RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 CEP126Q9P2H0 1117 aa6.23□□□□□ -1.41
C11orf54-213ENST00000533585 NOD1Q9Y239 953 aa6.23□□□□□ -1.41
C11orf54-213ENST00000533585 HMGB1P1B2RPK0 211 aaPredicted RBP6.22□□□□□ -1.41
C11orf54-213ENST00000533585 NBPF26B4DH59 902 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 MAPK8P45983 427 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 FXR2P51116 673 aaKnown RBP eCLIP6.22□□□□□ -1.41
C11orf54-213ENST00000533585 FMR1Q06787 632 aaKnown RBP eCLIP6.22□□□□□ -1.41
C11orf54-213ENST00000533585 MAP7D1Q3KQU3 841 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 HSP90AB4PQ58FF6 505 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 FILIP1Q7Z7B0 1213 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 VPS37DQ86XT2 251 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 SMC5Q8IY18 1101 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 ZNF454Q8N9F8 522 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 TMC1Q8TDI8 760 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 IFT57Q9NWB7 429 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 PNMA3Q9UL41 463 aa6.22□□□□□ -1.41
C11orf54-213ENST00000533585 MRPL42Q9Y6G3 142 aaKnown RBP6.22□□□□□ -1.41
C11orf54-213ENST00000533585 TREHO43280 583 aa6.21□□□□□ -1.42
C11orf54-213ENST00000533585 NDUFB5O43674 189 aa6.21□□□□□ -1.42
C11orf54-213ENST00000533585 DAB2P98082 770 aa6.21□□□□□ -1.42
C11orf54-213ENST00000533585 PLCB3Q01970 1234 aa6.21□□□□□ -1.42
C11orf54-213ENST00000533585 GRIPAP1Q4V328 841 aa6.21□□□□□ -1.42
C11orf54-213ENST00000533585 SIX5Q8N196 739 aa6.21□□□□□ -1.42
C11orf54-213ENST00000533585 PCDH12Q9NPG4 1184 aa6.21□□□□□ -1.42
C11orf54-213ENST00000533585 PTCD1O75127 700 aaKnown RBP6.2□□□□□ -1.42
C11orf54-213ENST00000533585 EIF3JO75822 258 aaKnown RBP6.2□□□□□ -1.42
C11orf54-213ENST00000533585 FAM13AO94988 1023 aa6.2□□□□□ -1.42
C11orf54-213ENST00000533585 PLEKHG6Q3KR16 790 aa6.2□□□□□ -1.42
C11orf54-213ENST00000533585 TEX2Q8IWB9 1127 aa6.2□□□□□ -1.42
C11orf54-213ENST00000533585 CCAR1Q8IX12 1150 aaKnown RBP6.2□□□□□ -1.42
C11orf54-213ENST00000533585 ZNF654Q8IZM8 581 aa6.2□□□□□ -1.42
C11orf54-213ENST00000533585 PHTF2Q8N3S3 785 aa6.2□□□□□ -1.42
C11orf54-213ENST00000533585 HINFPQ9BQA5 517 aa6.2□□□□□ -1.42
C11orf54-213ENST00000533585 ADAM33Q9BZ11 813 aa6.2□□□□□ -1.42
C11orf54-213ENST00000533585 FKBPLQ9UIM3 349 aa6.2□□□□□ -1.42
C11orf54-213ENST00000533585 PCDHGA4Q9Y5G9 962 aa6.2□□□□□ -1.42
C11orf54-213ENST00000533585 DNAJC6O75061 913 aa6.19□□□□□ -1.42
C11orf54-213ENST00000533585 DKK1O94907 266 aa6.19□□□□□ -1.42
C11orf54-213ENST00000533585 S100BP04271 92 aaPredicted RBP6.19□□□□□ -1.42
C11orf54-213ENST00000533585 XRCC5P13010 732 aaKnown RBP6.19□□□□□ -1.42
C11orf54-213ENST00000533585 PLCG2P16885 1265 aa6.19□□□□□ -1.42
C11orf54-213ENST00000533585 ATP2B2Q01814 1243 aa6.19□□□□□ -1.42
C11orf54-213ENST00000533585 APBB1IPQ7Z5R6 666 aaPredicted RBP6.19□□□□□ -1.42
C11orf54-213ENST00000533585 SYMPKQ92797 1274 aaKnown RBP6.19□□□□□ -1.42
C11orf54-213ENST00000533585 TATDN2Q93075 761 aa6.19□□□□□ -1.42
C11orf54-213ENST00000533585 CCDC136Q96JN2 1154 aa6.19□□□□□ -1.42
C11orf54-213ENST00000533585 IRF2BPLQ9H1B7 796 aa6.19□□□□□ -1.42
C11orf54-213ENST00000533585 SPC25Q9HBM1 224 aa6.19□□□□□ -1.42
C11orf54-213ENST00000533585 GABBR1Q9UBS5 961 aa6.19□□□□□ -1.42
C11orf54-213ENST00000533585 G3BP2Q9UN86 482 aaKnown RBP6.19□□□□□ -1.42
C11orf54-213ENST00000533585 SFI1A8K8P3 1242 aa6.18□□□□□ -1.42
C11orf54-213ENST00000533585 PPP1R12AO14974 1030 aaPredicted RBP6.18□□□□□ -1.42
C11orf54-213ENST00000533585 ZBTB7BO15156 539 aaPredicted RBP6.18□□□□□ -1.42
C11orf54-213ENST00000533585 CENPBP07199 599 aaPredicted RBP6.18□□□□□ -1.42
C11orf54-213ENST00000533585 RALBP1Q15311 655 aa6.18□□□□□ -1.42
C11orf54-213ENST00000533585 CCDC102BQ68D86 513 aa6.18□□□□□ -1.42
C11orf54-213ENST00000533585 MCF2L2Q86YR7 1114 aa6.18□□□□□ -1.42
C11orf54-213ENST00000533585 PMM1Q92871 262 aa6.18□□□□□ -1.42
C11orf54-213ENST00000533585 RNF19AQ9NV58 838 aa6.18□□□□□ -1.42
C11orf54-213ENST00000533585 TSKSQ9UJT2 592 aa6.18□□□□□ -1.42
C11orf54-213ENST00000533585 KIAA1024Q9UPX6 916 aa6.18□□□□□ -1.42
C11orf54-213ENST00000533585 PCDHB9Q9Y5E1 797 aa6.18□□□□□ -1.42
C11orf54-213ENST00000533585 C3orf80F5H4A9 247 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 U2SURPO15042 1029 aaKnown RBP6.17□□□□□ -1.42
C11orf54-213ENST00000533585 LGR5O75473 907 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 NEFLP07196 543 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 GTF2IP78347 998 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 EHHADHQ08426 723 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 TRAF7Q6Q0C0 670 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 CCDC146Q8IYE0 955 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 HELQQ8TDG4 1101 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 CITED4Q96RK1 184 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 SPOCK3Q9BQ16 436 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.17□□□□□ -1.427e-6■■□□□ 11.5
C11orf54-213ENST00000533585 PRKD2Q9BZL6 878 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 UBA5Q9GZZ9 404 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 CYLDQ9NQC7 956 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 DDX56Q9NY93 547 aaKnown RBP6.17□□□□□ -1.42
C11orf54-213ENST00000533585 EMILIN1Q9Y6C2 1016 aa6.17□□□□□ -1.42
C11orf54-213ENST00000533585 K7ELQ4 463 aaPredicted RBP6.16□□□□□ -1.42
C11orf54-213ENST00000533585 ENPP3O14638 875 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 CREB3O43889 395 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 DSC3Q14574 896 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 NAA30Q147X3 362 aaPredicted RBP6.16□□□□□ -1.42
C11orf54-213ENST00000533585 IER5LQ5T953 404 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
C11orf54-213ENST00000533585 DESI1Q6ICB0 168 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 LYPD8Q6UX82 237 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 CAPN12Q6ZSI9 719 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 PACS2Q86VP3 889 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 CKAP2LQ8IYA6 745 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 TPCN2Q8NHX9 752 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 DMRTB1Q96MA1 342 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 DDX41Q9UJV9 622 aaKnown RBP6.16□□□□□ -1.42
C11orf54-213ENST00000533585 CHIC2Q9UKJ5 165 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 WWC3Q9ULE0 1092 aa6.16□□□□□ -1.42
C11orf54-213ENST00000533585 SLC10A3P09131 477 aa6.15□□□□□ -1.42
C11orf54-213ENST00000533585 FGRP09769 529 aa6.15□□□□□ -1.42
C11orf54-213ENST00000533585 NPR3P17342 541 aa6.15□□□□□ -1.42
C11orf54-213ENST00000533585 FKBP5Q13451 457 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms