RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 SLKQ9H2G2 1235 aaPredicted RBP23.48■■□□□ 1.35
COPS7A-204ENST00000534947 SNX21Q969T3 373 aa23.47■■□□□ 1.35
COPS7A-204ENST00000534947 C1orf115Q9H7X2 142 aa23.47■■□□□ 1.35
COPS7A-204ENST00000534947 IGSF1Q8N6C5 1336 aa23.47■■□□□ 1.35
COPS7A-204ENST00000534947 RPAP2Q8IXW5 612 aaPredicted RBP23.46■■□□□ 1.35
COPS7A-204ENST00000534947 DCTPP1Q9H773 170 aa23.46■■□□□ 1.35
COPS7A-204ENST00000534947 NUTM2FA1L443 756 aa23.45■■□□□ 1.35
COPS7A-204ENST00000534947 HTATSF1O43719 755 aaKnown RBP23.45■■□□□ 1.35
COPS7A-204ENST00000534947 NGDNQ8NEJ9 315 aaKnown RBP23.45■■□□□ 1.35
COPS7A-204ENST00000534947 LRRC37A3O60309 1634 aa23.45■■□□□ 1.34
COPS7A-204ENST00000534947 MCM10Q7L590 875 aa23.45■■□□□ 1.34
COPS7A-204ENST00000534947 GAS2L2Q8NHY3 880 aa23.45■■□□□ 1.34
COPS7A-204ENST00000534947 HSCBQ8IWL3 235 aa23.44■■□□□ 1.34
COPS7A-204ENST00000534947 ANKRD44Q8N8A2 993 aa23.44■■□□□ 1.34
COPS7A-204ENST00000534947 ATP10DQ9P241 1426 aa23.44■■□□□ 1.34
COPS7A-204ENST00000534947 NCOA3Q9Y6Q9 1424 aa23.44■■□□□ 1.34
COPS7A-204ENST00000534947 MARF1Q9Y4F3 1742 aaKnown RBP23.43■■□□□ 1.34
COPS7A-204ENST00000534947 RTF1Q92541 710 aaKnown RBP23.42■■□□□ 1.34
COPS7A-204ENST00000534947 CHMP5Q9NZZ3 219 aa23.42■■□□□ 1.34
COPS7A-204ENST00000534947 SOS1Q07889 1333 aaPredicted RBP23.4■■□□□ 1.34
COPS7A-204ENST00000534947 AMPHP49418 695 aa23.4■■□□□ 1.34
COPS7A-204ENST00000534947 MTHFSDQ2M296 383 aaKnown RBP23.4■■□□□ 1.34
COPS7A-204ENST00000534947 CEP170BQ9Y4F5 1589 aaPredicted RBP23.4■■□□□ 1.34
COPS7A-204ENST00000534947 RTL1A6NKG5 1358 aa23.39■■□□□ 1.34
COPS7A-204ENST00000534947 CACNA1FO60840 1977 aa23.39■■□□□ 1.34
COPS7A-204ENST00000534947 CDC45O75419 566 aa23.38■■□□□ 1.33
COPS7A-204ENST00000534947 TBC1D9Q6ZT07 1266 aa23.38■■□□□ 1.33
COPS7A-204ENST00000534947 KRT24Q2M2I5 525 aa23.37■■□□□ 1.33
COPS7A-204ENST00000534947 EYA1Q99502 592 aa23.37■■□□□ 1.33
COPS7A-204ENST00000534947 MSH6P52701 1360 aa23.37■■□□□ 1.33
COPS7A-204ENST00000534947 CEP85Q6P2H3 762 aa23.37■■□□□ 1.33
COPS7A-204ENST00000534947 BABAM1Q9NWV8 329 aa23.37■■□□□ 1.33
COPS7A-204ENST00000534947 PLEKHM2Q8IWE5 1019 aa23.36■■□□□ 1.33
COPS7A-204ENST00000534947 TSPYL4Q9UJ04 414 aa23.36■■□□□ 1.33
COPS7A-204ENST00000534947 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
COPS7A-204ENST00000534947 CCT4P50991 539 aaKnown RBP23.35■■□□□ 1.33
COPS7A-204ENST00000534947 SLC4A2P04920 1241 aa23.34■■□□□ 1.33
COPS7A-204ENST00000534947 NLRP6P59044 892 aa23.34■■□□□ 1.33
COPS7A-204ENST00000534947 CIZ1Q9ULV3 898 aaPredicted RBP23.34■■□□□ 1.33
COPS7A-204ENST00000534947 SOX12O15370 315 aa23.33■■□□□ 1.33
COPS7A-204ENST00000534947 N4BP2Q86UW6 1770 aaPredicted RBP23.33■■□□□ 1.33
COPS7A-204ENST00000534947 FAM208AQ9UK61 1670 aaKnown RBP23.33■■□□□ 1.33
COPS7A-204ENST00000534947 HMMRO75330 724 aa23.33■■□□□ 1.32
COPS7A-204ENST00000534947 DDIT3P35638 169 aa23.33■■□□□ 1.32
COPS7A-204ENST00000534947 TTC22Q5TAA0 569 aa23.33■■□□□ 1.32
COPS7A-204ENST00000534947 CHD2O14647 1828 aaKnown RBP23.33■■□□□ 1.32
COPS7A-204ENST00000534947 HOXC9P31274 260 aa23.32■■□□□ 1.32
COPS7A-204ENST00000534947 KIF2CQ99661 725 aa23.32■■□□□ 1.32
COPS7A-204ENST00000534947 FOXO3O43524 673 aa23.32■■□□□ 1.32
COPS7A-204ENST00000534947 KCNA6P17658 529 aa23.32■■□□□ 1.32
COPS7A-204ENST00000534947 GSPT1P15170 499 aaKnown RBP23.31■■□□□ 1.32
COPS7A-204ENST00000534947 MCM4P33991 863 aa23.31■■□□□ 1.32
COPS7A-204ENST00000534947 GNAT3A8MTJ3 354 aa23.3■■□□□ 1.32
COPS7A-204ENST00000534947 MEIS3Q99687 375 aa23.3■■□□□ 1.32
COPS7A-204ENST00000534947 ZNF142P52746 1687 aaPredicted RBP23.29■■□□□ 1.32
COPS7A-204ENST00000534947 STK31Q9BXU1 1019 aa23.29■■□□□ 1.32
COPS7A-204ENST00000534947 MAP3K5Q99683 1374 aa23.29■■□□□ 1.32
COPS7A-204ENST00000534947 CCDC30Q5VVM6 783 aa23.28■■□□□ 1.32
COPS7A-204ENST00000534947 PXDNLA1KZ92 1463 aa23.27■■□□□ 1.32
COPS7A-204ENST00000534947 PHRF1Q9P1Y6 1649 aaKnown RBP23.26■■□□□ 1.31
COPS7A-204ENST00000534947 LTN1O94822 1766 aa23.26■■□□□ 1.31
COPS7A-204ENST00000534947 DDX11L8A8MPP1 907 aa23.25■■□□□ 1.31
COPS7A-204ENST00000534947 HSP90AB1P08238 724 aaKnown RBP23.25■■□□□ 1.31
COPS7A-204ENST00000534947 PLPPR3Q6T4P5 718 aa23.25■■□□□ 1.31
COPS7A-204ENST00000534947 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
COPS7A-204ENST00000534947 SPRYD3Q8NCJ5 442 aa23.25■■□□□ 1.31
COPS7A-204ENST00000534947 MIS18AQ9NYP9 233 aa23.25■■□□□ 1.31
COPS7A-204ENST00000534947 CASC1Q6TDU7 716 aa23.25■■□□□ 1.31
COPS7A-204ENST00000534947 OSBPL3Q9H4L5 887 aa23.24■■□□□ 1.31
COPS7A-204ENST00000534947 K7ELQ4 463 aaPredicted RBP23.23■■□□□ 1.31
COPS7A-204ENST00000534947 L1TD1Q5T7N2 865 aaKnown RBP23.23■■□□□ 1.31
COPS7A-204ENST00000534947 G2E3Q7L622 706 aa23.23■■□□□ 1.31
COPS7A-204ENST00000534947 GNAI2P04899 355 aa23.23■■□□□ 1.31
COPS7A-204ENST00000534947 GNAI3P08754 354 aa23.23■■□□□ 1.31
COPS7A-204ENST00000534947 NFAT5O94916 1531 aa23.23■■□□□ 1.31
COPS7A-204ENST00000534947 RABEP1Q15276 862 aa23.22■■□□□ 1.31
COPS7A-204ENST00000534947 TAF7Q15545 349 aaPredicted RBP23.22■■□□□ 1.31
COPS7A-204ENST00000534947 PHF8Q9UPP1 1060 aa23.22■■□□□ 1.31
COPS7A-204ENST00000534947 PTMSP20962 102 aa23.21■■□□□ 1.31
COPS7A-204ENST00000534947 FLIIQ13045 1269 aa23.21■■□□□ 1.31
COPS7A-204ENST00000534947 MED1Q15648 1581 aaPredicted RBP23.21■■□□□ 1.31
COPS7A-204ENST00000534947 ANKLE2Q86XL3 938 aa23.2■■□□□ 1.3
COPS7A-204ENST00000534947 CHMP4AQ9BY43 222 aa23.2■■□□□ 1.3
COPS7A-204ENST00000534947 IL27Q8NEV9 243 aa23.2■■□□□ 1.3
COPS7A-204ENST00000534947 IP6K1Q92551 441 aa23.2■■□□□ 1.3
COPS7A-204ENST00000534947 ADGRL3Q9HAR2 1447 aa23.19■■□□□ 1.3
COPS7A-204ENST00000534947 SLC4A10Q6U841 1118 aa23.19■■□□□ 1.3
COPS7A-204ENST00000534947 C16orf71Q8IYS4 520 aaPredicted RBP23.19■■□□□ 1.3
COPS7A-204ENST00000534947 IL17REQ8NFR9 667 aa23.19■■□□□ 1.3
COPS7A-204ENST00000534947 CEMIPQ8WUJ3 1361 aa23.18■■□□□ 1.3
COPS7A-204ENST00000534947 SDSP20132 328 aa23.18■■□□□ 1.3
COPS7A-204ENST00000534947 USP26Q9BXU7 913 aa23.18■■□□□ 1.3
COPS7A-204ENST00000534947 F6X3S4 739 aa23.18■■□□□ 1.3
COPS7A-204ENST00000534947 RAB3GAP1Q15042 981 aa23.18■■□□□ 1.3
COPS7A-204ENST00000534947 BRPF3Q9ULD4 1205 aa23.17■■□□□ 1.3
COPS7A-204ENST00000534947 REC8O95072 547 aa23.16■■□□□ 1.3
COPS7A-204ENST00000534947 KCNH5Q8NCM2 988 aa23.16■■□□□ 1.3
COPS7A-204ENST00000534947 GBP4Q96PP9 640 aa23.16■■□□□ 1.3
COPS7A-204ENST00000534947 TUBGCP6Q96RT7 1819 aa23.16■■□□□ 1.3
COPS7A-204ENST00000534947 HOXB7P09629 217 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms