RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 SNX21Q969T3 373 aa21.22■□□□□ 0.99
VAC14-210ENST00000568548 ZGPATQ8N5A5 531 aaKnown RBP21.22■□□□□ 0.99
VAC14-210ENST00000568548 UBE2Q2Q8WVN8 375 aa21.22■□□□□ 0.99
VAC14-210ENST00000568548 LRRC7Q96NW7 1537 aa21.21■□□□□ 0.99
VAC14-210ENST00000568548 ESPNB1AK53 854 aa21.21■□□□□ 0.99
VAC14-210ENST00000568548 MEIS3Q99687 375 aa21.21■□□□□ 0.99
VAC14-210ENST00000568548 CPSF1Q10570 1443 aaKnown RBP21.21■□□□□ 0.99
VAC14-210ENST00000568548 CDC45O75419 566 aa21.2■□□□□ 0.98
VAC14-210ENST00000568548 FOXO3O43524 673 aa21.2■□□□□ 0.98
VAC14-210ENST00000568548 AK9Q5TCS8 1911 aa21.19■□□□□ 0.98
VAC14-210ENST00000568548 COG3Q96JB2 828 aa21.19■□□□□ 0.98
VAC14-210ENST00000568548 PNPLA6Q8IY17 1366 aa21.19■□□□□ 0.98
VAC14-210ENST00000568548 PRR36Q9H6K5 1346 aa21.19■□□□□ 0.98
VAC14-210ENST00000568548 DTNBO60941 627 aa21.18■□□□□ 0.98
VAC14-210ENST00000568548 THEMISQ8N1K5 641 aaPredicted RBP21.18■□□□□ 0.98
VAC14-210ENST00000568548 IFT57Q9NWB7 429 aa21.18■□□□□ 0.98
VAC14-210ENST00000568548 EDC4Q6P2E9 1401 aaKnown RBP21.18■□□□□ 0.98
VAC14-210ENST00000568548 CAVIN1Q6NZI2 390 aaKnown RBP21.18■□□□□ 0.98
VAC14-210ENST00000568548 CFAP44Q96MT7 982 aa21.18■□□□□ 0.98
VAC14-210ENST00000568548 CLCN1P35523 988 aa21.17■□□□□ 0.98
VAC14-210ENST00000568548 RBM27Q9P2N5 1060 aaKnown RBP21.17■□□□□ 0.98
VAC14-210ENST00000568548 BAG4O95429 457 aaKnown RBP21.17■□□□□ 0.98
VAC14-210ENST00000568548 PTPRUQ92729 1446 aa21.17■□□□□ 0.98
VAC14-210ENST00000568548 SLIT1O75093 1534 aa21.16■□□□□ 0.98
VAC14-210ENST00000568548 SDSP20132 328 aa21.16■□□□□ 0.98
VAC14-210ENST00000568548 HSP90AB2PQ58FF8 381 aa21.16■□□□□ 0.98
VAC14-210ENST00000568548 NCBP3Q53F19 620 aaKnown RBP21.15■□□□□ 0.98
VAC14-210ENST00000568548 AMOTL2Q9Y2J4 779 aa21.15■□□□□ 0.98
VAC14-210ENST00000568548 ARHGAP23Q9P227 1491 aa21.15■□□□□ 0.98
VAC14-210ENST00000568548 ABCC4O15439 1325 aa21.15■□□□□ 0.98
VAC14-210ENST00000568548 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.15■□□□□ 0.98
VAC14-210ENST00000568548 PLEKHG5O94827 1062 aa21.15■□□□□ 0.98
VAC14-210ENST00000568548 SLC4A2P04920 1241 aa21.15■□□□□ 0.98
VAC14-210ENST00000568548 ZNF853P0CG23 659 aa21.15■□□□□ 0.98
VAC14-210ENST00000568548 G2E3Q7L622 706 aa21.15■□□□□ 0.98
VAC14-210ENST00000568548 CDC42BPGQ6DT37 1551 aa21.14■□□□□ 0.98
VAC14-210ENST00000568548 API5Q9BZZ5 524 aaKnown RBP21.14■□□□□ 0.97
VAC14-210ENST00000568548 PRPF40AO75400 957 aaKnown RBP21.13■□□□□ 0.97
VAC14-210ENST00000568548 EXOC6BQ9Y2D4 811 aa21.13■□□□□ 0.97
VAC14-210ENST00000568548 TBX22Q9Y458 520 aa21.13■□□□□ 0.97
VAC14-210ENST00000568548 TTC22Q5TAA0 569 aa21.13■□□□□ 0.97
VAC14-210ENST00000568548 ARID3AQ99856 593 aa21.13■□□□□ 0.97
VAC14-210ENST00000568548 GOLGA6L22H0YM25 854 aa21.12■□□□□ 0.97
VAC14-210ENST00000568548 MAP2P11137 1827 aaKnown RBP21.12■□□□□ 0.97
VAC14-210ENST00000568548 MPNDQ8N594 471 aa21.12■□□□□ 0.97
VAC14-210ENST00000568548 USP26Q9BXU7 913 aa21.12■□□□□ 0.97
VAC14-210ENST00000568548 DCTPP1Q9H773 170 aa21.12■□□□□ 0.97
VAC14-210ENST00000568548 NCOA3Q9Y6Q9 1424 aa21.12■□□□□ 0.97
VAC14-210ENST00000568548 NASPP49321 788 aaPredicted RBP21.11■□□□□ 0.97
VAC14-210ENST00000568548 HSP90AA2PQ14568 343 aaPredicted RBP21.11■□□□□ 0.97
VAC14-210ENST00000568548 ARHGAP45Q92619 1136 aa21.11■□□□□ 0.97
VAC14-210ENST00000568548 CALD1Q05682 793 aaKnown RBP21.11■□□□□ 0.97
VAC14-210ENST00000568548 EIF4A2Q14240 407 aaKnown RBP21.11■□□□□ 0.97
VAC14-210ENST00000568548 VSIG10Q8N0Z9 540 aa21.11■□□□□ 0.97
VAC14-210ENST00000568548 CEP85Q6P2H3 762 aa21.1■□□□□ 0.97
VAC14-210ENST00000568548 MON2Q7Z3U7 1717 aa21.09■□□□□ 0.97
VAC14-210ENST00000568548 CIZ1Q9ULV3 898 aaPredicted RBP21.09■□□□□ 0.97
VAC14-210ENST00000568548 ZNF428Q96B54 188 aa21.09■□□□□ 0.97
VAC14-210ENST00000568548 ITSN1Q15811 1721 aa21.09■□□□□ 0.97
VAC14-210ENST00000568548 ACEP12821 1306 aa21.08■□□□□ 0.97
VAC14-210ENST00000568548 NUTM2GQ5VZR2 741 aa21.08■□□□□ 0.97
VAC14-210ENST00000568548 NSFL1CQ9UNZ2 370 aaKnown RBP21.08■□□□□ 0.97
VAC14-210ENST00000568548 MSH6P52701 1360 aa21.08■□□□□ 0.96
VAC14-210ENST00000568548 AKAP12Q02952 1782 aa21.08■□□□□ 0.96
VAC14-210ENST00000568548 RNF214Q8ND24 703 aa21.07■□□□□ 0.96
VAC14-210ENST00000568548 ANP32BQ92688 251 aaKnown RBP21.07■□□□□ 0.96
VAC14-210ENST00000568548 LARP6Q9BRS8 491 aaKnown RBP21.07■□□□□ 0.96
VAC14-210ENST00000568548 BRPF1P55201 1214 aaPredicted RBP21.06■□□□□ 0.96
VAC14-210ENST00000568548 ANKRD44Q8N8A2 993 aa21.06■□□□□ 0.96
VAC14-210ENST00000568548 RILPL2Q969X0 211 aa21.06■□□□□ 0.96
VAC14-210ENST00000568548 MAP4K4O95819 1239 aaPredicted RBP21.05■□□□□ 0.96
VAC14-210ENST00000568548 NEK4P51957 841 aa21.05■□□□□ 0.96
VAC14-210ENST00000568548 CHMP4BQ9H444 224 aaKnown RBP21.05■□□□□ 0.96
VAC14-210ENST00000568548 INTS3Q68E01 1043 aaKnown RBP21.05■□□□□ 0.96
VAC14-210ENST00000568548 RIMS1Q86UR5 1692 aaKnown RBP21.05■□□□□ 0.96
VAC14-210ENST00000568548 PLEKHG3A1L390 1219 aa21.05■□□□□ 0.96
VAC14-210ENST00000568548 PTCH1Q13635 1447 aa21.05■□□□□ 0.96
VAC14-210ENST00000568548 PRIM1P49642 420 aaKnown RBP21.04■□□□□ 0.96
VAC14-210ENST00000568548 RABEP1Q15276 862 aa21.04■□□□□ 0.96
VAC14-210ENST00000568548 SKOR2Q2VWA4 1001 aaPredicted RBP21.04■□□□□ 0.96
VAC14-210ENST00000568548 GDPD2Q9HCC8 539 aa21.04■□□□□ 0.96
VAC14-210ENST00000568548 TTC21BQ7Z4L5 1316 aa21.04■□□□□ 0.96
VAC14-210ENST00000568548 AATKQ6ZMQ8 1374 aa21.03■□□□□ 0.96
VAC14-210ENST00000568548 TRIM6-TRIM34B2RNG4 842 aa21.03■□□□□ 0.96
VAC14-210ENST00000568548 UPF3BQ9BZI7 483 aaKnown RBP21.03■□□□□ 0.96
VAC14-210ENST00000568548 CEP170BQ9Y4F5 1589 aaPredicted RBP21.03■□□□□ 0.96
VAC14-210ENST00000568548 RBM10P98175 930 aaKnown RBP21.03■□□□□ 0.96
VAC14-210ENST00000568548 LMOD3Q0VAK6 560 aa21.03■□□□□ 0.96
VAC14-210ENST00000568548 ZSCAN23Q3MJ62 389 aa21.03■□□□□ 0.96
VAC14-210ENST00000568548 LTV1Q96GA3 475 aaPredicted RBP21.03■□□□□ 0.96
VAC14-210ENST00000568548 RBSNQ9H1K0 784 aa21.03■□□□□ 0.96
VAC14-210ENST00000568548 ZDHHC9Q9Y397 364 aa21.02■□□□□ 0.96
VAC14-210ENST00000568548 LMBRD1Q9NUN5 540 aa21.02■□□□□ 0.96
VAC14-210ENST00000568548 TSPYL4Q9UJ04 414 aa21.02■□□□□ 0.96
VAC14-210ENST00000568548 TOPAZ1Q8N9V7 1692 aa21.01■□□□□ 0.95
VAC14-210ENST00000568548 KCNA6P17658 529 aa21.01■□□□□ 0.95
VAC14-210ENST00000568548 GPT2Q8TD30 523 aa21.01■□□□□ 0.95
VAC14-210ENST00000568548 PALD1Q9ULE6 856 aa21.01■□□□□ 0.95
VAC14-210ENST00000568548 DIP2AQ14689 1571 aa21.01■□□□□ 0.95
VAC14-210ENST00000568548 KLHL40Q2TBA0 621 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms