RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ANKRD36BQ8N2N9 1353 aa11.68□□□□□ -0.54
CTNNA1-243ENST00000540387 BCAR3O75815 825 aa11.67□□□□□ -0.54
CTNNA1-243ENST00000540387 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
CTNNA1-243ENST00000540387 CGNL1Q0VF96 1302 aa11.67□□□□□ -0.54
CTNNA1-243ENST00000540387 PPIP5K1Q6PFW1 1433 aa11.67□□□□□ -0.54
CTNNA1-243ENST00000540387 FAM177BA6PVY3 158 aa11.67□□□□□ -0.54
CTNNA1-243ENST00000540387 HSP90AB1P08238 724 aaKnown RBP11.67□□□□□ -0.54
CTNNA1-243ENST00000540387 NWD1Q149M9 1564 aa11.67□□□□□ -0.54
CTNNA1-243ENST00000540387 PMFBP1Q8TBY8 1022 aa11.67□□□□□ -0.54
CTNNA1-243ENST00000540387 C19orf44Q9H6X5 657 aa11.67□□□□□ -0.54
CTNNA1-243ENST00000540387 NINLQ9Y2I6 1382 aa11.67□□□□□ -0.54
CTNNA1-243ENST00000540387 ATP7BP35670 1465 aa11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 NSD3Q9BZ95 1437 aa11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 ZBTB7CA1YPR0 619 aa11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 HMGN5P82970 282 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 HDGFL2Q7Z4V5 671 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 CERS3Q8IU89 383 aa11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 CD163L1Q9NR16 1453 aa11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 ADGRL3Q9HAR2 1447 aa11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 ZNF521Q96K83 1311 aa11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 PDCL2Q8N4E4 241 aa11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 ADGRB2O60241 1585 aa11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 NKTRP30414 1462 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-243ENST00000540387 GOLGA6L22H0YM25 854 aa11.65□□□□□ -0.54
CTNNA1-243ENST00000540387 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.54
CTNNA1-243ENST00000540387 PDZRN3Q9UPQ7 1066 aa11.65□□□□□ -0.54
CTNNA1-243ENST00000540387 PLEKHG3A1L390 1219 aa11.65□□□□□ -0.54
CTNNA1-243ENST00000540387 ADAMTS8Q9UP79 889 aa11.65□□□□□ -0.54
CTNNA1-243ENST00000540387 KIF3AQ9Y496 699 aa11.65□□□□□ -0.54
CTNNA1-243ENST00000540387 STRCP1A6NGW2 1772 aa11.65□□□□□ -0.54
CTNNA1-243ENST00000540387 ACEP12821 1306 aa11.65□□□□□ -0.55
CTNNA1-243ENST00000540387 U2AF2P26368 475 aaKnown RBP eCLIP11.64□□□□□ -0.552e-14■■■□□ 16.5
CTNNA1-243ENST00000540387 SLFN5Q08AF3 891 aa11.64□□□□□ -0.55
CTNNA1-243ENST00000540387 ZSCAN23Q3MJ62 389 aa11.64□□□□□ -0.55
CTNNA1-243ENST00000540387 BCL2L12Q9HB09 334 aa11.64□□□□□ -0.55
CTNNA1-243ENST00000540387 SNX21Q969T3 373 aa11.64□□□□□ -0.55
CTNNA1-243ENST00000540387 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-243ENST00000540387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.63□□□□□ -0.552e-7■■■□□ 18.5
CTNNA1-243ENST00000540387 SSFA2P28290 1259 aa11.63□□□□□ -0.55
CTNNA1-243ENST00000540387 ESCO1Q5FWF5 840 aa11.63□□□□□ -0.55
CTNNA1-243ENST00000540387 CAVIN1Q6NZI2 390 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-243ENST00000540387 COG6Q9Y2V7 657 aa11.63□□□□□ -0.55
CTNNA1-243ENST00000540387 CPSF1Q10570 1443 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-243ENST00000540387 ATF3P18847 181 aa11.63□□□□□ -0.55
CTNNA1-243ENST00000540387 PDE3AQ14432 1141 aa11.63□□□□□ -0.55
CTNNA1-243ENST00000540387 NGDNQ8NEJ9 315 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-243ENST00000540387 ORAI2Q96SN7 254 aa11.63□□□□□ -0.55
CTNNA1-243ENST00000540387 FYB1O15117 783 aa11.62□□□□□ -0.55
CTNNA1-243ENST00000540387 PANK1Q8TE04 598 aa11.62□□□□□ -0.55
CTNNA1-243ENST00000540387 GGNBP2Q9H3C7 697 aa11.62□□□□□ -0.55
CTNNA1-243ENST00000540387 NALCNQ8IZF0 1738 aa11.62□□□□□ -0.55
CTNNA1-243ENST00000540387 CLEC17AQ6ZS10 378 aa11.62□□□□□ -0.55
CTNNA1-243ENST00000540387 AEBP1Q8IUX7 1158 aa11.62□□□□□ -0.55
CTNNA1-243ENST00000540387 TRMT2AQ8IZ69 625 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-243ENST00000540387 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-243ENST00000540387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.62□□□□□ -0.559e-8■■□□□ 13.4
CTNNA1-243ENST00000540387 BAG4O95429 457 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-243ENST00000540387 GABPB1Q06547 395 aaPredicted RBP11.61□□□□□ -0.55
CTNNA1-243ENST00000540387 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
CTNNA1-243ENST00000540387 FOXD4L1Q9NU39 408 aa11.61□□□□□ -0.55
CTNNA1-243ENST00000540387 PHF8Q9UPP1 1060 aa11.61□□□□□ -0.55
CTNNA1-243ENST00000540387 NPC1L1Q9UHC9 1359 aa11.61□□□□□ -0.55
CTNNA1-243ENST00000540387 ANKARQ7Z5J8 1434 aa11.61□□□□□ -0.55
CTNNA1-243ENST00000540387 LRRC7Q96NW7 1537 aa11.61□□□□□ -0.55
CTNNA1-243ENST00000540387 CCDC66A2RUB6 948 aa11.61□□□□□ -0.55
CTNNA1-243ENST00000540387 TIGD1Q96MW7 591 aa11.61□□□□□ -0.55
CTNNA1-243ENST00000540387 USP32Q8NFA0 1604 aa11.6□□□□□ -0.55
CTNNA1-243ENST00000540387 CDC42BPGQ6DT37 1551 aa11.6□□□□□ -0.55
CTNNA1-243ENST00000540387 MORC1Q86VD1 984 aa11.6□□□□□ -0.55
CTNNA1-243ENST00000540387 FEZ1Q99689 392 aa11.6□□□□□ -0.55
CTNNA1-243ENST00000540387 SLFN14P0C7P3 912 aa11.6□□□□□ -0.55
CTNNA1-243ENST00000540387 CAPN2P17655 700 aa11.6□□□□□ -0.55
CTNNA1-243ENST00000540387 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
CTNNA1-243ENST00000540387 OGFRQ9NZT2 677 aa11.6□□□□□ -0.55
CTNNA1-243ENST00000540387 PCDHB15Q9Y5E8 787 aa11.6□□□□□ -0.55
CTNNA1-243ENST00000540387 MSH6P52701 1360 aa11.59□□□□□ -0.55
CTNNA1-243ENST00000540387 PTMAP06454 111 aaKnown RBP11.59□□□□□ -0.55
CTNNA1-243ENST00000540387 NME9Q86XW9 330 aa11.59□□□□□ -0.55
CTNNA1-243ENST00000540387 ANKRD7Q92527 254 aa11.59□□□□□ -0.55
CTNNA1-243ENST00000540387 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
CTNNA1-243ENST00000540387 FOXO3O43524 673 aa11.59□□□□□ -0.55
CTNNA1-243ENST00000540387 PPP2R1AP30153 589 aa11.59□□□□□ -0.55
CTNNA1-243ENST00000540387 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-243ENST00000540387 TRIM6-TRIM34B2RNG4 842 aa11.58□□□□□ -0.56
CTNNA1-243ENST00000540387 TULP2O00295 520 aa11.58□□□□□ -0.56
CTNNA1-243ENST00000540387 TRIM34Q9BYJ4 488 aa11.58□□□□□ -0.56
CTNNA1-243ENST00000540387 POLR3AO14802 1390 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-243ENST00000540387 NOLC1Q14978 699 aaKnown RBP eCLIP11.58□□□□□ -0.56
CTNNA1-243ENST00000540387 PIBF1Q8WXW3 757 aa11.58□□□□□ -0.56
CTNNA1-243ENST00000540387 FMN2Q9NZ56 1722 aa11.58□□□□□ -0.56
CTNNA1-243ENST00000540387 TTC21BQ7Z4L5 1316 aa11.58□□□□□ -0.56
CTNNA1-243ENST00000540387 RGPD8O14715 1765 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-243ENST00000540387 EDC4Q6P2E9 1401 aaKnown RBP11.57□□□□□ -0.56
CTNNA1-243ENST00000540387 C1orf167Q5SNV9 1468 aa11.57□□□□□ -0.56
CTNNA1-243ENST00000540387 USP6P35125 1406 aa11.57□□□□□ -0.56
CTNNA1-243ENST00000540387 FBLN1P23142 703 aa11.57□□□□□ -0.56
CTNNA1-243ENST00000540387 MCTP1Q6DN14 999 aa11.57□□□□□ -0.56
CTNNA1-243ENST00000540387 PSME1Q06323 249 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms