RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 RAB11FIP4Q86YS3 637 aa13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 FIBPO43427 364 aa13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 FERMT3Q86UX7 667 aa13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 MSNP26038 577 aaKnown RBP13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 SLC4A8Q2Y0W8 1093 aa13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 COL17A1Q9UMD9 1497 aaPredicted RBP13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 MEX3CQ5U5Q3 659 aaKnown RBP13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
TGFBR1-209ENST00000552516 ATP7AQ04656 1500 aa13.1□□□□□ -0.31
TGFBR1-209ENST00000552516 TRAK2O60296 914 aa13.1□□□□□ -0.31
TGFBR1-209ENST00000552516 C8orf34Q49A92 452 aa13.1□□□□□ -0.31
TGFBR1-209ENST00000552516 KLHDC4Q8TBB5 520 aa13.1□□□□□ -0.31
TGFBR1-209ENST00000552516 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
TGFBR1-209ENST00000552516 VAMP4O75379 141 aa13.1□□□□□ -0.31
TGFBR1-209ENST00000552516 RRP12Q5JTH9 1297 aaKnown RBP13.1□□□□□ -0.31
TGFBR1-209ENST00000552516 FAM184AQ8NB25 1140 aa13.1□□□□□ -0.31
TGFBR1-209ENST00000552516 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
TGFBR1-209ENST00000552516 NDUFB9Q9Y6M9 179 aa13.09□□□□□ -0.31
TGFBR1-209ENST00000552516 YTHDC2Q9H6S0 1430 aaKnown RBP13.09□□□□□ -0.31
TGFBR1-209ENST00000552516 RSPH6AQ9H0K4 717 aa13.09□□□□□ -0.31
TGFBR1-209ENST00000552516 KCNQ3O43525 872 aa13.09□□□□□ -0.31
TGFBR1-209ENST00000552516 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
TGFBR1-209ENST00000552516 UHRF1BP1LA0JNW5 1464 aa13.09□□□□□ -0.31
TGFBR1-209ENST00000552516 TBC1D9Q6ZT07 1266 aa13.09□□□□□ -0.31
TGFBR1-209ENST00000552516 L1TD1Q5T7N2 865 aaKnown RBP13.09□□□□□ -0.31
TGFBR1-209ENST00000552516 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
TGFBR1-209ENST00000552516 PIBF1Q8WXW3 757 aa13.09□□□□□ -0.31
TGFBR1-209ENST00000552516 ZKSCAN1P17029 563 aaPredicted RBP13.08□□□□□ -0.31
TGFBR1-209ENST00000552516 GCC1Q96CN9 775 aa13.08□□□□□ -0.31
TGFBR1-209ENST00000552516 VPS37DQ86XT2 251 aa13.08□□□□□ -0.32
TGFBR1-209ENST00000552516 ADGRL2O95490 1459 aa13.08□□□□□ -0.32
TGFBR1-209ENST00000552516 ATP10AO60312 1499 aa13.07□□□□□ -0.32
TGFBR1-209ENST00000552516 METP08581 1390 aa13.07□□□□□ -0.32
TGFBR1-209ENST00000552516 PPP1R42Q7Z4L9 355 aa13.07□□□□□ -0.32
TGFBR1-209ENST00000552516 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
TGFBR1-209ENST00000552516 DDX11Q96FC9 970 aa13.07□□□□□ -0.32
TGFBR1-209ENST00000552516 CHD1O14646 1710 aa13.07□□□□□ -0.32
TGFBR1-209ENST00000552516 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
TGFBR1-209ENST00000552516 SMC3Q9UQE7 1217 aa13.07□□□□□ -0.32
TGFBR1-209ENST00000552516 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
TGFBR1-209ENST00000552516 HSP90AB3PQ58FF7 597 aa13.06□□□□□ -0.32
TGFBR1-209ENST00000552516 ABCA8O94911 1581 aa13.06□□□□□ -0.32
TGFBR1-209ENST00000552516 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
TGFBR1-209ENST00000552516 IQSEC3Q9UPP2 1182 aaPredicted RBP13.06□□□□□ -0.32
TGFBR1-209ENST00000552516 SSFA2P28290 1259 aa13.05□□□□□ -0.32
TGFBR1-209ENST00000552516 CNNM1Q9NRU3 951 aa13.05□□□□□ -0.32
TGFBR1-209ENST00000552516 CCDC82Q8N4S0 544 aa13.05□□□□□ -0.32
TGFBR1-209ENST00000552516 G3V3G9 751 aa13.05□□□□□ -0.32
TGFBR1-209ENST00000552516 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
TGFBR1-209ENST00000552516 CPA1P15085 419 aa13.05□□□□□ -0.32
TGFBR1-209ENST00000552516 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
TGFBR1-209ENST00000552516 CNTROBQ8N137 903 aa13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 PTPRTO14522 1441 aa13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 MX1P20591 662 aa13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 LRRC2Q9BYS8 371 aa13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 GCP02774 474 aa13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 JAKMIP1Q96N16 626 aaKnown RBP13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 ERC2O15083 957 aa13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 IL13P35225 146 aa13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 CHAMP1Q96JM3 812 aa13.04□□□□□ -0.32
TGFBR1-209ENST00000552516 A0A087WZG4 1122 aa13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 BICD2Q8TD16 824 aa13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 GUCY1B3Q02153 619 aa13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 LRRIQ1Q96JM4 1722 aa13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 COPS6Q7L5N1 327 aa13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 SETD1BQ9UPS6 1966 aaKnown RBP13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 POGZQ7Z3K3 1410 aa13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 NBPF6Q5VWK0 638 aa13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 NFXL1Q6ZNB6 911 aa13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 NBPF4Q96M43 638 aa13.03□□□□□ -0.32
TGFBR1-209ENST00000552516 ABCC1P33527 1531 aa13.02□□□□□ -0.32
TGFBR1-209ENST00000552516 DDX11L8A8MPP1 907 aa13.02□□□□□ -0.32
TGFBR1-209ENST00000552516 SDSP20132 328 aa13.02□□□□□ -0.32
TGFBR1-209ENST00000552516 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.32
TGFBR1-209ENST00000552516 PRAMEF22A3QJZ6 481 aa13.02□□□□□ -0.32
TGFBR1-209ENST00000552516 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.32
TGFBR1-209ENST00000552516 RUFY2Q8WXA3 655 aa13.02□□□□□ -0.33
TGFBR1-209ENST00000552516 PPP1R1BQ9UD71 204 aaPredicted RBP13.02□□□□□ -0.33
TGFBR1-209ENST00000552516 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.33
TGFBR1-209ENST00000552516 CASTP20810 708 aaKnown RBP13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 RASSF8Q8NHQ8 419 aa13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 K7ELQ4 463 aaPredicted RBP13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 CPLX1O14810 134 aa13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 PDE4CQ08493 712 aa13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 XAGE3Q8WTP9 111 aa13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 HOXC9P31274 260 aa13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 POLR3AO14802 1390 aaPredicted RBP13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 GCC2Q8IWJ2 1684 aa13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 BCORL1Q5H9F3 1711 aa13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 IDH1O75874 414 aaKnown RBP13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 CCDC83Q8IWF9 413 aa13.01□□□□□ -0.33
TGFBR1-209ENST00000552516 HAND2P61296 217 aa13□□□□□ -0.33
TGFBR1-209ENST00000552516 ALDH1L2Q3SY69 923 aa13□□□□□ -0.33
TGFBR1-209ENST00000552516 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
TGFBR1-209ENST00000552516 CLSTN1O94985 981 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms