RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 SSH2Q76I76 1423 aa23.88■■□□□ 1.41
LTBP3-217ENST00000530785 LMOD3Q0VAK6 560 aa23.87■■□□□ 1.41
LTBP3-217ENST00000530785 VAMP4O75379 141 aa23.86■■□□□ 1.41
LTBP3-217ENST00000530785 TERF1P54274 439 aa23.86■■□□□ 1.41
LTBP3-217ENST00000530785 AEBP1Q8IUX7 1158 aa23.86■■□□□ 1.41
LTBP3-217ENST00000530785 TSPYL6Q8N831 410 aa23.86■■□□□ 1.41
LTBP3-217ENST00000530785 BRPF1P55201 1214 aaPredicted RBP23.86■■□□□ 1.41
LTBP3-217ENST00000530785 FAM83GA6ND36 823 aa23.85■■□□□ 1.41
LTBP3-217ENST00000530785 XRN1Q8IZH2 1706 aaKnown RBP23.85■■□□□ 1.41
LTBP3-217ENST00000530785 OFD1O75665 1012 aa23.85■■□□□ 1.41
LTBP3-217ENST00000530785 HDAC1Q13547 482 aaPredicted RBP23.85■■□□□ 1.41
LTBP3-217ENST00000530785 USP31Q70CQ4 1352 aa23.85■■□□□ 1.41
LTBP3-217ENST00000530785 RGPD8O14715 1765 aaPredicted RBP23.85■■□□□ 1.41
LTBP3-217ENST00000530785 PPP1R9BQ96SB3 815 aa23.84■■□□□ 1.41
LTBP3-217ENST00000530785 ZBTB40Q9NUA8 1239 aa23.84■■□□□ 1.41
LTBP3-217ENST00000530785 ANKLE2Q86XL3 938 aa23.84■■□□□ 1.41
LTBP3-217ENST00000530785 SULT6B1Q6IMI4 303 aa23.83■■□□□ 1.41
LTBP3-217ENST00000530785 HSCBQ8IWL3 235 aa23.83■■□□□ 1.41
LTBP3-217ENST00000530785 CFAP44Q96MT7 982 aa23.83■■□□□ 1.41
LTBP3-217ENST00000530785 RGPD1P0DJD0 1748 aa23.83■■□□□ 1.41
LTBP3-217ENST00000530785 CCDC173Q0VFZ6 552 aa23.83■■□□□ 1.4
LTBP3-217ENST00000530785 DCTN1Q14203 1278 aa23.82■■□□□ 1.4
LTBP3-217ENST00000530785 SKOR2Q2VWA4 1001 aaPredicted RBP23.82■■□□□ 1.4
LTBP3-217ENST00000530785 MRPL50Q8N5N7 158 aaKnown RBP23.82■■□□□ 1.4
LTBP3-217ENST00000530785 ELL2O00472 640 aaPredicted RBP23.82■■□□□ 1.4
LTBP3-217ENST00000530785 HSP90AB2PQ58FF8 381 aa23.82■■□□□ 1.4
LTBP3-217ENST00000530785 SOX12O15370 315 aa23.81■■□□□ 1.4
LTBP3-217ENST00000530785 ZSCAN30Q86W11 494 aa23.81■■□□□ 1.4
LTBP3-217ENST00000530785 CIZ1Q9ULV3 898 aaPredicted RBP23.8■■□□□ 1.4
LTBP3-217ENST00000530785 TTC21AQ8NDW8 1320 aa23.8■■□□□ 1.4
LTBP3-217ENST00000530785 TWISTNBQ3B726 338 aaPredicted RBP23.79■■□□□ 1.4
LTBP3-217ENST00000530785 TNPO1Q92973 898 aaKnown RBP23.79■■□□□ 1.4
LTBP3-217ENST00000530785 FMN2Q9NZ56 1722 aa23.79■■□□□ 1.4
LTBP3-217ENST00000530785 PTMSP20962 102 aa23.79■■□□□ 1.4
LTBP3-217ENST00000530785 MAP7D2Q96T17 732 aa23.79■■□□□ 1.4
LTBP3-217ENST00000530785 HSPA2P54652 639 aa23.78■■□□□ 1.4
LTBP3-217ENST00000530785 MFAP1P55081 439 aaKnown RBP23.78■■□□□ 1.4
LTBP3-217ENST00000530785 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.78■■□□□ 1.4
LTBP3-217ENST00000530785 C8orf58Q8NAV2 365 aa23.78■■□□□ 1.4
LTBP3-217ENST00000530785 GBP4Q96PP9 640 aa23.77■■□□□ 1.4
LTBP3-217ENST00000530785 PIK3R4Q99570 1358 aa23.77■■□□□ 1.4
LTBP3-217ENST00000530785 SMC5Q8IY18 1101 aa23.77■■□□□ 1.4
LTBP3-217ENST00000530785 NGDNQ8NEJ9 315 aaKnown RBP23.77■■□□□ 1.4
LTBP3-217ENST00000530785 ARHGAP45Q92619 1136 aa23.77■■□□□ 1.4
LTBP3-217ENST00000530785 PIK3C2AO00443 1686 aa23.77■■□□□ 1.4
LTBP3-217ENST00000530785 MAP3K19Q56UN5 1328 aa23.76■■□□□ 1.39
LTBP3-217ENST00000530785 SNX21Q969T3 373 aa23.76■■□□□ 1.39
LTBP3-217ENST00000530785 RAB3GAP1Q15042 981 aa23.75■■□□□ 1.39
LTBP3-217ENST00000530785 KCNA6P17658 529 aa23.74■■□□□ 1.39
LTBP3-217ENST00000530785 ABCC4O15439 1325 aa23.73■■□□□ 1.39
LTBP3-217ENST00000530785 ARHGEF10O15013 1369 aa23.72■■□□□ 1.39
LTBP3-217ENST00000530785 FLT4P35916 1363 aa23.72■■□□□ 1.39
LTBP3-217ENST00000530785 ANKARQ7Z5J8 1434 aa23.72■■□□□ 1.39
LTBP3-217ENST00000530785 ZBTB7BO15156 539 aaPredicted RBP23.72■■□□□ 1.39
LTBP3-217ENST00000530785 NASPP49321 788 aaPredicted RBP23.72■■□□□ 1.39
LTBP3-217ENST00000530785 SBNO1A3KN83 1393 aa23.72■■□□□ 1.39
LTBP3-217ENST00000530785 IBTKQ9P2D0 1353 aaPredicted RBP23.72■■□□□ 1.39
LTBP3-217ENST00000530785 RBM25P49756 843 aaKnown RBP23.71■■□□□ 1.39
LTBP3-217ENST00000530785 MCM10Q7L590 875 aa23.71■■□□□ 1.39
LTBP3-217ENST00000530785 RBM10P98175 930 aaKnown RBP23.7■■□□□ 1.38
LTBP3-217ENST00000530785 MSNP26038 577 aaKnown RBP23.69■■□□□ 1.38
LTBP3-217ENST00000530785 CHL1O00533 1208 aa23.68■■□□□ 1.38
LTBP3-217ENST00000530785 HS1BP3Q53T59 392 aa23.68■■□□□ 1.38
LTBP3-217ENST00000530785 C1orf115Q9H7X2 142 aa23.68■■□□□ 1.38
LTBP3-217ENST00000530785 MARF1Q9Y4F3 1742 aaKnown RBP23.68■■□□□ 1.38
LTBP3-217ENST00000530785 NPHP4O75161 1426 aaPredicted RBP23.67■■□□□ 1.38
LTBP3-217ENST00000530785 KRT24Q2M2I5 525 aa23.67■■□□□ 1.38
LTBP3-217ENST00000530785 NUCB1Q02818 461 aa23.67■■□□□ 1.38
LTBP3-217ENST00000530785 CHMP4BQ9H444 224 aaKnown RBP23.67■■□□□ 1.38
LTBP3-217ENST00000530785 LMTK3Q96Q04 1460 aa23.66■■□□□ 1.38
LTBP3-217ENST00000530785 API5Q9BZZ5 524 aaKnown RBP23.66■■□□□ 1.38
LTBP3-217ENST00000530785 KDRP35968 1356 aa23.66■■□□□ 1.38
LTBP3-217ENST00000530785 AMPHP49418 695 aa23.66■■□□□ 1.38
LTBP3-217ENST00000530785 ANP32BQ92688 251 aaKnown RBP23.66■■□□□ 1.38
LTBP3-217ENST00000530785 SMAP1Q8IYB5 467 aaPredicted RBP23.65■■□□□ 1.38
LTBP3-217ENST00000530785 CRB1P82279 1406 aa23.65■■□□□ 1.38
LTBP3-217ENST00000530785 NLRP6P59044 892 aa23.65■■□□□ 1.38
LTBP3-217ENST00000530785 IGSF1Q8N6C5 1336 aa23.64■■□□□ 1.37
LTBP3-217ENST00000530785 FOXO3O43524 673 aa23.64■■□□□ 1.37
LTBP3-217ENST00000530785 ZNF500O60304 480 aaPredicted RBP23.64■■□□□ 1.37
LTBP3-217ENST00000530785 FAM13BQ9NYF5 915 aa23.64■■□□□ 1.37
LTBP3-217ENST00000530785 KIAA0232Q92628 1395 aa23.63■■□□□ 1.37
LTBP3-217ENST00000530785 MTHFSDQ2M296 383 aaKnown RBP23.63■■□□□ 1.37
LTBP3-217ENST00000530785 CLEC17AQ6ZS10 378 aa23.63■■□□□ 1.37
LTBP3-217ENST00000530785 LNPKQ9C0E8 428 aa23.63■■□□□ 1.37
LTBP3-217ENST00000530785 USP54Q70EL1 1684 aa23.63■■□□□ 1.37
LTBP3-217ENST00000530785 HSP90AB1P08238 724 aaKnown RBP23.62■■□□□ 1.37
LTBP3-217ENST00000530785 NUTM2GQ5VZR2 741 aa23.62■■□□□ 1.37
LTBP3-217ENST00000530785 EYA1Q99502 592 aa23.62■■□□□ 1.37
LTBP3-217ENST00000530785 PDE4CQ08493 712 aa23.62■■□□□ 1.37
LTBP3-217ENST00000530785 MTERF4Q7Z6M4 381 aaKnown RBP23.62■■□□□ 1.37
LTBP3-217ENST00000530785 CHD1LQ86WJ1 897 aa23.62■■□□□ 1.37
LTBP3-217ENST00000530785 R3HCC1Q9Y3T6 440 aaKnown RBP23.62■■□□□ 1.37
LTBP3-217ENST00000530785 CHD2O14647 1828 aaKnown RBP23.62■■□□□ 1.37
LTBP3-217ENST00000530785 RBM33Q96EV2 1170 aaKnown RBP23.61■■□□□ 1.37
LTBP3-217ENST00000530785 FGD1P98174 961 aa23.61■■□□□ 1.37
LTBP3-217ENST00000530785 KLHL40Q2TBA0 621 aa23.61■■□□□ 1.37
LTBP3-217ENST00000530785 NOL7Q9UMY1 257 aaKnown RBP23.6■■□□□ 1.37
LTBP3-217ENST00000530785 RGS12O14924 1447 aa23.6■■□□□ 1.37
LTBP3-217ENST00000530785 HAP1P54257 671 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms