RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
GTF2A1-204ENST00000556268 SALL2Q9Y467 1007 aaPredicted RBP14.04□□□□□ -0.16
GTF2A1-204ENST00000556268 ABCC5O15440 1437 aa14.04□□□□□ -0.16
GTF2A1-204ENST00000556268 ARHGAP23Q9P227 1491 aa14.04□□□□□ -0.16
GTF2A1-204ENST00000556268 MROH1Q8NDA8 1641 aa14.04□□□□□ -0.16
GTF2A1-204ENST00000556268 BRICD5Q6PL45 260 aa14.03□□□□□ -0.16
GTF2A1-204ENST00000556268 DUOX2Q9NRD8 1548 aa14.03□□□□□ -0.16
GTF2A1-204ENST00000556268 EIF2AK4Q9P2K8 1649 aaKnown RBP14.03□□□□□ -0.16
GTF2A1-204ENST00000556268 KIF15Q9NS87 1388 aa14.02□□□□□ -0.17
GTF2A1-204ENST00000556268 Q3C1V9 767 aa14.02□□□□□ -0.17
GTF2A1-204ENST00000556268 IQGAP1P46940 1657 aa14.01□□□□□ -0.17
GTF2A1-204ENST00000556268 ZC3H13Q5T200 1668 aaKnown RBP14.01□□□□□ -0.17
GTF2A1-204ENST00000556268 SLIT1O75093 1534 aa14.01□□□□□ -0.17
GTF2A1-204ENST00000556268 SCAF11Q99590 1463 aaKnown RBP14.01□□□□□ -0.17
GTF2A1-204ENST00000556268 PPEF1O14829 653 aaPredicted RBP14.01□□□□□ -0.17
GTF2A1-204ENST00000556268 IDI1Q13907 227 aa14.01□□□□□ -0.17
GTF2A1-204ENST00000556268 EID1Q9Y6B2 187 aa14.01□□□□□ -0.17
GTF2A1-204ENST00000556268 STRCP1A6NGW2 1772 aa14.01□□□□□ -0.17
GTF2A1-204ENST00000556268 MED1Q15648 1581 aaPredicted RBP14□□□□□ -0.17
GTF2A1-204ENST00000556268 FAM160A2Q8N612 972 aaPredicted RBP14□□□□□ -0.17
GTF2A1-204ENST00000556268 PRDM9Q9NQV7 894 aa14□□□□□ -0.17
GTF2A1-204ENST00000556268 TMEM2Q9UHN6 1383 aa13.99□□□□□ -0.17
GTF2A1-204ENST00000556268 PRKD2Q9BZL6 878 aa13.99□□□□□ -0.17
GTF2A1-204ENST00000556268 ERBINQ96RT1 1412 aa13.98□□□□□ -0.17
GTF2A1-204ENST00000556268 CFAP65Q6ZU64 1925 aaKnown RBP13.98□□□□□ -0.17
GTF2A1-204ENST00000556268 KCNA6P17658 529 aa13.98□□□□□ -0.17
GTF2A1-204ENST00000556268 UBR1Q8IWV7 1749 aa13.98□□□□□ -0.17
GTF2A1-204ENST00000556268 MOXD2PA6NHM9 499 aa13.97□□□□□ -0.17
GTF2A1-204ENST00000556268 NDUFV2P19404 249 aa13.97□□□□□ -0.17
GTF2A1-204ENST00000556268 ANKLE1Q8NAG6 615 aa13.97□□□□□ -0.17
GTF2A1-204ENST00000556268 TBC1D2Q9BYX2 928 aa13.97□□□□□ -0.17
GTF2A1-204ENST00000556268 RGS17Q9UGC6 210 aaPredicted RBP13.97□□□□□ -0.17
GTF2A1-204ENST00000556268 FDX1P10109 184 aa13.96□□□□□ -0.17
GTF2A1-204ENST00000556268 MSS51Q4VC12 460 aa13.96□□□□□ -0.17
GTF2A1-204ENST00000556268 FAM135BQ49AJ0 1406 aa13.96□□□□□ -0.18
GTF2A1-204ENST00000556268 GPBP1L1Q9HC44 474 aaPredicted RBP13.95□□□□□ -0.18
GTF2A1-204ENST00000556268 SLC52A1Q9NWF4 448 aa13.95□□□□□ -0.18
GTF2A1-204ENST00000556268 PCDHGC3Q9UN70 934 aa13.95□□□□□ -0.18
GTF2A1-204ENST00000556268 DAPK1P53355 1430 aa13.95□□□□□ -0.18
GTF2A1-204ENST00000556268 KANK1Q14678 1352 aa13.95□□□□□ -0.18
GTF2A1-204ENST00000556268 PRDM15P57071 1507 aaPredicted RBP13.95□□□□□ -0.18
GTF2A1-204ENST00000556268 TPRNQ4KMQ1 711 aa13.94□□□□□ -0.18
GTF2A1-204ENST00000556268 USB1Q9BQ65 265 aaKnown RBP13.94□□□□□ -0.18
GTF2A1-204ENST00000556268 CHIC2Q9UKJ5 165 aa13.94□□□□□ -0.18
GTF2A1-204ENST00000556268 CEP152O94986 1710 aa13.93□□□□□ -0.18
GTF2A1-204ENST00000556268 SYMPKQ92797 1274 aaKnown RBP13.93□□□□□ -0.18
GTF2A1-204ENST00000556268 EMID1Q96A84 441 aaPredicted RBP13.93□□□□□ -0.18
GTF2A1-204ENST00000556268 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
GTF2A1-204ENST00000556268 LMTK2Q8IWU2 1503 aa13.93□□□□□ -0.18
GTF2A1-204ENST00000556268 ANKRD30AQ9BXX3 1397 aa13.93□□□□□ -0.18
GTF2A1-204ENST00000556268 SYNMO15061 1565 aa13.92□□□□□ -0.18
GTF2A1-204ENST00000556268 NOS1P29475 1434 aa13.92□□□□□ -0.18
GTF2A1-204ENST00000556268 FGD6Q6ZV73 1430 aa13.92□□□□□ -0.18
GTF2A1-204ENST00000556268 PLA2G2CQ5R387 149 aa13.92□□□□□ -0.18
GTF2A1-204ENST00000556268 SLC26A8Q96RN1 970 aa13.92□□□□□ -0.18
GTF2A1-204ENST00000556268 TET3O43151 1660 aa13.91□□□□□ -0.18
GTF2A1-204ENST00000556268 DIXDC1Q155Q3 683 aa13.91□□□□□ -0.18
GTF2A1-204ENST00000556268 PROSER2Q86WR7 435 aaPredicted RBP13.91□□□□□ -0.18
GTF2A1-204ENST00000556268 KDM4CQ9H3R0 1056 aa13.91□□□□□ -0.18
GTF2A1-204ENST00000556268 TMEM94Q12767 1356 aa13.91□□□□□ -0.18
GTF2A1-204ENST00000556268 PTPN23Q9H3S7 1636 aa13.9□□□□□ -0.18
GTF2A1-204ENST00000556268 FCF1Q9Y324 198 aaKnown RBP13.9□□□□□ -0.18
GTF2A1-204ENST00000556268 RSBN1LQ6PCB5 846 aaPredicted RBP13.89□□□□□ -0.19
GTF2A1-204ENST00000556268 PIK3C2BO00750 1634 aa13.89□□□□□ -0.19
GTF2A1-204ENST00000556268 KDM5AP29375 1690 aaKnown RBP13.88□□□□□ -0.19
GTF2A1-204ENST00000556268 XIRP1Q702N8 1843 aaKnown RBP13.88□□□□□ -0.19
GTF2A1-204ENST00000556268 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
GTF2A1-204ENST00000556268 EFCAB6Q5THR3 1501 aa13.88□□□□□ -0.19
GTF2A1-204ENST00000556268 SLC19A1P41440 591 aa13.87□□□□□ -0.19
GTF2A1-204ENST00000556268 MMP16P51512 607 aa13.87□□□□□ -0.19
GTF2A1-204ENST00000556268 RETREG3Q86VR2 466 aa13.87□□□□□ -0.19
GTF2A1-204ENST00000556268 DXOO77932 396 aaKnown RBP13.86□□□□□ -0.19
GTF2A1-204ENST00000556268 MYSM1Q5VVJ2 828 aa13.86□□□□□ -0.19
GTF2A1-204ENST00000556268 LIAT1Q6ZQX7 453 aa13.86□□□□□ -0.19
GTF2A1-204ENST00000556268 SLAIN2Q9P270 581 aa13.86□□□□□ -0.19
GTF2A1-204ENST00000556268 TBX22Q9Y458 520 aa13.86□□□□□ -0.19
GTF2A1-204ENST00000556268 ADGRL2O95490 1459 aa13.86□□□□□ -0.19
GTF2A1-204ENST00000556268 SPTLC1O15269 473 aa13.85□□□□□ -0.19
GTF2A1-204ENST00000556268 GJA5P36382 358 aa13.85□□□□□ -0.19
GTF2A1-204ENST00000556268 POTEAQ6S8J7 498 aa13.85□□□□□ -0.19
GTF2A1-204ENST00000556268 IRX2Q9BZI1 471 aaPredicted RBP13.85□□□□□ -0.19
GTF2A1-204ENST00000556268 CROCC2H7BZ55 1655 aa13.85□□□□□ -0.19
GTF2A1-204ENST00000556268 RIC3Q7Z5B4 369 aa13.84□□□□□ -0.19
GTF2A1-204ENST00000556268 RPRD2Q5VT52 1461 aaKnown RBP13.83□□□□□ -0.2
GTF2A1-204ENST00000556268 PCDHB15Q9Y5E8 787 aa13.83□□□□□ -0.2
GTF2A1-204ENST00000556268 ZFYVE9O95405 1425 aa13.82□□□□□ -0.2
GTF2A1-204ENST00000556268 ANKRD50Q9ULJ7 1429 aa13.82□□□□□ -0.2
GTF2A1-204ENST00000556268 MTMR2Q13614 643 aa13.82□□□□□ -0.2
GTF2A1-204ENST00000556268 FAM117AQ9C073 453 aa13.82□□□□□ -0.2
GTF2A1-204ENST00000556268 LIMD1Q9UGP4 676 aa13.82□□□□□ -0.2
GTF2A1-204ENST00000556268 PLEKHG1Q9ULL1 1385 aa13.82□□□□□ -0.2
GTF2A1-204ENST00000556268 JUNDP17535 347 aa13.81□□□□□ -0.2
GTF2A1-204ENST00000556268 FAM50AQ14320 339 aaKnown RBP13.81□□□□□ -0.2
GTF2A1-204ENST00000556268 SPRYD7Q5W111 196 aa13.81□□□□□ -0.2
GTF2A1-204ENST00000556268 NCOA3Q9Y6Q9 1424 aa13.81□□□□□ -0.2
GTF2A1-204ENST00000556268 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
GTF2A1-204ENST00000556268 NKTRP30414 1462 aaKnown RBP13.8□□□□□ -0.2
GTF2A1-204ENST00000556268 ADGRB3O60242 1522 aa13.8□□□□□ -0.2
GTF2A1-204ENST00000556268 CSPP1Q1MSJ5 1256 aa13.79□□□□□ -0.2
GTF2A1-204ENST00000556268 MSH6P52701 1360 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms