RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 DEPDC4Q8N2C3 294 aa10.06□□□□□ -0.8
HERPUD1-208ENST00000563911 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
HERPUD1-208ENST00000563911 GIGYF1O75420 1035 aaPredicted RBP10.05□□□□□ -0.8
HERPUD1-208ENST00000563911 CD2BP2O95400 341 aaKnown RBP10.05□□□□□ -0.8
HERPUD1-208ENST00000563911 RPIAP49247 311 aa10.05□□□□□ -0.8
HERPUD1-208ENST00000563911 PLPP7Q8NBV4 271 aa10.05□□□□□ -0.8
HERPUD1-208ENST00000563911 ABCC2Q92887 1545 aa10.05□□□□□ -0.8
HERPUD1-208ENST00000563911 GLI2P10070 1586 aa10.05□□□□□ -0.8
HERPUD1-208ENST00000563911 CSB-PGBD3P0DP91 1061 aa10.04□□□□□ -0.8
HERPUD1-208ENST00000563911 WNT7BP56706 349 aa10.04□□□□□ -0.8
HERPUD1-208ENST00000563911 SKOR1P84550 965 aa10.04□□□□□ -0.8
HERPUD1-208ENST00000563911 PLEKHM2Q8IWE5 1019 aa10.04□□□□□ -0.8
HERPUD1-208ENST00000563911 C1QTNF2Q9BXJ5 285 aa10.04□□□□□ -0.8
HERPUD1-208ENST00000563911 VARSP26640 1264 aaKnown RBP10.03□□□□□ -0.8
HERPUD1-208ENST00000563911 PDE4CQ08493 712 aa10.03□□□□□ -0.8
HERPUD1-208ENST00000563911 NBPF20Q3BBV1 942 aa10.03□□□□□ -0.8
HERPUD1-208ENST00000563911 MAP7D1Q3KQU3 841 aa10.03□□□□□ -0.8
HERPUD1-208ENST00000563911 KANK4Q5T7N3 995 aaPredicted RBP10.03□□□□□ -0.8
HERPUD1-208ENST00000563911 NCOA4Q13772 614 aa10.02□□□□□ -0.81
HERPUD1-208ENST00000563911 TSGA10IPQ3SY00 556 aa10.02□□□□□ -0.81
HERPUD1-208ENST00000563911 RNF20Q5VTR2 975 aa10.02□□□□□ -0.81
HERPUD1-208ENST00000563911 TRMT44Q8IYL2 757 aaKnown RBP10.02□□□□□ -0.81
HERPUD1-208ENST00000563911 TRAIPQ9BWF2 469 aa10.02□□□□□ -0.81
HERPUD1-208ENST00000563911 MKRN1Q9UHC7 482 aaKnown RBP10.02□□□□□ -0.81
HERPUD1-208ENST00000563911 CDV3Q9UKY7 258 aaKnown RBP10.02□□□□□ -0.81
HERPUD1-208ENST00000563911 EPRSP07814 1512 aaKnown RBP10.02□□□□□ -0.81
HERPUD1-208ENST00000563911 LZTS3O60299 673 aaPredicted RBP10.01□□□□□ -0.81
HERPUD1-208ENST00000563911 ATG7O95352 703 aa10.01□□□□□ -0.81
HERPUD1-208ENST00000563911 EHBP1Q8NDI1 1231 aa10.01□□□□□ -0.81
HERPUD1-208ENST00000563911 DOLKQ9UPQ8 538 aa10.01□□□□□ -0.81
HERPUD1-208ENST00000563911 TNIKQ9UKE5 1360 aa10.01□□□□□ -0.81
HERPUD1-208ENST00000563911 PLB1Q6P1J6 1458 aa10□□□□□ -0.81
HERPUD1-208ENST00000563911 EML3Q32P44 896 aa10□□□□□ -0.81
HERPUD1-208ENST00000563911 RC3H1Q5TC82 1133 aaKnown RBP10□□□□□ -0.81
HERPUD1-208ENST00000563911 LIAT1Q6ZQX7 453 aa10□□□□□ -0.81
HERPUD1-208ENST00000563911 CCDC85AQ96PX6 553 aaPredicted RBP10□□□□□ -0.81
HERPUD1-208ENST00000563911 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
HERPUD1-208ENST00000563911 CUL7Q14999 1698 aa9.99□□□□□ -0.81
HERPUD1-208ENST00000563911 UHRF1BP1LA0JNW5 1464 aa9.99□□□□□ -0.81
HERPUD1-208ENST00000563911 DISP1Q96F81 1524 aa9.99□□□□□ -0.81
HERPUD1-208ENST00000563911 RAB15P59190 212 aa9.99□□□□□ -0.81
HERPUD1-208ENST00000563911 ARID5BQ14865 1188 aa9.99□□□□□ -0.81
HERPUD1-208ENST00000563911 TRAF7Q6Q0C0 670 aa9.99□□□□□ -0.81
HERPUD1-208ENST00000563911 VASH1Q7L8A9 365 aaPredicted RBP9.99□□□□□ -0.81
HERPUD1-208ENST00000563911 KCTD15Q96SI1 283 aaPredicted RBP9.99□□□□□ -0.81
HERPUD1-208ENST00000563911 MAP3K4Q9Y6R4 1608 aa9.98□□□□□ -0.81
HERPUD1-208ENST00000563911 SLC19A1P41440 591 aa9.98□□□□□ -0.81
HERPUD1-208ENST00000563911 OXLD1Q5BKU9 147 aa9.98□□□□□ -0.81
HERPUD1-208ENST00000563911 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
HERPUD1-208ENST00000563911 CARMIL1Q5VZK9 1371 aa9.98□□□□□ -0.81
HERPUD1-208ENST00000563911 UACAQ9BZF9 1416 aa9.98□□□□□ -0.81
HERPUD1-208ENST00000563911 KDM5BQ9UGL1 1544 aa9.97□□□□□ -0.81
HERPUD1-208ENST00000563911 ESPNB1AK53 854 aa9.97□□□□□ -0.81
HERPUD1-208ENST00000563911 ATP5J2-PTCD1G3V325 749 aa9.97□□□□□ -0.81
HERPUD1-208ENST00000563911 RASA1P20936 1047 aa9.97□□□□□ -0.81
HERPUD1-208ENST00000563911 TRIM26Q12899 539 aaPredicted RBP9.97□□□□□ -0.81
HERPUD1-208ENST00000563911 LARP1Q6PKG0 1096 aaKnown RBP9.97□□□□□ -0.81
HERPUD1-208ENST00000563911 SEPT12Q8IYM1 358 aa9.97□□□□□ -0.81
HERPUD1-208ENST00000563911 NOD1Q9Y239 953 aa9.97□□□□□ -0.81
HERPUD1-208ENST00000563911 USTQ9Y2C2 406 aa9.97□□□□□ -0.81
HERPUD1-208ENST00000563911 PCDHB11Q9Y5F2 797 aa9.97□□□□□ -0.81
HERPUD1-208ENST00000563911 EMID1Q96A84 441 aaPredicted RBP9.96□□□□□ -0.82
HERPUD1-208ENST00000563911 CCDC125Q86Z20 511 aa9.95□□□□□ -0.82
HERPUD1-208ENST00000563911 FBXO41Q8TF61 875 aa9.95□□□□□ -0.82
HERPUD1-208ENST00000563911 CDCA7Q9BWT1 371 aaPredicted RBP9.95□□□□□ -0.82
HERPUD1-208ENST00000563911 PLA2G2EQ9NZK7 142 aa9.95□□□□□ -0.82
HERPUD1-208ENST00000563911 NOVA2Q9UNW9 492 aaKnown RBP9.95□□□□□ -0.82
HERPUD1-208ENST00000563911 MAP4K5Q9Y4K4 846 aa9.95□□□□□ -0.82
HERPUD1-208ENST00000563911 KIF27Q86VH2 1401 aa9.95□□□□□ -0.82
HERPUD1-208ENST00000563911 ZBTB7CA1YPR0 619 aa9.94□□□□□ -0.82
HERPUD1-208ENST00000563911 CARNS1A5YM72 827 aa9.94□□□□□ -0.82
HERPUD1-208ENST00000563911 FAM196BA6NMK8 535 aa9.94□□□□□ -0.82
HERPUD1-208ENST00000563911 ELOAQ14241 798 aaKnown RBP9.94□□□□□ -0.82
HERPUD1-208ENST00000563911 CRTC2Q53ET0 693 aaPredicted RBP9.94□□□□□ -0.82
HERPUD1-208ENST00000563911 TRIM50Q86XT4 487 aa9.94□□□□□ -0.82
HERPUD1-208ENST00000563911 AEBP1Q8IUX7 1158 aa9.94□□□□□ -0.82
HERPUD1-208ENST00000563911 CARMIL2Q6F5E8 1435 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L15C9J2P7 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L10C9JJH3 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L13C9JLJ4 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L12C9JPN9 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L11C9JVI0 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L21D6R901 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L18D6R9N7 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L22D6RA61 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L17D6RBQ6 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L19D6RCP7 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L20D6RJB6 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP17L24Q0WX57 530 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 USP4Q13107 963 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 OGFOD1Q8N543 542 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 KCTD17Q8N5Z5 321 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 SIRT1Q96EB6 747 aa9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 ZCCHC11Q5TAX3 1644 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-208ENST00000563911 ATP1A2P50993 1020 aa9.92□□□□□ -0.82
HERPUD1-208ENST00000563911 PTK7Q13308 1070 aa9.92□□□□□ -0.82
HERPUD1-208ENST00000563911 INTS6LQ5JSJ4 861 aaKnown RBP9.92□□□□□ -0.82
HERPUD1-208ENST00000563911 CDK15Q96Q40 435 aa9.92□□□□□ -0.82
HERPUD1-208ENST00000563911 TLL2Q9Y6L7 1015 aa9.92□□□□□ -0.82
HERPUD1-208ENST00000563911 IQGAP2Q13576 1575 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms