RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 BRPF1P55201 1214 aaPredicted RBP17.1■□□□□ 0.33
GGA3-214ENST00000582717 ELL2O00472 640 aaPredicted RBP17.09■□□□□ 0.33
GGA3-214ENST00000582717 ABTB2Q8N961 1025 aa17.09■□□□□ 0.33
GGA3-214ENST00000582717 C8orf58Q8NAV2 365 aa17.09■□□□□ 0.33
GGA3-214ENST00000582717 IPO8O15397 1037 aaKnown RBP17.09■□□□□ 0.33
GGA3-214ENST00000582717 MRPL50Q8N5N7 158 aaKnown RBP17.09■□□□□ 0.33
GGA3-214ENST00000582717 DDX19BQ9UMR2 479 aa17.09■□□□□ 0.33
GGA3-214ENST00000582717 KDRP35968 1356 aa17.09■□□□□ 0.33
GGA3-214ENST00000582717 C22orf23Q9BZE7 217 aa17.08■□□□□ 0.33
GGA3-214ENST00000582717 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.33
GGA3-214ENST00000582717 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.32
GGA3-214ENST00000582717 NWD1Q149M9 1564 aa17.08■□□□□ 0.32
GGA3-214ENST00000582717 HDAC1Q13547 482 aaPredicted RBP17.08■□□□□ 0.32
GGA3-214ENST00000582717 TWISTNBQ3B726 338 aaPredicted RBP17.08■□□□□ 0.32
GGA3-214ENST00000582717 MCM10Q7L590 875 aa17.08■□□□□ 0.32
GGA3-214ENST00000582717 EYA1Q99502 592 aa17.08■□□□□ 0.32
GGA3-214ENST00000582717 RRAGDQ9NQL2 400 aaPredicted RBP17.07■□□□□ 0.32
GGA3-214ENST00000582717 HOXC9P31274 260 aa17.07■□□□□ 0.32
GGA3-214ENST00000582717 LTN1O94822 1766 aa17.06■□□□□ 0.32
GGA3-214ENST00000582717 ISY1Q9ULR0 285 aaKnown RBP17.06■□□□□ 0.32
GGA3-214ENST00000582717 KIF24Q5T7B8 1368 aa17.06■□□□□ 0.32
GGA3-214ENST00000582717 FOXO3O43524 673 aa17.05■□□□□ 0.32
GGA3-214ENST00000582717 XRCC6P12956 609 aaKnown RBP eCLIP17.05■□□□□ 0.321e-6■■■■□ 19.8
GGA3-214ENST00000582717 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
GGA3-214ENST00000582717 MTHFSDQ2M296 383 aaKnown RBP17.05■□□□□ 0.32
GGA3-214ENST00000582717 CRB1P82279 1406 aa17.04■□□□□ 0.32
GGA3-214ENST00000582717 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
GGA3-214ENST00000582717 ZBTB40Q9NUA8 1239 aa17.04■□□□□ 0.32
GGA3-214ENST00000582717 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
GGA3-214ENST00000582717 CHL1O00533 1208 aa17.04■□□□□ 0.32
GGA3-214ENST00000582717 NFAT5O94916 1531 aa17.04■□□□□ 0.32
GGA3-214ENST00000582717 MRE11P49959 708 aa17.03■□□□□ 0.32
GGA3-214ENST00000582717 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
GGA3-214ENST00000582717 HSCBQ8IWL3 235 aa17.03■□□□□ 0.32
GGA3-214ENST00000582717 ARHGAP45Q92619 1136 aa17.03■□□□□ 0.32
GGA3-214ENST00000582717 TRAK2O60296 914 aa17.02■□□□□ 0.32
GGA3-214ENST00000582717 NCOA3Q9Y6Q9 1424 aa17.01■□□□□ 0.31
GGA3-214ENST00000582717 CLCN1P35523 988 aa17.01■□□□□ 0.31
GGA3-214ENST00000582717 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
GGA3-214ENST00000582717 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
GGA3-214ENST00000582717 RTL1A6NKG5 1358 aa17.01■□□□□ 0.31
GGA3-214ENST00000582717 ABCC4O15439 1325 aa17■□□□□ 0.31
GGA3-214ENST00000582717 PSME1Q06323 249 aa17■□□□□ 0.31
GGA3-214ENST00000582717 LTV1Q96GA3 475 aaPredicted RBP17■□□□□ 0.31
GGA3-214ENST00000582717 ORAI2Q96SN7 254 aa17■□□□□ 0.31
GGA3-214ENST00000582717 LRRC37A3O60309 1634 aa17■□□□□ 0.31
GGA3-214ENST00000582717 SNX21Q969T3 373 aa16.99■□□□□ 0.31
GGA3-214ENST00000582717 KIAA0232Q92628 1395 aa16.99■□□□□ 0.31
GGA3-214ENST00000582717 GAS2L2Q8NHY3 880 aa16.99■□□□□ 0.31
GGA3-214ENST00000582717 MIS18AQ9NYP9 233 aa16.98■□□□□ 0.31
GGA3-214ENST00000582717 CIZ1Q9ULV3 898 aaPredicted RBP16.98■□□□□ 0.31
GGA3-214ENST00000582717 ZBTB7BO15156 539 aaPredicted RBP16.98■□□□□ 0.31
GGA3-214ENST00000582717 RBM25P49756 843 aaKnown RBP16.98■□□□□ 0.31
GGA3-214ENST00000582717 SPRYD3Q8NCJ5 442 aa16.98■□□□□ 0.31
GGA3-214ENST00000582717 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
GGA3-214ENST00000582717 XPCQ01831 940 aaPredicted RBP16.97■□□□□ 0.31
GGA3-214ENST00000582717 PTMSP20962 102 aa16.96■□□□□ 0.31
GGA3-214ENST00000582717 DDIT3P35638 169 aa16.96■□□□□ 0.31
GGA3-214ENST00000582717 PROSER2Q86WR7 435 aaPredicted RBP16.96■□□□□ 0.31
GGA3-214ENST00000582717 GZF1Q9H116 711 aaPredicted RBP16.96■□□□□ 0.31
GGA3-214ENST00000582717 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.31
GGA3-214ENST00000582717 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.31
GGA3-214ENST00000582717 USHBP1Q8N6Y0 703 aa16.96■□□□□ 0.31
GGA3-214ENST00000582717 IP6K1Q92551 441 aa16.96■□□□□ 0.31
GGA3-214ENST00000582717 API5Q9BZZ5 524 aaKnown RBP16.96■□□□□ 0.31
GGA3-214ENST00000582717 RGS12O14924 1447 aa16.95■□□□□ 0.3
GGA3-214ENST00000582717 RGPD2P0DJD1 1756 aa16.95■□□□□ 0.3
GGA3-214ENST00000582717 PANK2Q9BZ23 570 aa16.95■□□□□ 0.3
GGA3-214ENST00000582717 MSH6P52701 1360 aa16.95■□□□□ 0.3
GGA3-214ENST00000582717 C1orf115Q9H7X2 142 aa16.94■□□□□ 0.3
GGA3-214ENST00000582717 TSPYL4Q9UJ04 414 aa16.94■□□□□ 0.3
GGA3-214ENST00000582717 SLIT3O75094 1523 aa16.94■□□□□ 0.3
GGA3-214ENST00000582717 GRPEL1Q9HAV7 217 aa16.94■□□□□ 0.3
GGA3-214ENST00000582717 C1orf167Q5SNV9 1468 aa16.94■□□□□ 0.3
GGA3-214ENST00000582717 STRCP1A6NGW2 1772 aa16.94■□□□□ 0.3
GGA3-214ENST00000582717 KIF1AQ12756 1690 aa16.93■□□□□ 0.3
GGA3-214ENST00000582717 NUCB1Q02818 461 aa16.93■□□□□ 0.3
GGA3-214ENST00000582717 KCNH5Q8NCM2 988 aa16.93■□□□□ 0.3
GGA3-214ENST00000582717 MAP3K5Q99683 1374 aa16.93■□□□□ 0.3
GGA3-214ENST00000582717 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
GGA3-214ENST00000582717 GNAT3A8MTJ3 354 aa16.93■□□□□ 0.3
GGA3-214ENST00000582717 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
GGA3-214ENST00000582717 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
GGA3-214ENST00000582717 GBP4Q96PP9 640 aa16.93■□□□□ 0.3
GGA3-214ENST00000582717 SKOR2Q2VWA4 1001 aaPredicted RBP16.92■□□□□ 0.3
GGA3-214ENST00000582717 ARXQ96QS3 562 aa16.92■□□□□ 0.3
GGA3-214ENST00000582717 NBPF6Q5VWK0 638 aa16.91■□□□□ 0.3
GGA3-214ENST00000582717 NBPF4Q96M43 638 aa16.91■□□□□ 0.3
GGA3-214ENST00000582717 CHMP4BQ9H444 224 aaKnown RBP16.91■□□□□ 0.3
GGA3-214ENST00000582717 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
GGA3-214ENST00000582717 IL17REQ8NFR9 667 aa16.9■□□□□ 0.3
GGA3-214ENST00000582717 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
GGA3-214ENST00000582717 NAP1L5Q96NT1 182 aaPredicted RBP16.9■□□□□ 0.3
GGA3-214ENST00000582717 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
GGA3-214ENST00000582717 GCP02774 474 aa16.89■□□□□ 0.29
GGA3-214ENST00000582717 INTS3Q68E01 1043 aaKnown RBP16.89■□□□□ 0.29
GGA3-214ENST00000582717 SIRT2Q8IXJ6 389 aa16.89■□□□□ 0.29
GGA3-214ENST00000582717 LMOD2Q6P5Q4 547 aa16.89■□□□□ 0.29
GGA3-214ENST00000582717 KRT28Q7Z3Y7 464 aa16.89■□□□□ 0.29
GGA3-214ENST00000582717 FAM208AQ9UK61 1670 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms