RNA–Protein interactions for RNA: ENST00000561334.1

SNX22-207, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 2,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-207ENST00000561334 LMOD3Q0VAK6 560 aa20.45■□□□□ 0.86
SNX22-207ENST00000561334 SSH1Q8WYL5 1049 aa20.45■□□□□ 0.86
SNX22-207ENST00000561334 C1orf167Q5SNV9 1468 aa20.45■□□□□ 0.86
SNX22-207ENST00000561334 CALD1Q05682 793 aaKnown RBP20.45■□□□□ 0.86
SNX22-207ENST00000561334 IFT57Q9NWB7 429 aa20.45■□□□□ 0.86
SNX22-207ENST00000561334 KDRP35968 1356 aa20.45■□□□□ 0.86
SNX22-207ENST00000561334 IGSF1Q8N6C5 1336 aa20.44■□□□□ 0.86
SNX22-207ENST00000561334 TMEM94Q12767 1356 aa20.44■□□□□ 0.86
SNX22-207ENST00000561334 TRPM3Q9HCF6 1732 aaPredicted RBP20.44■□□□□ 0.86
SNX22-207ENST00000561334 FSD2A1L4K1 749 aa20.44■□□□□ 0.86
SNX22-207ENST00000561334 MCM4P33991 863 aa20.44■□□□□ 0.86
SNX22-207ENST00000561334 GOLGA6L3A6NEY3 463 aa20.43■□□□□ 0.86
SNX22-207ENST00000561334 XRCC6P12956 609 aaKnown RBP eCLIP20.43■□□□□ 0.86
SNX22-207ENST00000561334 SMC4Q9NTJ3 1288 aa20.43■□□□□ 0.86
SNX22-207ENST00000561334 GNAI1P63096 354 aa20.43■□□□□ 0.86
SNX22-207ENST00000561334 MBIPQ9NS73 344 aa20.43■□□□□ 0.86
SNX22-207ENST00000561334 KIF1AQ12756 1690 aa20.42■□□□□ 0.86
SNX22-207ENST00000561334 CFAP44Q96MT7 982 aa20.41■□□□□ 0.86
SNX22-207ENST00000561334 LMTK3Q96Q04 1460 aa20.41■□□□□ 0.86
SNX22-207ENST00000561334 STRCQ7RTU9 1775 aa20.41■□□□□ 0.86
SNX22-207ENST00000561334 RTL1A6NKG5 1358 aa20.4■□□□□ 0.86
SNX22-207ENST00000561334 ZKSCAN2Q63HK3 967 aa20.4■□□□□ 0.86
SNX22-207ENST00000561334 TSPYL6Q8N831 410 aa20.39■□□□□ 0.85
SNX22-207ENST00000561334 MST1RQ04912 1400 aa20.39■□□□□ 0.85
SNX22-207ENST00000561334 MTHFSDQ2M296 383 aaKnown RBP20.39■□□□□ 0.85
SNX22-207ENST00000561334 MCM10Q7L590 875 aa20.39■□□□□ 0.85
SNX22-207ENST00000561334 CHMP5Q9NZZ3 219 aa20.39■□□□□ 0.85
SNX22-207ENST00000561334 PHRF1Q9P1Y6 1649 aaKnown RBP20.38■□□□□ 0.85
SNX22-207ENST00000561334 MVPQ14764 893 aaKnown RBP20.38■□□□□ 0.85
SNX22-207ENST00000561334 SPRYD3Q8NCJ5 442 aa20.38■□□□□ 0.85
SNX22-207ENST00000561334 XIRP1Q702N8 1843 aaKnown RBP20.38■□□□□ 0.85
SNX22-207ENST00000561334 LTV1Q96GA3 475 aaPredicted RBP20.38■□□□□ 0.85
SNX22-207ENST00000561334 VAMP4O75379 141 aa20.37■□□□□ 0.85
SNX22-207ENST00000561334 C22orf23Q9BZE7 217 aa20.37■□□□□ 0.85
SNX22-207ENST00000561334 NOB1Q9ULX3 412 aaKnown RBP20.37■□□□□ 0.85
SNX22-207ENST00000561334 TRIM27P14373 513 aa20.37■□□□□ 0.85
SNX22-207ENST00000561334 ALDH1L2Q3SY69 923 aa20.37■□□□□ 0.85
SNX22-207ENST00000561334 KRT28Q7Z3Y7 464 aa20.37■□□□□ 0.85
SNX22-207ENST00000561334 KCNH5Q8NCM2 988 aa20.37■□□□□ 0.85
SNX22-207ENST00000561334 IP6K1Q92551 441 aa20.37■□□□□ 0.85
SNX22-207ENST00000561334 DCCP43146 1447 aa20.37■□□□□ 0.85
SNX22-207ENST00000561334 NCOA3Q9Y6Q9 1424 aa20.37■□□□□ 0.85
SNX22-207ENST00000561334 ATF3P18847 181 aa20.36■□□□□ 0.85
SNX22-207ENST00000561334 NAP1L5Q96NT1 182 aaPredicted RBP20.36■□□□□ 0.85
SNX22-207ENST00000561334 SLIT3O75094 1523 aa20.36■□□□□ 0.85
SNX22-207ENST00000561334 DZIP1LQ8IYY4 767 aaKnown RBP20.36■□□□□ 0.85
SNX22-207ENST00000561334 ARXQ96QS3 562 aa20.36■□□□□ 0.85
SNX22-207ENST00000561334 RGPD2P0DJD1 1756 aa20.36■□□□□ 0.85
SNX22-207ENST00000561334 ATF7IPQ6VMQ6 1270 aa20.35■□□□□ 0.85
SNX22-207ENST00000561334 C8orf58Q8NAV2 365 aa20.35■□□□□ 0.85
SNX22-207ENST00000561334 GZF1Q9H116 711 aaPredicted RBP20.35■□□□□ 0.85
SNX22-207ENST00000561334 ELL2O00472 640 aaPredicted RBP20.34■□□□□ 0.85
SNX22-207ENST00000561334 TRAK2O60296 914 aa20.34■□□□□ 0.85
SNX22-207ENST00000561334 HSP90AA2PQ14568 343 aaPredicted RBP20.34■□□□□ 0.85
SNX22-207ENST00000561334 ZNF428Q96B54 188 aa20.34■□□□□ 0.85
SNX22-207ENST00000561334 ALS2Q96Q42 1657 aa20.34■□□□□ 0.85
SNX22-207ENST00000561334 GCP02774 474 aa20.34■□□□□ 0.85
SNX22-207ENST00000561334 LMOD2Q6P5Q4 547 aa20.34■□□□□ 0.85
SNX22-207ENST00000561334 FTSJ3Q8IY81 847 aaKnown RBP20.34■□□□□ 0.85
SNX22-207ENST00000561334 PANK2Q9BZ23 570 aa20.34■□□□□ 0.85
SNX22-207ENST00000561334 CRB1P82279 1406 aa20.33■□□□□ 0.85
SNX22-207ENST00000561334 CLCN1P35523 988 aa20.33■□□□□ 0.85
SNX22-207ENST00000561334 MFAP1P55081 439 aaKnown RBP20.33■□□□□ 0.84
SNX22-207ENST00000561334 KIF16BQ96L93 1317 aa20.32■□□□□ 0.84
SNX22-207ENST00000561334 ZBTB7CA1YPR0 619 aa20.32■□□□□ 0.84
SNX22-207ENST00000561334 CHL1O00533 1208 aa20.32■□□□□ 0.84
SNX22-207ENST00000561334 BRPF1P55201 1214 aaPredicted RBP20.32■□□□□ 0.84
SNX22-207ENST00000561334 TWISTNBQ3B726 338 aaPredicted RBP20.32■□□□□ 0.84
SNX22-207ENST00000561334 USHBP1Q8N6Y0 703 aa20.32■□□□□ 0.84
SNX22-207ENST00000561334 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
SNX22-207ENST00000561334 MRE11P49959 708 aa20.31■□□□□ 0.84
SNX22-207ENST00000561334 ARHGEF25Q86VW2 580 aa20.3■□□□□ 0.84
SNX22-207ENST00000561334 GAS2L2Q8NHY3 880 aa20.3■□□□□ 0.84
SNX22-207ENST00000561334 HDAC1Q13547 482 aaPredicted RBP20.3■□□□□ 0.84
SNX22-207ENST00000561334 NBPF6Q5VWK0 638 aa20.3■□□□□ 0.84
SNX22-207ENST00000561334 MRPL50Q8N5N7 158 aaKnown RBP20.3■□□□□ 0.84
SNX22-207ENST00000561334 NBPF4Q96M43 638 aa20.3■□□□□ 0.84
SNX22-207ENST00000561334 CADPS2Q86UW7 1296 aa20.29■□□□□ 0.84
SNX22-207ENST00000561334 HSP90AA1P07900 732 aaKnown RBP20.29■□□□□ 0.84
SNX22-207ENST00000561334 MED1Q15648 1581 aaPredicted RBP20.28■□□□□ 0.84
SNX22-207ENST00000561334 LRRC37A3O60309 1634 aa20.28■□□□□ 0.84
SNX22-207ENST00000561334 RGPD5Q99666 1765 aa20.28■□□□□ 0.84
SNX22-207ENST00000561334 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
SNX22-207ENST00000561334 RRP9O43818 475 aaKnown RBP20.28■□□□□ 0.84
SNX22-207ENST00000561334 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
SNX22-207ENST00000561334 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
SNX22-207ENST00000561334 MSH6P52701 1360 aa20.28■□□□□ 0.84
SNX22-207ENST00000561334 DDX11L8A8MPP1 907 aa20.28■□□□□ 0.84
SNX22-207ENST00000561334 HSCBQ8IWL3 235 aa20.28■□□□□ 0.84
SNX22-207ENST00000561334 TMEM57Q8N5G2 664 aa20.28■□□□□ 0.84
SNX22-207ENST00000561334 MIS18AQ9NYP9 233 aa20.27■□□□□ 0.83
SNX22-207ENST00000561334 ITPRIPQ8IWB1 547 aa20.26■□□□□ 0.83
SNX22-207ENST00000561334 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
SNX22-207ENST00000561334 ISY1Q9ULR0 285 aaKnown RBP20.26■□□□□ 0.83
SNX22-207ENST00000561334 GNAT3A8MTJ3 354 aa20.25■□□□□ 0.83
SNX22-207ENST00000561334 SMC5Q8IY18 1101 aa20.25■□□□□ 0.83
SNX22-207ENST00000561334 DDX19BQ9UMR2 479 aa20.25■□□□□ 0.83
SNX22-207ENST00000561334 AXIN2Q9Y2T1 843 aa20.25■□□□□ 0.83
SNX22-207ENST00000561334 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
SNX22-207ENST00000561334 DDIT3P35638 169 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms