RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 HSP90AA2PQ14568 343 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-222ENST00000584377 RGPD1P0DJD0 1748 aa16.51■□□□□ 0.23
CSNK1D-222ENST00000584377 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
CSNK1D-222ENST00000584377 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
CSNK1D-222ENST00000584377 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-222ENST00000584377 FLT4P35916 1363 aa16.5■□□□□ 0.23
CSNK1D-222ENST00000584377 INTS3Q68E01 1043 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-222ENST00000584377 SBNO1A3KN83 1393 aa16.49■□□□□ 0.23
CSNK1D-222ENST00000584377 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
CSNK1D-222ENST00000584377 DIP2AQ14689 1571 aa16.49■□□□□ 0.23
CSNK1D-222ENST00000584377 RRP9O43818 475 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-222ENST00000584377 NAP1L5Q96NT1 182 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-222ENST00000584377 AMPHP49418 695 aa16.48■□□□□ 0.23
CSNK1D-222ENST00000584377 RBM25P49756 843 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-222ENST00000584377 CRB1P82279 1406 aa16.48■□□□□ 0.23
CSNK1D-222ENST00000584377 MTHFSDQ2M296 383 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-222ENST00000584377 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-222ENST00000584377 RGS12O14924 1447 aa16.47■□□□□ 0.23
CSNK1D-222ENST00000584377 FOXO3O43524 673 aa16.47■□□□□ 0.23
CSNK1D-222ENST00000584377 PTPRCP08575 1304 aa16.46■□□□□ 0.23
CSNK1D-222ENST00000584377 HSCBQ8IWL3 235 aa16.46■□□□□ 0.23
CSNK1D-222ENST00000584377 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.23
CSNK1D-222ENST00000584377 KDRP35968 1356 aa16.46■□□□□ 0.23
CSNK1D-222ENST00000584377 HSP90AA1P07900 732 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-222ENST00000584377 EYA1Q99502 592 aa16.45■□□□□ 0.22
CSNK1D-222ENST00000584377 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
CSNK1D-222ENST00000584377 NLRP6P59044 892 aa16.45■□□□□ 0.22
CSNK1D-222ENST00000584377 L1TD1Q5T7N2 865 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-222ENST00000584377 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
CSNK1D-222ENST00000584377 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
CSNK1D-222ENST00000584377 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
CSNK1D-222ENST00000584377 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
CSNK1D-222ENST00000584377 ANKRD44Q8N8A2 993 aa16.44■□□□□ 0.22
CSNK1D-222ENST00000584377 FMN2Q9NZ56 1722 aa16.44■□□□□ 0.22
CSNK1D-222ENST00000584377 MSH6P52701 1360 aa16.44■□□□□ 0.22
CSNK1D-222ENST00000584377 GAS2L2Q8NHY3 880 aa16.44■□□□□ 0.22
CSNK1D-222ENST00000584377 FER1L4A9Z1Z3 1794 aa16.43■□□□□ 0.22
CSNK1D-222ENST00000584377 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-222ENST00000584377 ATP10DQ9P241 1426 aa16.43■□□□□ 0.22
CSNK1D-222ENST00000584377 KCNA6P17658 529 aa16.43■□□□□ 0.22
CSNK1D-222ENST00000584377 RPAP2Q8IXW5 612 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-222ENST00000584377 ANKARQ7Z5J8 1434 aa16.42■□□□□ 0.22
CSNK1D-222ENST00000584377 PIK3C2AO00443 1686 aa16.42■□□□□ 0.22
CSNK1D-222ENST00000584377 CHMP5Q9NZZ3 219 aa16.42■□□□□ 0.22
CSNK1D-222ENST00000584377 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-222ENST00000584377 CEP85Q6P2H3 762 aa16.42■□□□□ 0.22
CSNK1D-222ENST00000584377 XRN1Q8IZH2 1706 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-222ENST00000584377 PLEKHM2Q8IWE5 1019 aa16.41■□□□□ 0.22
CSNK1D-222ENST00000584377 RIMS1Q86UR5 1692 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-222ENST00000584377 RTL1A6NKG5 1358 aa16.41■□□□□ 0.22
CSNK1D-222ENST00000584377 CDC45O75419 566 aa16.41■□□□□ 0.22
CSNK1D-222ENST00000584377 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
CSNK1D-222ENST00000584377 SNX21Q969T3 373 aa16.41■□□□□ 0.22
CSNK1D-222ENST00000584377 MEIS3Q99687 375 aa16.41■□□□□ 0.22
CSNK1D-222ENST00000584377 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
CSNK1D-222ENST00000584377 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-222ENST00000584377 CLCN1P35523 988 aa16.4■□□□□ 0.22
CSNK1D-222ENST00000584377 HOXC9P31274 260 aa16.39■□□□□ 0.21
CSNK1D-222ENST00000584377 ABTB2Q8N961 1025 aa16.39■□□□□ 0.21
CSNK1D-222ENST00000584377 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-222ENST00000584377 SLC4A10Q6U841 1118 aa16.38■□□□□ 0.21
CSNK1D-222ENST00000584377 G2E3Q7L622 706 aa16.38■□□□□ 0.21
CSNK1D-222ENST00000584377 KIF2CQ99661 725 aa16.38■□□□□ 0.21
CSNK1D-222ENST00000584377 TTC22Q5TAA0 569 aa16.38■□□□□ 0.21
CSNK1D-222ENST00000584377 C16orf71Q8IYS4 520 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-222ENST00000584377 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
CSNK1D-222ENST00000584377 F6X3S4 739 aa16.37■□□□□ 0.21
CSNK1D-222ENST00000584377 MCM4P33991 863 aa16.37■□□□□ 0.21
CSNK1D-222ENST00000584377 STK31Q9BXU1 1019 aa16.37■□□□□ 0.21
CSNK1D-222ENST00000584377 NCOA3Q9Y6Q9 1424 aa16.37■□□□□ 0.21
CSNK1D-222ENST00000584377 CCT4P50991 539 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-222ENST00000584377 APBB1O00213 710 aa16.36■□□□□ 0.21
CSNK1D-222ENST00000584377 HSP90AB1P08238 724 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-222ENST00000584377 LTV1Q96GA3 475 aaPredicted RBP16.36■□□□□ 0.21
CSNK1D-222ENST00000584377 HMMRO75330 724 aa16.35■□□□□ 0.21
CSNK1D-222ENST00000584377 PLEKHG5O94827 1062 aa16.35■□□□□ 0.21
CSNK1D-222ENST00000584377 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
CSNK1D-222ENST00000584377 OTUD7AQ8TE49 926 aaPredicted RBP16.35■□□□□ 0.21
CSNK1D-222ENST00000584377 SMARCA5O60264 1052 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-222ENST00000584377 XRCC6P12956 609 aaKnown RBP eCLIP16.34■□□□□ 0.21
CSNK1D-222ENST00000584377 DDIT3P35638 169 aa16.34■□□□□ 0.21
CSNK1D-222ENST00000584377 CCDC30Q5VVM6 783 aa16.33■□□□□ 0.21
CSNK1D-222ENST00000584377 MAP3K5Q99683 1374 aa16.33■□□□□ 0.2
CSNK1D-222ENST00000584377 ARXQ96QS3 562 aa16.33■□□□□ 0.2
CSNK1D-222ENST00000584377 NWD1Q149M9 1564 aa16.33■□□□□ 0.2
CSNK1D-222ENST00000584377 PHF8Q9UPP1 1060 aa16.32■□□□□ 0.2
CSNK1D-222ENST00000584377 MARF1Q9Y4F3 1742 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-222ENST00000584377 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-222ENST00000584377 FLIIQ13045 1269 aa16.32■□□□□ 0.2
CSNK1D-222ENST00000584377 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
CSNK1D-222ENST00000584377 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-222ENST00000584377 LRRC37A3O60309 1634 aa16.32■□□□□ 0.2
CSNK1D-222ENST00000584377 FKBP5Q13451 457 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-222ENST00000584377 K7ELQ4 463 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-222ENST00000584377 GNAI2P04899 355 aa16.31■□□□□ 0.2
CSNK1D-222ENST00000584377 NECTIN2Q92692 538 aa16.31■□□□□ 0.2
CSNK1D-222ENST00000584377 SDSP20132 328 aa16.31■□□□□ 0.2
CSNK1D-222ENST00000584377 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-222ENST00000584377 USHBP1Q8N6Y0 703 aa16.3■□□□□ 0.2
CSNK1D-222ENST00000584377 CIZ1Q9ULV3 898 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms