RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 LRRN4Q8WUT4 740 aa9.59□□□□□ -0.87
UBFD1-209ENST00000569919 WBP1LQ9NX94 342 aa9.59□□□□□ -0.87
UBFD1-209ENST00000569919 TBC1D2BQ9UPU7 963 aa9.59□□□□□ -0.87
UBFD1-209ENST00000569919 SYCP2Q9BX26 1530 aa9.59□□□□□ -0.87
UBFD1-209ENST00000569919 DHX29Q7Z478 1369 aaKnown RBP9.59□□□□□ -0.87
UBFD1-209ENST00000569919 MED14O60244 1454 aa9.59□□□□□ -0.87
UBFD1-209ENST00000569919 PLXNC1O60486 1568 aa9.58□□□□□ -0.88
UBFD1-209ENST00000569919 NPHP4O75161 1426 aaPredicted RBP9.58□□□□□ -0.88
UBFD1-209ENST00000569919 MIA2Q96PC5 1412 aa9.58□□□□□ -0.88
UBFD1-209ENST00000569919 BLOC1S3Q6QNY0 202 aa9.58□□□□□ -0.88
UBFD1-209ENST00000569919 HOMEZQ8IX15 550 aa9.58□□□□□ -0.88
UBFD1-209ENST00000569919 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
UBFD1-209ENST00000569919 ZNF330Q9Y3S2 320 aaPredicted RBP9.58□□□□□ -0.88
UBFD1-209ENST00000569919 PCDHB3Q9Y5E6 796 aa9.58□□□□□ -0.88
UBFD1-209ENST00000569919 CCNB3Q8WWL7 1395 aa9.58□□□□□ -0.88
UBFD1-209ENST00000569919 POLR1AO95602 1720 aaPredicted RBP9.57□□□□□ -0.88
UBFD1-209ENST00000569919 LRRIQ1Q96JM4 1722 aa9.57□□□□□ -0.88
UBFD1-209ENST00000569919 RNF19BQ6ZMZ0 732 aa9.57□□□□□ -0.88
UBFD1-209ENST00000569919 VWDEQ8N2E2 1590 aa9.57□□□□□ -0.88
UBFD1-209ENST00000569919 NEURL4Q96JN8 1562 aa9.57□□□□□ -0.88
UBFD1-209ENST00000569919 RTEL1-TNFRSF6BF6WH68 1400 aa9.56□□□□□ -0.88
UBFD1-209ENST00000569919 FAM135AQ9P2D6 1515 aa9.56□□□□□ -0.88
UBFD1-209ENST00000569919 NLRP1Q9C000 1473 aa9.56□□□□□ -0.88
UBFD1-209ENST00000569919 POTEMA6NI47 508 aa9.56□□□□□ -0.88
UBFD1-209ENST00000569919 BRICD5Q6PL45 260 aa9.56□□□□□ -0.88
UBFD1-209ENST00000569919 POTEAQ6S8J7 498 aa9.56□□□□□ -0.88
UBFD1-209ENST00000569919 TRIM34Q9BYJ4 488 aa9.56□□□□□ -0.88
UBFD1-209ENST00000569919 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
UBFD1-209ENST00000569919 NDUFB9Q9Y6M9 179 aa9.56□□□□□ -0.88
UBFD1-209ENST00000569919 ALKQ9UM73 1620 aa9.56□□□□□ -0.88
UBFD1-209ENST00000569919 INO80Q9ULG1 1556 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-209ENST00000569919 PZPP20742 1482 aa9.55□□□□□ -0.88
UBFD1-209ENST00000569919 PER1O15534 1290 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-209ENST00000569919 NR1I2O75469 434 aa9.55□□□□□ -0.88
UBFD1-209ENST00000569919 POTEGQ6S5H5 508 aa9.55□□□□□ -0.88
UBFD1-209ENST00000569919 THSD4Q6ZMP0 1018 aa9.55□□□□□ -0.88
UBFD1-209ENST00000569919 WWC1Q8IX03 1113 aa9.55□□□□□ -0.88
UBFD1-209ENST00000569919 KCTD12Q96CX2 325 aaKnown RBP9.55□□□□□ -0.88
UBFD1-209ENST00000569919 LRRC7Q96NW7 1537 aa9.55□□□□□ -0.88
UBFD1-209ENST00000569919 ADGBQ8N7X0 1667 aa9.55□□□□□ -0.88
UBFD1-209ENST00000569919 UGGT1Q9NYU2 1555 aa9.54□□□□□ -0.88
UBFD1-209ENST00000569919 DEPDC5O75140 1603 aa9.54□□□□□ -0.88
UBFD1-209ENST00000569919 DESI1Q6ICB0 168 aa9.54□□□□□ -0.88
UBFD1-209ENST00000569919 CCDC82Q8N4S0 544 aa9.54□□□□□ -0.88
UBFD1-209ENST00000569919 EPS8L1Q8TE68 723 aa9.54□□□□□ -0.88
UBFD1-209ENST00000569919 USB1Q9BQ65 265 aaKnown RBP9.54□□□□□ -0.88
UBFD1-209ENST00000569919 ZNF644Q9H582 1327 aaPredicted RBP9.54□□□□□ -0.88
UBFD1-209ENST00000569919 FMNL1O95466 1100 aaPredicted RBP9.53□□□□□ -0.88
UBFD1-209ENST00000569919 THAP11Q96EK4 314 aa9.53□□□□□ -0.88
UBFD1-209ENST00000569919 FAM135BQ49AJ0 1406 aa9.52□□□□□ -0.89
UBFD1-209ENST00000569919 IRF5Q13568 498 aa9.51□□□□□ -0.89
UBFD1-209ENST00000569919 NR6A1Q15406 480 aa9.51□□□□□ -0.89
UBFD1-209ENST00000569919 LYPD8Q6UX82 237 aa9.51□□□□□ -0.89
UBFD1-209ENST00000569919 PLSCR2Q9NRY7 297 aa9.51□□□□□ -0.89
UBFD1-209ENST00000569919 FYCO1Q9BQS8 1478 aa9.51□□□□□ -0.89
UBFD1-209ENST00000569919 MBD5Q9P267 1494 aa9.51□□□□□ -0.89
UBFD1-209ENST00000569919 KDM5DQ9BY66 1539 aa9.51□□□□□ -0.89
UBFD1-209ENST00000569919 MTUS2Q5JR59 1369 aa9.5□□□□□ -0.89
UBFD1-209ENST00000569919 GPR37L1O60883 481 aa9.5□□□□□ -0.89
UBFD1-209ENST00000569919 TSPY4P0CV99 314 aa9.5□□□□□ -0.89
UBFD1-209ENST00000569919 TSPY10P0CW01 314 aa9.5□□□□□ -0.89
UBFD1-209ENST00000569919 TXNDC2Q86VQ3 553 aa9.5□□□□□ -0.89
UBFD1-209ENST00000569919 CDAN1Q8IWY9 1227 aa9.5□□□□□ -0.89
UBFD1-209ENST00000569919 EID1Q9Y6B2 187 aa9.5□□□□□ -0.89
UBFD1-209ENST00000569919 IQGAP1P46940 1657 aa9.5□□□□□ -0.89
UBFD1-209ENST00000569919 RNF17Q9BXT8 1623 aaKnown RBP9.49□□□□□ -0.89
UBFD1-209ENST00000569919 POM121CA8CG34 1229 aa9.49□□□□□ -0.89
UBFD1-209ENST00000569919 COPS2P61201 443 aa9.49□□□□□ -0.89
UBFD1-209ENST00000569919 NYAP1Q6ZVC0 841 aa9.48□□□□□ -0.89
UBFD1-209ENST00000569919 SYNMO15061 1565 aa9.48□□□□□ -0.89
UBFD1-209ENST00000569919 STRCP1A6NGW2 1772 aa9.47□□□□□ -0.89
UBFD1-209ENST00000569919 LTKP29376 864 aa9.47□□□□□ -0.89
UBFD1-209ENST00000569919 CCDC97Q96F63 343 aaPredicted RBP9.47□□□□□ -0.89
UBFD1-209ENST00000569919 SPSB2Q99619 263 aa9.47□□□□□ -0.89
UBFD1-209ENST00000569919 SERPINA10Q9UK55 444 aa9.47□□□□□ -0.89
UBFD1-209ENST00000569919 JUNDP17535 347 aa9.46□□□□□ -0.9
UBFD1-209ENST00000569919 KCNA6P17658 529 aa9.46□□□□□ -0.9
UBFD1-209ENST00000569919 PTPN5P54829 565 aa9.46□□□□□ -0.9
UBFD1-209ENST00000569919 WASHC4Q2M389 1173 aa9.46□□□□□ -0.9
UBFD1-209ENST00000569919 FAM160A2Q8N612 972 aaPredicted RBP9.46□□□□□ -0.9
UBFD1-209ENST00000569919 MSS51Q4VC12 460 aa9.45□□□□□ -0.9
UBFD1-209ENST00000569919 CALR3Q96L12 384 aaKnown RBP9.45□□□□□ -0.9
UBFD1-209ENST00000569919 SCAF11Q99590 1463 aaKnown RBP9.45□□□□□ -0.9
UBFD1-209ENST00000569919 VAC14Q08AM6 782 aa9.44□□□□□ -0.9
UBFD1-209ENST00000569919 PTPRNQ16849 979 aa9.44□□□□□ -0.9
UBFD1-209ENST00000569919 GLMNQ92990 594 aa9.44□□□□□ -0.9
UBFD1-209ENST00000569919 CCDC141Q6ZP82 1450 aa9.43□□□□□ -0.9
UBFD1-209ENST00000569919 ZPR1O75312 459 aa9.43□□□□□ -0.9
UBFD1-209ENST00000569919 ZNF772Q68DY9 489 aaPredicted RBP9.43□□□□□ -0.9
UBFD1-209ENST00000569919 MTRQ99707 1265 aa9.43□□□□□ -0.9
UBFD1-209ENST00000569919 SLAIN2Q9P270 581 aa9.43□□□□□ -0.9
UBFD1-209ENST00000569919 CEP162Q5TB80 1403 aa9.42□□□□□ -0.9
UBFD1-209ENST00000569919 TMEM94Q12767 1356 aa9.42□□□□□ -0.9
UBFD1-209ENST00000569919 JCADQ9P266 1359 aa9.42□□□□□ -0.9
UBFD1-209ENST00000569919 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
UBFD1-209ENST00000569919 F12P00748 615 aaPredicted RBP9.42□□□□□ -0.9
UBFD1-209ENST00000569919 HDGFL1Q5TGJ6 251 aa9.42□□□□□ -0.9
UBFD1-209ENST00000569919 PNMA1Q8ND90 353 aa9.42□□□□□ -0.9
UBFD1-209ENST00000569919 MAP10Q9P2G4 905 aa9.42□□□□□ -0.9
UBFD1-209ENST00000569919 ZC3H13Q5T200 1668 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms