RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 PPP1R9BQ96SB3 815 aa14.8□□□□□ -0.04
KDM3A-216ENST00000542128 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.8□□□□□ -0.04
KDM3A-216ENST00000542128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.79□□□□□ -0.04
KDM3A-216ENST00000542128 AXDND1Q5T1B0 1012 aaPredicted RBP14.79□□□□□ -0.04
KDM3A-216ENST00000542128 UBXN4Q92575 508 aa14.79□□□□□ -0.04
KDM3A-216ENST00000542128 CCDC192P0DO97 292 aa14.79□□□□□ -0.04
KDM3A-216ENST00000542128 NEK4P51957 841 aa14.79□□□□□ -0.04
KDM3A-216ENST00000542128 TMX1Q9H3N1 280 aa14.79□□□□□ -0.04
KDM3A-216ENST00000542128 NCOA1Q15788 1441 aa14.79□□□□□ -0.04
KDM3A-216ENST00000542128 ATAD2Q6PL18 1390 aa14.79□□□□□ -0.04
KDM3A-216ENST00000542128 FIBPO43427 364 aa14.78□□□□□ -0.04
KDM3A-216ENST00000542128 TXLNBQ8N3L3 684 aa14.78□□□□□ -0.04
KDM3A-216ENST00000542128 PTPN14Q15678 1187 aa14.78□□□□□ -0.04
KDM3A-216ENST00000542128 BICD2Q8TD16 824 aa14.78□□□□□ -0.04
KDM3A-216ENST00000542128 PRDM4Q9UKN5 801 aa14.78□□□□□ -0.04
KDM3A-216ENST00000542128 DHX37Q8IY37 1157 aaKnown RBP14.78□□□□□ -0.04
KDM3A-216ENST00000542128 PTPN23Q9H3S7 1636 aa14.77□□□□□ -0.04
KDM3A-216ENST00000542128 VPS37CA5D8V6 355 aaPredicted RBP14.77□□□□□ -0.04
KDM3A-216ENST00000542128 TDO2P48775 406 aa14.77□□□□□ -0.04
KDM3A-216ENST00000542128 GAS2L3Q86XJ1 694 aa14.77□□□□□ -0.04
KDM3A-216ENST00000542128 ROCK1Q13464 1354 aa14.77□□□□□ -0.05
KDM3A-216ENST00000542128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.05
KDM3A-216ENST00000542128 FAM135AQ9P2D6 1515 aa14.76□□□□□ -0.05
KDM3A-216ENST00000542128 BANK1Q8NDB2 785 aa14.76□□□□□ -0.05
KDM3A-216ENST00000542128 RBSNQ9H1K0 784 aa14.76□□□□□ -0.05
KDM3A-216ENST00000542128 RSPH14Q9UHP6 348 aa14.76□□□□□ -0.05
KDM3A-216ENST00000542128 WASLO00401 505 aaPredicted RBP14.76□□□□□ -0.05
KDM3A-216ENST00000542128 C8orf37Q96NL8 207 aa14.76□□□□□ -0.05
KDM3A-216ENST00000542128 BCL2L12Q9HB09 334 aa14.76□□□□□ -0.05
KDM3A-216ENST00000542128 SMC3Q9UQE7 1217 aa14.76□□□□□ -0.05
KDM3A-216ENST00000542128 RAB3GAP1Q15042 981 aa14.75□□□□□ -0.05
KDM3A-216ENST00000542128 KIF18AQ8NI77 898 aa14.75□□□□□ -0.05
KDM3A-216ENST00000542128 MAP3K1Q13233 1512 aa14.75□□□□□ -0.05
KDM3A-216ENST00000542128 LMTK3Q96Q04 1460 aa14.75□□□□□ -0.05
KDM3A-216ENST00000542128 FAM193AP78312 1265 aa14.75□□□□□ -0.05
KDM3A-216ENST00000542128 CCDC27Q2M243 656 aa14.75□□□□□ -0.05
KDM3A-216ENST00000542128 UHRF1BP1LA0JNW5 1464 aa14.75□□□□□ -0.05
KDM3A-216ENST00000542128 RAD21O60216 631 aa14.75□□□□□ -0.05
KDM3A-216ENST00000542128 PTCD1O75127 700 aaKnown RBP14.74□□□□□ -0.05
KDM3A-216ENST00000542128 MNAT1P51948 309 aa14.74□□□□□ -0.05
KDM3A-216ENST00000542128 CHRNA2Q15822 529 aa14.74□□□□□ -0.05
KDM3A-216ENST00000542128 TTLL5Q6EMB2 1281 aa14.74□□□□□ -0.05
KDM3A-216ENST00000542128 TRAPPC8Q9Y2L5 1435 aa14.74□□□□□ -0.05
KDM3A-216ENST00000542128 KIF6Q6ZMV9 814 aa14.74□□□□□ -0.05
KDM3A-216ENST00000542128 ANO2Q9NQ90 1003 aa14.74□□□□□ -0.05
KDM3A-216ENST00000542128 PAXBP1Q9Y5B6 917 aa14.74□□□□□ -0.05
KDM3A-216ENST00000542128 LRPPRCP42704 1394 aaKnown RBP14.74□□□□□ -0.05
KDM3A-216ENST00000542128 LMAN1P49257 510 aa14.74□□□□□ -0.05
KDM3A-216ENST00000542128 CCDC191Q8NCU4 936 aa14.74□□□□□ -0.05
KDM3A-216ENST00000542128 RILPL2Q969X0 211 aa14.74□□□□□ -0.05
KDM3A-216ENST00000542128 EXOC5O00471 708 aa14.73□□□□□ -0.05
KDM3A-216ENST00000542128 A2MP01023 1474 aa14.73□□□□□ -0.05
KDM3A-216ENST00000542128 ZNF518AQ6AHZ1 1483 aa14.73□□□□□ -0.05
KDM3A-216ENST00000542128 TCP11L2Q8N4U5 519 aa14.73□□□□□ -0.05
KDM3A-216ENST00000542128 UVSSAQ2YD98 709 aa14.73□□□□□ -0.05
KDM3A-216ENST00000542128 API5Q9BZZ5 524 aaKnown RBP14.73□□□□□ -0.05
KDM3A-216ENST00000542128 NINLQ9Y2I6 1382 aa14.73□□□□□ -0.05
KDM3A-216ENST00000542128 RIOK3O14730 519 aaKnown RBP14.73□□□□□ -0.05
KDM3A-216ENST00000542128 CLSTN1O94985 981 aa14.73□□□□□ -0.05
KDM3A-216ENST00000542128 SLFN5Q08AF3 891 aa14.73□□□□□ -0.05
KDM3A-216ENST00000542128 FILIP1Q7Z7B0 1213 aa14.73□□□□□ -0.05
KDM3A-216ENST00000542128 DNAAF4Q8WXU2 420 aa14.73□□□□□ -0.05
KDM3A-216ENST00000542128 MCM2P49736 904 aa14.72□□□□□ -0.05
KDM3A-216ENST00000542128 ZNF526Q8TF50 670 aaPredicted RBP14.72□□□□□ -0.05
KDM3A-216ENST00000542128 ZMYM3Q14202 1370 aa14.72□□□□□ -0.05
KDM3A-216ENST00000542128 HSP90B1P14625 803 aaKnown RBP14.72□□□□□ -0.05
KDM3A-216ENST00000542128 TTC31Q49AM3 519 aaPredicted RBP14.72□□□□□ -0.05
KDM3A-216ENST00000542128 ZNF397Q8NF99 534 aaPredicted RBP14.72□□□□□ -0.05
KDM3A-216ENST00000542128 EIF3JO75822 258 aaKnown RBP14.71□□□□□ -0.05
KDM3A-216ENST00000542128 G3BP1Q13283 466 aaKnown RBP eCLIP14.71□□□□□ -0.05
KDM3A-216ENST00000542128 CT47A1Q5JQC4 288 aaPredicted RBP14.71□□□□□ -0.05
KDM3A-216ENST00000542128 C19orf44Q9H6X5 657 aa14.71□□□□□ -0.05
KDM3A-216ENST00000542128 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.71□□□□□ -0.052e-6■■■□□ 15.7
KDM3A-216ENST00000542128 V9GYY5 206 aaPredicted RBP14.71□□□□□ -0.05
KDM3A-216ENST00000542128 NME9Q86XW9 330 aa14.71□□□□□ -0.05
KDM3A-216ENST00000542128 WDR33Q9C0J8 1336 aaKnown RBP14.71□□□□□ -0.05
KDM3A-216ENST00000542128 ZBTB22O15209 634 aa14.71□□□□□ -0.06
KDM3A-216ENST00000542128 BICDL1Q6ZP65 573 aa14.71□□□□□ -0.06
KDM3A-216ENST00000542128 PIBF1Q8WXW3 757 aa14.71□□□□□ -0.06
KDM3A-216ENST00000542128 MYCBPQ99417 103 aaPredicted RBP14.71□□□□□ -0.06
KDM3A-216ENST00000542128 KDM5BQ9UGL1 1544 aa14.71□□□□□ -0.06
KDM3A-216ENST00000542128 NPHP3Q7Z494 1330 aa14.71□□□□□ -0.06
KDM3A-216ENST00000542128 KIF2AO00139 706 aaPredicted RBP14.7□□□□□ -0.06
KDM3A-216ENST00000542128 SMC5Q8IY18 1101 aa14.7□□□□□ -0.06
KDM3A-216ENST00000542128 ERCC4Q92889 916 aaPredicted RBP14.7□□□□□ -0.06
KDM3A-216ENST00000542128 ZNF428Q96B54 188 aa14.7□□□□□ -0.06
KDM3A-216ENST00000542128 MPRIPQ6WCQ1 1025 aa14.7□□□□□ -0.06
KDM3A-216ENST00000542128 HCLS1P14317 486 aaPredicted RBP14.7□□□□□ -0.06
KDM3A-216ENST00000542128 CCDC183Q5T5S1 534 aa14.7□□□□□ -0.06
KDM3A-216ENST00000542128 DUSP27Q5VZP5 1158 aa14.7□□□□□ -0.06
KDM3A-216ENST00000542128 MAPKBP1O60336 1514 aa14.7□□□□□ -0.06
KDM3A-216ENST00000542128 SYCP2Q9BX26 1530 aa14.7□□□□□ -0.06
KDM3A-216ENST00000542128 CCDC91Q7Z6B0 441 aa14.7□□□□□ -0.06
KDM3A-216ENST00000542128 DRC1Q96MC2 740 aa14.7□□□□□ -0.06
KDM3A-216ENST00000542128 KIAA0754O94854 1291 aa14.69□□□□□ -0.06
KDM3A-216ENST00000542128 HDGFL1Q5TGJ6 251 aa14.69□□□□□ -0.06
KDM3A-216ENST00000542128 C17orf53Q8N3J3 647 aaPredicted RBP14.69□□□□□ -0.06
KDM3A-216ENST00000542128 IBSPP21815 317 aaPredicted RBP14.69□□□□□ -0.06
KDM3A-216ENST00000542128 PPP2R1AP30153 589 aa14.69□□□□□ -0.06
KDM3A-216ENST00000542128 SF3A1Q15459 793 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms