RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 STK17AQ9UEE5 414 aa9.01□□□□□ -0.97
SCAF11-214ENST00000550893 CUX1P39880 1505 aa9□□□□□ -0.97
SCAF11-214ENST00000550893 SOBPA7XYQ1 873 aa9□□□□□ -0.97
SCAF11-214ENST00000550893 LILRA1O75019 489 aa9□□□□□ -0.97
SCAF11-214ENST00000550893 VAC14Q08AM6 782 aa9□□□□□ -0.97
SCAF11-214ENST00000550893 AGBL1Q96MI9 1066 aa9□□□□□ -0.97
SCAF11-214ENST00000550893 COG6Q9Y2V7 657 aa9□□□□□ -0.97
SCAF11-214ENST00000550893 RNF20Q5VTR2 975 aa8.99□□□□□ -0.97
SCAF11-214ENST00000550893 CYLDQ9NQC7 956 aa8.99□□□□□ -0.97
SCAF11-214ENST00000550893 CEP126Q9P2H0 1117 aa8.99□□□□□ -0.97
SCAF11-214ENST00000550893 WFS1O76024 890 aa8.98□□□□□ -0.97
SCAF11-214ENST00000550893 EIF4G2P78344 907 aaKnown RBP eCLIP8.98□□□□□ -0.97
SCAF11-214ENST00000550893 RELBQ01201 579 aa8.98□□□□□ -0.97
SCAF11-214ENST00000550893 FLIIQ13045 1269 aa8.98□□□□□ -0.97
SCAF11-214ENST00000550893 POM121Q96HA1 1249 aa8.98□□□□□ -0.97
SCAF11-214ENST00000550893 SOS2Q07890 1332 aaPredicted RBP8.98□□□□□ -0.97
SCAF11-214ENST00000550893 POLA1P09884 1462 aaPredicted RBP8.97□□□□□ -0.97
SCAF11-214ENST00000550893 SPINT1O43278 529 aa8.97□□□□□ -0.97
SCAF11-214ENST00000550893 INSM1Q01101 510 aaPredicted RBP8.97□□□□□ -0.97
SCAF11-214ENST00000550893 MAN1A2O60476 641 aa8.96□□□□□ -0.98
SCAF11-214ENST00000550893 ADH1AP07327 375 aa8.96□□□□□ -0.98
SCAF11-214ENST00000550893 WASHC4Q2M389 1173 aa8.96□□□□□ -0.98
SCAF11-214ENST00000550893 LCE2AQ5TA79 106 aaPredicted RBP8.96□□□□□ -0.98
SCAF11-214ENST00000550893 CCDC125Q86Z20 511 aa8.96□□□□□ -0.98
SCAF11-214ENST00000550893 KDF1Q8NAX2 398 aaPredicted RBP8.96□□□□□ -0.98
SCAF11-214ENST00000550893 ZNF395Q9H8N7 513 aaPredicted RBP8.96□□□□□ -0.98
SCAF11-214ENST00000550893 CHD1O14646 1710 aa8.95□□□□□ -0.98
SCAF11-214ENST00000550893 TERTO14746 1132 aaKnown RBP8.95□□□□□ -0.98
SCAF11-214ENST00000550893 NFX1Q12986 1120 aaKnown RBP8.95□□□□□ -0.98
SCAF11-214ENST00000550893 DNMT3LQ9UJW3 386 aa8.95□□□□□ -0.98
SCAF11-214ENST00000550893 PCDHB11Q9Y5F2 797 aa8.95□□□□□ -0.98
SCAF11-214ENST00000550893 TTLL8A6PVC2 850 aa8.94□□□□□ -0.98
SCAF11-214ENST00000550893 UBTFP17480 764 aaKnown RBP8.94□□□□□ -0.98
SCAF11-214ENST00000550893 ERVK-9P63128 1117 aa8.94□□□□□ -0.98
SCAF11-214ENST00000550893 INSM2Q96T92 566 aaPredicted RBP8.94□□□□□ -0.98
SCAF11-214ENST00000550893 NXF1Q9UBU9 619 aaKnown RBP8.94□□□□□ -0.98
SCAF11-214ENST00000550893 BIVM-ERCC5R4GMW8 1640 aa8.94□□□□□ -0.98
SCAF11-214ENST00000550893 FIGNL2A6NMB9 653 aa8.93□□□□□ -0.98
SCAF11-214ENST00000550893 PTGIRP43119 386 aa8.93□□□□□ -0.98
SCAF11-214ENST00000550893 CTSOP43234 321 aaPredicted RBP8.93□□□□□ -0.98
SCAF11-214ENST00000550893 SCTRP47872 440 aa8.93□□□□□ -0.98
SCAF11-214ENST00000550893 CC2D2BQ6DHV5 1058 aa8.93□□□□□ -0.98
SCAF11-214ENST00000550893 TRIM52Q96A61 297 aa8.93□□□□□ -0.98
SCAF11-214ENST00000550893 CCDC85AQ96PX6 553 aaPredicted RBP8.93□□□□□ -0.98
SCAF11-214ENST00000550893 IFT140Q96RY7 1462 aa8.93□□□□□ -0.98
SCAF11-214ENST00000550893 SYNJ1O43426 1573 aa8.93□□□□□ -0.98
SCAF11-214ENST00000550893 RAD21O60216 631 aa8.92□□□□□ -0.98
SCAF11-214ENST00000550893 TSGA10IPQ3SY00 556 aa8.92□□□□□ -0.98
SCAF11-214ENST00000550893 PHTF2Q8N3S3 785 aa8.92□□□□□ -0.98
SCAF11-214ENST00000550893 CDCA7Q9BWT1 371 aaPredicted RBP8.92□□□□□ -0.98
SCAF11-214ENST00000550893 ABCA5Q8WWZ7 1642 aa8.91□□□□□ -0.98
SCAF11-214ENST00000550893 FGD5Q6ZNL6 1462 aa8.91□□□□□ -0.98
SCAF11-214ENST00000550893 RAD54L2Q9Y4B4 1467 aa8.91□□□□□ -0.98
SCAF11-214ENST00000550893 ATP5J2-PTCD1G3V325 749 aa8.91□□□□□ -0.98
SCAF11-214ENST00000550893 VEGFBP49765 207 aa8.91□□□□□ -0.98
SCAF11-214ENST00000550893 POLMQ9NP87 494 aaPredicted RBP8.91□□□□□ -0.98
SCAF11-214ENST00000550893 PBRM1Q86U86 1689 aa8.91□□□□□ -0.98
SCAF11-214ENST00000550893 SEMA3FQ13275 785 aa8.9□□□□□ -0.98
SCAF11-214ENST00000550893 SLFNL1Q499Z3 407 aa8.9□□□□□ -0.98
SCAF11-214ENST00000550893 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
SCAF11-214ENST00000550893 WIPF1O43516 503 aa8.89□□□□□ -0.99
SCAF11-214ENST00000550893 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.89□□□□□ -0.99
SCAF11-214ENST00000550893 RNF135Q8IUD6 432 aa8.89□□□□□ -0.99
SCAF11-214ENST00000550893 OSBPL3Q9H4L5 887 aa8.89□□□□□ -0.99
SCAF11-214ENST00000550893 ABCC8Q09428 1581 aa8.89□□□□□ -0.99
SCAF11-214ENST00000550893 TRAK2O60296 914 aa8.88□□□□□ -0.99
SCAF11-214ENST00000550893 SOX11P35716 441 aa8.88□□□□□ -0.99
SCAF11-214ENST00000550893 FOXD4L5Q5VV16 416 aaPredicted RBP8.88□□□□□ -0.99
SCAF11-214ENST00000550893 WWC1Q8IX03 1113 aa8.88□□□□□ -0.99
SCAF11-214ENST00000550893 NPAS3Q8IXF0 933 aa8.88□□□□□ -0.99
SCAF11-214ENST00000550893 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
SCAF11-214ENST00000550893 TOP2BQ02880 1626 aa8.87□□□□□ -0.99
SCAF11-214ENST00000550893 H3BM21 787 aa8.87□□□□□ -0.99
SCAF11-214ENST00000550893 CYP2U1Q7Z449 544 aa8.87□□□□□ -0.99
SCAF11-214ENST00000550893 SLC16A10Q8TF71 515 aa8.87□□□□□ -0.99
SCAF11-214ENST00000550893 CLUAP1Q96AJ1 413 aa8.87□□□□□ -0.99
SCAF11-214ENST00000550893 ESF1Q9H501 851 aaKnown RBP8.87□□□□□ -0.99
SCAF11-214ENST00000550893 CHIC2Q9UKJ5 165 aa8.87□□□□□ -0.99
SCAF11-214ENST00000550893 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
SCAF11-214ENST00000550893 AQRO60306 1485 aaKnown RBP eCLIP8.86□□□□□ -0.99
SCAF11-214ENST00000550893 A0A1W2PRU2 124 aa8.86□□□□□ -0.99
SCAF11-214ENST00000550893 PTSQ03393 145 aa8.86□□□□□ -0.99
SCAF11-214ENST00000550893 ALG2Q9H553 416 aa8.86□□□□□ -0.99
SCAF11-214ENST00000550893 POM121CA8CG34 1229 aa8.85□□□□□ -0.99
SCAF11-214ENST00000550893 MEN1O00255 615 aa8.85□□□□□ -0.99
SCAF11-214ENST00000550893 MYCP01106 439 aaPredicted RBP8.85□□□□□ -0.99
SCAF11-214ENST00000550893 RIMBP3CA6NJZ7 1639 aa8.84□□□□□ -0.99
SCAF11-214ENST00000550893 RIMBP3BA6NNM3 1639 aa8.84□□□□□ -0.99
SCAF11-214ENST00000550893 RIMBP3Q9UFD9 1639 aa8.84□□□□□ -0.99
SCAF11-214ENST00000550893 FAM181BA6NEQ2 426 aa8.84□□□□□ -0.99
SCAF11-214ENST00000550893 PIK3CDO00329 1044 aa8.84□□□□□ -0.99
SCAF11-214ENST00000550893 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
SCAF11-214ENST00000550893 RNF144AP50876 292 aaPredicted RBP8.84□□□□□ -0.99
SCAF11-214ENST00000550893 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
SCAF11-214ENST00000550893 ARHGEF10LQ9HCE6 1279 aa8.84□□□□□ -0.99
SCAF11-214ENST00000550893 CLASP1Q7Z460 1538 aa8.84□□□□□ -0.99
SCAF11-214ENST00000550893 ERBB4Q15303 1308 aa8.83□□□□□ -1
SCAF11-214ENST00000550893 USP4Q13107 963 aa8.83□□□□□ -1
SCAF11-214ENST00000550893 PLPP7Q8NBV4 271 aa8.83□□□□□ -1
SCAF11-214ENST00000550893 RAB6BQ9NRW1 208 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms