00000595936 TONSLQ96HA7 1378 aa16.38■□□□□ 0.21
LRMDA-211ENST00000595936 HSPA6P17066 643 aa16.37■□□□□ 0.21
LRMDA-211ENST00000595936 TESK2Q96S53 571 aa16.37■□□□□ 0.21
LRMDA-211ENST00000595936 ADCY9O60503 1353 aa16.37■□□□□ 0.21
LRMDA-211ENST00000595936 AK7Q96M32 723 aa16.36■□□□□ 0.21
LRMDA-211ENST00000595936 C5P01031 1676 aa16.36■□□□□ 0.21
LRMDA-211ENST00000595936 INSRP06213 1382 aa16.36■□□□□ 0.21
LRMDA-211ENST00000595936 RRS1Q15050 365 aaKnown RBP16.35■□□□□ 0.21
LRMDA-211ENST00000595936 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
LRMDA-211ENST00000595936 ST20-MTHFSA0A0A6YYL1 179 aa16.34■□□□□ 0.21
LRMDA-211ENST00000595936 FYB1O15117 783 aa16.34■□□□□ 0.21
LRMDA-211ENST00000595936 FBLN1P23142 703 aa16.34■□□□□ 0.21
LRMDA-211ENST00000595936 USHBP1Q8N6Y0 703 aa16.34■□□□□ 0.21
LRMDA-211ENST00000595936 FLT4P35916 1363 aa16.34■□□□□ 0.21
LRMDA-211ENST00000595936 RGPD2P0DJD1 1756 aa16.32■□□□□ 0.2
LRMDA-211ENST00000595936 SSFA2P28290 1259 aa16.32■□□□□ 0.2
LRMDA-211ENST00000595936 GGNBP2Q9H3C7 697 aa16.32■□□□□ 0.2
LRMDA-211ENST00000595936 IGSF1Q8N6C5 1336 aa16.31■□□□□ 0.2
LRMDA-211ENST00000595936 CYP27B1O15528 508 aa16.31■□□□□ 0.2
LRMDA-211ENST00000595936 HSP90AB2PQ58FF8 381 aa16.31■□□□□ 0.2
LRMDA-211ENST00000595936 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
LRMDA-211ENST00000595936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.3■□□□□ 0.2
LRMDA-211ENST00000595936 TMF1P82094 1093 aa16.3■□□□□ 0.2
LRMDA-211ENST00000595936 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
LRMDA-211ENST00000595936 CDCA8Q53HL2 280 aa16.29■□□□□ 0.2
LRMDA-211ENST00000595936 ZNF526Q8TF50 670 aaPredicted RBP16.29■□□□□ 0.2
LRMDA-211ENST00000595936 TAF1LQ8IZX4 1826 aa16.29■□□□□ 0.2
LRMDA-211ENST00000595936 PHF14O94880 888 aa16.28■□□□□ 0.2
LRMDA-211ENST00000595936 PIGBQ92521 554 aa16.28■□□□□ 0.2
LRMDA-211ENST00000595936 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
LRMDA-211ENST00000595936 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
LRMDA-211ENST00000595936 SIK1P57059 783 aa16.27■□□□□ 0.2
LRMDA-211ENST00000595936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.27■□□□□ 0.2
LRMDA-211ENST00000595936 NCAPD2Q15021 1401 aa16.26■□□□□ 0.19
LRMDA-211ENST00000595936 KIF3CO14782 793 aa16.25■□□□□ 0.19
LRMDA-211ENST00000595936 APLP1P51693 650 aa16.25■□□□□ 0.19
LRMDA-211ENST00000595936 AMIGO3Q86WK7 504 aa16.25■□□□□ 0.19
LRMDA-211ENST00000595936 TMOD3Q9NYL9 352 aa16.25■□□□□ 0.19
LRMDA-211ENST00000595936 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
LRMDA-211ENST00000595936 TGFB2P61812 414 aa16.24■□□□□ 0.19
LRMDA-211ENST00000595936 LINC00116Q8NCU8 138 aa16.24■□□□□ 0.19
LRMDA-211ENST00000595936 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
LRMDA-211ENST00000595936 CICQ96RK0 1608 aaPredicted RBP16.23■□□□□ 0.19
LRMDA-211ENST00000595936 PKD1L3Q7Z443 1732 aa16.23■□□□□ 0.19
LRMDA-211ENST00000595936 TOGARAM1Q9Y4F4 1720 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms