RNA–Protein interactions for RNA: ENST00000555718.5

PPP4R3A-210, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-210ENST00000555718 SEMA3FQ13275 785 aa11.51□□□□□ -0.57
PPP4R3A-210ENST00000555718 SLFNL1Q499Z3 407 aa11.51□□□□□ -0.57
PPP4R3A-210ENST00000555718 FNBP4Q8N3X1 1017 aaPredicted RBP11.51□□□□□ -0.57
PPP4R3A-210ENST00000555718 TRAK2O60296 914 aa11.5□□□□□ -0.57
PPP4R3A-210ENST00000555718 FOXD4L5Q5VV16 416 aaPredicted RBP11.5□□□□□ -0.57
PPP4R3A-210ENST00000555718 CCDC125Q86Z20 511 aa11.5□□□□□ -0.57
PPP4R3A-210ENST00000555718 WWC1Q8IX03 1113 aa11.5□□□□□ -0.57
PPP4R3A-210ENST00000555718 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
PPP4R3A-210ENST00000555718 ATP5J2-PTCD1G3V325 749 aa11.49□□□□□ -0.57
PPP4R3A-210ENST00000555718 TERTO14746 1132 aaKnown RBP11.49□□□□□ -0.57
PPP4R3A-210ENST00000555718 POLMQ9NP87 494 aaPredicted RBP11.49□□□□□ -0.57
PPP4R3A-210ENST00000555718 DOLKQ9UPQ8 538 aa11.49□□□□□ -0.57
PPP4R3A-210ENST00000555718 SOX11P35716 441 aa11.48□□□□□ -0.57
PPP4R3A-210ENST00000555718 TREML4Q6UXN2 200 aa11.48□□□□□ -0.57
PPP4R3A-210ENST00000555718 ZMYND15Q9H091 742 aa11.48□□□□□ -0.57
PPP4R3A-210ENST00000555718 STAU1O95793 577 aaKnown RBP11.47□□□□□ -0.57
PPP4R3A-210ENST00000555718 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
PPP4R3A-210ENST00000555718 PROSER2Q86WR7 435 aaPredicted RBP11.47□□□□□ -0.57
PPP4R3A-210ENST00000555718 RNF217Q8TC41 542 aa11.47□□□□□ -0.57
PPP4R3A-210ENST00000555718 RAB6BQ9NRW1 208 aa11.47□□□□□ -0.57
PPP4R3A-210ENST00000555718 NXF1Q9UBU9 619 aaKnown RBP11.47□□□□□ -0.57
PPP4R3A-210ENST00000555718 A0A1W2PRU2 124 aa11.46□□□□□ -0.57
PPP4R3A-210ENST00000555718 PLPP7Q8NBV4 271 aa11.46□□□□□ -0.57
PPP4R3A-210ENST00000555718 ARHGEF10LQ9HCE6 1279 aa11.46□□□□□ -0.57
PPP4R3A-210ENST00000555718 A6NJR5 290 aa11.44□□□□□ -0.58
PPP4R3A-210ENST00000555718 MEN1O00255 615 aa11.44□□□□□ -0.58
PPP4R3A-210ENST00000555718 WFS1O76024 890 aa11.44□□□□□ -0.58
PPP4R3A-210ENST00000555718 CYP2U1Q7Z449 544 aa11.44□□□□□ -0.58
PPP4R3A-210ENST00000555718 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.43□□□□□ -0.582e-8■■□□□ 13.3
PPP4R3A-210ENST00000555718 HDGFL1Q5TGJ6 251 aa11.43□□□□□ -0.58
PPP4R3A-210ENST00000555718 UCN2Q96RP3 112 aa11.43□□□□□ -0.58
PPP4R3A-210ENST00000555718 H3BM21 787 aa11.42□□□□□ -0.58
PPP4R3A-210ENST00000555718 PTSQ03393 145 aa11.42□□□□□ -0.58
PPP4R3A-210ENST00000555718 ERBB4Q15303 1308 aa11.41□□□□□ -0.58
PPP4R3A-210ENST00000555718 MYCP01106 439 aaPredicted RBP11.41□□□□□ -0.58
PPP4R3A-210ENST00000555718 IL2RAP01589 272 aa11.41□□□□□ -0.58
PPP4R3A-210ENST00000555718 SKIP12755 728 aa11.4□□□□□ -0.58
PPP4R3A-210ENST00000555718 RNF144AP50876 292 aaPredicted RBP11.4□□□□□ -0.58
PPP4R3A-210ENST00000555718 CLN3Q13286 438 aa11.4□□□□□ -0.58
PPP4R3A-210ENST00000555718 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
PPP4R3A-210ENST00000555718 PPFIA3O75145 1194 aa11.39□□□□□ -0.59
PPP4R3A-210ENST00000555718 PRICKLE2Q7Z3G6 844 aa11.39□□□□□ -0.59
PPP4R3A-210ENST00000555718 DEPDC4Q8N2C3 294 aa11.39□□□□□ -0.59
PPP4R3A-210ENST00000555718 ESF1Q9H501 851 aaKnown RBP11.39□□□□□ -0.59
PPP4R3A-210ENST00000555718 RHOQP17081 205 aa11.38□□□□□ -0.59
PPP4R3A-210ENST00000555718 USP4Q13107 963 aa11.38□□□□□ -0.59
PPP4R3A-210ENST00000555718 MAP7D1Q3KQU3 841 aa11.38□□□□□ -0.59
PPP4R3A-210ENST00000555718 TBC1D9Q6ZT07 1266 aa11.38□□□□□ -0.59
PPP4R3A-210ENST00000555718 GLMNQ92990 594 aa11.38□□□□□ -0.59
PPP4R3A-210ENST00000555718 TRIM52Q96A61 297 aa11.38□□□□□ -0.59
PPP4R3A-210ENST00000555718 GNRH1P01148 92 aa11.37□□□□□ -0.59
PPP4R3A-210ENST00000555718 ETNK1Q9HBU6 452 aa11.37□□□□□ -0.59
PPP4R3A-210ENST00000555718 HRH3Q9Y5N1 445 aa11.37□□□□□ -0.59
PPP4R3A-210ENST00000555718 LYSMD3Q7Z3D4 306 aa11.36□□□□□ -0.59
PPP4R3A-210ENST00000555718 NPAS3Q8IXF0 933 aa11.36□□□□□ -0.59
PPP4R3A-210ENST00000555718 CCDC155Q8N6L0 562 aa11.36□□□□□ -0.59
PPP4R3A-210ENST00000555718 CNKSR1Q969H4 720 aa11.36□□□□□ -0.59
PPP4R3A-210ENST00000555718 NLRP3Q96P20 1036 aa11.36□□□□□ -0.59
PPP4R3A-210ENST00000555718 SLC35F4A4IF30 521 aa11.35□□□□□ -0.59
PPP4R3A-210ENST00000555718 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
PPP4R3A-210ENST00000555718 SCNN1DP51172 638 aa11.35□□□□□ -0.59
PPP4R3A-210ENST00000555718 NCOA4Q13772 614 aa11.35□□□□□ -0.59
PPP4R3A-210ENST00000555718 NFATC2IPQ8NCF5 419 aa11.35□□□□□ -0.59
PPP4R3A-210ENST00000555718 GRIP2Q9C0E4 1043 aa11.35□□□□□ -0.59
PPP4R3A-210ENST00000555718 ESYT1Q9BSJ8 1104 aa11.34□□□□□ -0.59
PPP4R3A-210ENST00000555718 GPC1P35052 558 aa11.33□□□□□ -0.6
PPP4R3A-210ENST00000555718 XAGE2Q96GT9 111 aa11.33□□□□□ -0.6
PPP4R3A-210ENST00000555718 PCDHGA11Q9Y5H2 935 aa11.33□□□□□ -0.6
PPP4R3A-210ENST00000555718 GMPRP36959 345 aa11.32□□□□□ -0.6
PPP4R3A-210ENST00000555718 CENPCQ03188 943 aa11.32□□□□□ -0.6
PPP4R3A-210ENST00000555718 POU4F2Q12837 409 aa11.32□□□□□ -0.6
PPP4R3A-210ENST00000555718 SLC27A3Q5K4L6 730 aa11.32□□□□□ -0.6
PPP4R3A-210ENST00000555718 SLC16A10Q8TF71 515 aa11.32□□□□□ -0.6
PPP4R3A-210ENST00000555718 FHDC1Q9C0D6 1143 aaPredicted RBP11.32□□□□□ -0.6
PPP4R3A-210ENST00000555718 EML3Q32P44 896 aa11.31□□□□□ -0.6
PPP4R3A-210ENST00000555718 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
PPP4R3A-210ENST00000555718 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
PPP4R3A-210ENST00000555718 VSIG8P0DPA2 414 aa11.3□□□□□ -0.6
PPP4R3A-210ENST00000555718 GDF10P55107 478 aa11.3□□□□□ -0.6
PPP4R3A-210ENST00000555718 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
PPP4R3A-210ENST00000555718 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
PPP4R3A-210ENST00000555718 IRF7Q92985 503 aa11.3□□□□□ -0.6
PPP4R3A-210ENST00000555718 SIRT1Q96EB6 747 aa11.3□□□□□ -0.6
PPP4R3A-210ENST00000555718 CUEDC1Q9NWM3 386 aaPredicted RBP11.3□□□□□ -0.6
PPP4R3A-210ENST00000555718 TMEM229AB2RXF0 380 aa11.29□□□□□ -0.6
PPP4R3A-210ENST00000555718 ATP9BO43861 1147 aa11.29□□□□□ -0.6
PPP4R3A-210ENST00000555718 ZNF777Q9ULD5 760 aaPredicted RBP11.29□□□□□ -0.6
PPP4R3A-210ENST00000555718 ITGA6P23229 1130 aa11.28□□□□□ -0.6
PPP4R3A-210ENST00000555718 GTF2IP78347 998 aa11.28□□□□□ -0.6
PPP4R3A-210ENST00000555718 NBPF10Q6P3W6 841 aaKnown RBP11.28□□□□□ -0.6
PPP4R3A-210ENST00000555718 NBPF15Q8N660 670 aa11.28□□□□□ -0.6
PPP4R3A-210ENST00000555718 GPR161Q8N6U8 529 aaKnown RBP11.28□□□□□ -0.6
PPP4R3A-210ENST00000555718 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
PPP4R3A-210ENST00000555718 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
PPP4R3A-210ENST00000555718 INHAP05111 366 aa11.27□□□□□ -0.61
PPP4R3A-210ENST00000555718 ESCO1Q5FWF5 840 aa11.27□□□□□ -0.61
PPP4R3A-210ENST00000555718 PLEKHM2Q8IWE5 1019 aa11.27□□□□□ -0.61
PPP4R3A-210ENST00000555718 TFIP11Q9UBB9 837 aaKnown RBP11.27□□□□□ -0.61
PPP4R3A-210ENST00000555718 NOD1Q9Y239 953 aa11.27□□□□□ -0.61
PPP4R3A-210ENST00000555718 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms