RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CCP110O43303 1012 aa15.52■□□□□ 0.07
DNMT1-203ENST00000540357 LTV1Q96GA3 475 aaPredicted RBP15.52■□□□□ 0.07
DNMT1-203ENST00000540357 PDRG1Q9NUG6 133 aa15.52■□□□□ 0.07
DNMT1-203ENST00000540357 TEFQ10587 303 aa15.51■□□□□ 0.07
DNMT1-203ENST00000540357 LMOD2Q6P5Q4 547 aa15.51■□□□□ 0.07
DNMT1-203ENST00000540357 PODXL2Q9NZ53 605 aa15.51■□□□□ 0.07
DNMT1-203ENST00000540357 LARP1BQ659C4 914 aaKnown RBP15.51■□□□□ 0.07
DNMT1-203ENST00000540357 USP19O94966 1318 aa15.51■□□□□ 0.07
DNMT1-203ENST00000540357 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
DNMT1-203ENST00000540357 WDR7Q9Y4E6 1490 aa15.51■□□□□ 0.07
DNMT1-203ENST00000540357 ANAPC15P60006 121 aa15.51■□□□□ 0.07
DNMT1-203ENST00000540357 NUTM2FA1L443 756 aa15.5■□□□□ 0.07
DNMT1-203ENST00000540357 NOLC1Q14978 699 aaKnown RBP eCLIP15.5■□□□□ 0.077e-9■■■■□ 21.9
DNMT1-203ENST00000540357 ANKRD44Q8N8A2 993 aa15.5■□□□□ 0.07
DNMT1-203ENST00000540357 EXOC6BQ9Y2D4 811 aa15.5■□□□□ 0.07
DNMT1-203ENST00000540357 CCDC94Q9BW85 323 aaPredicted RBP15.5■□□□□ 0.07
DNMT1-203ENST00000540357 UPF3BQ9BZI7 483 aaKnown RBP15.5■□□□□ 0.07
DNMT1-203ENST00000540357 DCTPP1Q9H773 170 aa15.5■□□□□ 0.07
DNMT1-203ENST00000540357 KINO60870 393 aaKnown RBP15.5■□□□□ 0.07
DNMT1-203ENST00000540357 UBE2HP62256 183 aa15.5■□□□□ 0.07
DNMT1-203ENST00000540357 USP26Q9BXU7 913 aa15.5■□□□□ 0.07
DNMT1-203ENST00000540357 RAB11FIP3O75154 756 aa15.49■□□□□ 0.07
DNMT1-203ENST00000540357 DDX58O95786 925 aaKnown RBP15.49■□□□□ 0.07
DNMT1-203ENST00000540357 PPP4R3BQ5MIZ7 849 aa15.49■□□□□ 0.07
DNMT1-203ENST00000540357 SMAP1Q8IYB5 467 aaPredicted RBP15.49■□□□□ 0.07
DNMT1-203ENST00000540357 RBSNQ9H1K0 784 aa15.49■□□□□ 0.07
DNMT1-203ENST00000540357 NEXNQ0ZGT2 675 aa15.49■□□□□ 0.07
DNMT1-203ENST00000540357 SH2B1Q9NRF2 756 aaPredicted RBP15.49■□□□□ 0.07
DNMT1-203ENST00000540357 ADGRL1O94910 1474 aa15.49■□□□□ 0.07
DNMT1-203ENST00000540357 ZBTB7BO15156 539 aaPredicted RBP15.49■□□□□ 0.07
DNMT1-203ENST00000540357 PLEKHM2Q8IWE5 1019 aa15.48■□□□□ 0.07
DNMT1-203ENST00000540357 SPATA32Q96LK8 384 aa15.48■□□□□ 0.07
DNMT1-203ENST00000540357 CGNQ9P2M7 1197 aaKnown RBP15.48■□□□□ 0.07
DNMT1-203ENST00000540357 LIMCH1Q9UPQ0 1083 aa15.48■□□□□ 0.07
DNMT1-203ENST00000540357 ABCC10Q5T3U5 1492 aa15.48■□□□□ 0.07
DNMT1-203ENST00000540357 GORABQ5T7V8 394 aa15.48■□□□□ 0.07
DNMT1-203ENST00000540357 A0A0U1RQG5 324 aaPredicted RBP15.48■□□□□ 0.07
DNMT1-203ENST00000540357 LRRFIP1Q32MZ4 808 aaKnown RBP15.48■□□□□ 0.07
DNMT1-203ENST00000540357 EID1Q9Y6B2 187 aa15.48■□□□□ 0.07
DNMT1-203ENST00000540357 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
DNMT1-203ENST00000540357 FSD1Q9BTV5 496 aa15.47■□□□□ 0.07
DNMT1-203ENST00000540357 JAKMIP1Q96N16 626 aaKnown RBP15.47■□□□□ 0.07
DNMT1-203ENST00000540357 ZNF396Q96N95 335 aaPredicted RBP15.47■□□□□ 0.07
DNMT1-203ENST00000540357 SDF4Q9BRK5 362 aa15.47■□□□□ 0.07
DNMT1-203ENST00000540357 TRPM1Q7Z4N2 1603 aa15.47■□□□□ 0.07
DNMT1-203ENST00000540357 VAMP4O75379 141 aa15.47■□□□□ 0.07
DNMT1-203ENST00000540357 CASTP20810 708 aaKnown RBP15.47■□□□□ 0.07
DNMT1-203ENST00000540357 C1orf141Q5JVX7 400 aa15.47■□□□□ 0.07
DNMT1-203ENST00000540357 INTS4Q96HW7 963 aaKnown RBP15.47■□□□□ 0.07
DNMT1-203ENST00000540357 CLASP1Q7Z460 1538 aa15.46■□□□□ 0.07
DNMT1-203ENST00000540357 KIF2AO00139 706 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-203ENST00000540357 STX6O43752 255 aa15.46■□□□□ 0.07
DNMT1-203ENST00000540357 FYB1O15117 783 aa15.46■□□□□ 0.06
DNMT1-203ENST00000540357 ZNF500O60304 480 aaPredicted RBP15.46■□□□□ 0.06
DNMT1-203ENST00000540357 RRS1Q15050 365 aaKnown RBP15.46■□□□□ 0.06
DNMT1-203ENST00000540357 SCAND2PQ9GZW5 306 aaPredicted RBP15.46■□□□□ 0.06
DNMT1-203ENST00000540357 MAP4K4O95819 1239 aaPredicted RBP15.45■□□□□ 0.06
DNMT1-203ENST00000540357 CCAR2Q8N163 923 aaKnown RBP15.45■□□□□ 0.06
DNMT1-203ENST00000540357 GDPD2Q9HCC8 539 aa15.45■□□□□ 0.06
DNMT1-203ENST00000540357 HOOK1Q9UJC3 728 aaKnown RBP15.45■□□□□ 0.06
DNMT1-203ENST00000540357 CWC27Q6UX04 472 aaKnown RBP15.45■□□□□ 0.06
DNMT1-203ENST00000540357 CFAP45Q9UL16 551 aa15.45■□□□□ 0.06
DNMT1-203ENST00000540357 GTPBP4Q9BZE4 634 aaKnown RBP15.45■□□□□ 0.06
DNMT1-203ENST00000540357 LMBRD1Q9NUN5 540 aa15.45■□□□□ 0.06
DNMT1-203ENST00000540357 IBTKQ9P2D0 1353 aaPredicted RBP15.45■□□□□ 0.06
DNMT1-203ENST00000540357 USP48Q86UV5 1035 aa15.45■□□□□ 0.06
DNMT1-203ENST00000540357 CWC15Q9P013 229 aaKnown RBP15.45■□□□□ 0.06
DNMT1-203ENST00000540357 ZFYVE9O95405 1425 aa15.44■□□□□ 0.06
DNMT1-203ENST00000540357 DCTN1Q14203 1278 aa15.44■□□□□ 0.06
DNMT1-203ENST00000540357 ZGPATQ8N5A5 531 aaKnown RBP15.44■□□□□ 0.06
DNMT1-203ENST00000540357 IL1RAPL2Q9NP60 686 aa15.44■□□□□ 0.06
DNMT1-203ENST00000540357 PTPRTO14522 1441 aa15.44■□□□□ 0.06
DNMT1-203ENST00000540357 KIF1BPQ96EK5 621 aa15.44■□□□□ 0.06
DNMT1-203ENST00000540357 ESYT1Q9BSJ8 1104 aa15.44■□□□□ 0.06
DNMT1-203ENST00000540357 ZSCAN22P10073 491 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-203ENST00000540357 PDE1AP54750 535 aa15.44■□□□□ 0.06
DNMT1-203ENST00000540357 CPLX2Q6PUV4 134 aaKnown RBP15.44■□□□□ 0.06
DNMT1-203ENST00000540357 BLOC1S2Q6QNY1 142 aa15.44■□□□□ 0.06
DNMT1-203ENST00000540357 GAS2L3Q86XJ1 694 aa15.44■□□□□ 0.06
DNMT1-203ENST00000540357 CCDC83Q8IWF9 413 aa15.44■□□□□ 0.06
DNMT1-203ENST00000540357 NEMFO60524 1076 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 TRAPPC8Q9Y2L5 1435 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 CPLX1O14810 134 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 TPM1P09493 284 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 HCLS1P14317 486 aaPredicted RBP15.43■□□□□ 0.06
DNMT1-203ENST00000540357 HDGFL1Q5TGJ6 251 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 SYNE3Q6ZMZ3 975 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 TRIM35Q9UPQ4 493 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 EMILIN1Q9Y6C2 1016 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.43■□□□□ 0.06
DNMT1-203ENST00000540357 FANCAO15360 1455 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 SRGAP3O43295 1099 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 SMC2O95347 1197 aa15.43■□□□□ 0.06
DNMT1-203ENST00000540357 ZHX1Q9UKY1 873 aaPredicted RBP15.43■□□□□ 0.06
DNMT1-203ENST00000540357 NUTM1Q86Y26 1132 aa15.42■□□□□ 0.06
DNMT1-203ENST00000540357 FBXW7Q969H0 707 aa15.42■□□□□ 0.06
DNMT1-203ENST00000540357 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.42■□□□□ 0.06
DNMT1-203ENST00000540357 GLRX3O76003 335 aaKnown RBP15.42■□□□□ 0.06
DNMT1-203ENST00000540357 MCM10Q7L590 875 aa15.42■□□□□ 0.06
DNMT1-203ENST00000540357 PAXBP1Q9Y5B6 917 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms