RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 K7ELQ4 463 aaPredicted RBP9.24□□□□□ -0.93
C11orf54-207ENST00000528288 L1TD1Q5T7N2 865 aaKnown RBP9.24□□□□□ -0.93
C11orf54-207ENST00000528288 NOL8Q76FK4 1167 aaKnown RBP9.24□□□□□ -0.93
C11orf54-207ENST00000528288 SDSP20132 328 aa9.24□□□□□ -0.93
C11orf54-207ENST00000528288 AMPHP49418 695 aa9.24□□□□□ -0.93
C11orf54-207ENST00000528288 PKP1Q13835 747 aa9.24□□□□□ -0.93
C11orf54-207ENST00000528288 TTC22Q5TAA0 569 aa9.24□□□□□ -0.93
C11orf54-207ENST00000528288 GAS2L3Q86XJ1 694 aa9.24□□□□□ -0.93
C11orf54-207ENST00000528288 USHBP1Q8N6Y0 703 aa9.24□□□□□ -0.93
C11orf54-207ENST00000528288 SNX21Q969T3 373 aa9.24□□□□□ -0.93
C11orf54-207ENST00000528288 AATKQ6ZMQ8 1374 aa9.23□□□□□ -0.93
C11orf54-207ENST00000528288 PIK3R4Q99570 1358 aa9.23□□□□□ -0.93
C11orf54-207ENST00000528288 DDIT3P35638 169 aa9.23□□□□□ -0.93
C11orf54-207ENST00000528288 ANKRD44Q8N8A2 993 aa9.23□□□□□ -0.93
C11orf54-207ENST00000528288 RTF1Q92541 710 aaKnown RBP9.23□□□□□ -0.93
C11orf54-207ENST00000528288 CHMP4BQ9H444 224 aaKnown RBP9.23□□□□□ -0.93
C11orf54-207ENST00000528288 NCLP19338 710 aaKnown RBP9.23□□□□□ -0.93
C11orf54-207ENST00000528288 CDC42BPGQ6DT37 1551 aa9.23□□□□□ -0.93
C11orf54-207ENST00000528288 INTS3Q68E01 1043 aaKnown RBP9.23□□□□□ -0.93
C11orf54-207ENST00000528288 TNRQ92752 1358 aa9.23□□□□□ -0.93
C11orf54-207ENST00000528288 AK9Q5TCS8 1911 aa9.22□□□□□ -0.93
C11orf54-207ENST00000528288 EYA1Q99502 592 aa9.22□□□□□ -0.93
C11orf54-207ENST00000528288 AMOTL2Q9Y2J4 779 aa9.22□□□□□ -0.93
C11orf54-207ENST00000528288 NRXN3Q9Y4C0 1643 aa9.22□□□□□ -0.93
C11orf54-207ENST00000528288 KNDC1Q76NI1 1749 aa9.22□□□□□ -0.93
C11orf54-207ENST00000528288 FSD2A1L4K1 749 aa9.22□□□□□ -0.93
C11orf54-207ENST00000528288 DLC1Q96QB1 1528 aa9.22□□□□□ -0.93
C11orf54-207ENST00000528288 HDGFP51858 240 aaKnown RBP9.22□□□□□ -0.93
C11orf54-207ENST00000528288 RAB3GAP1Q15042 981 aa9.22□□□□□ -0.93
C11orf54-207ENST00000528288 FAM43AQ8N2R8 423 aa9.22□□□□□ -0.93
C11orf54-207ENST00000528288 RTL1A6NKG5 1358 aa9.21□□□□□ -0.93
C11orf54-207ENST00000528288 DDX11L8A8MPP1 907 aa9.21□□□□□ -0.93
C11orf54-207ENST00000528288 NLRP6P59044 892 aa9.21□□□□□ -0.93
C11orf54-207ENST00000528288 ZGPATQ8N5A5 531 aaKnown RBP9.21□□□□□ -0.93
C11orf54-207ENST00000528288 TPRNQ4KMQ1 711 aa9.21□□□□□ -0.93
C11orf54-207ENST00000528288 USP26Q9BXU7 913 aa9.21□□□□□ -0.93
C11orf54-207ENST00000528288 RGS12O14924 1447 aa9.21□□□□□ -0.94
C11orf54-207ENST00000528288 SPATA31D1Q6ZQQ2 1576 aa9.21□□□□□ -0.94
C11orf54-207ENST00000528288 DIP2BQ9P265 1576 aa9.21□□□□□ -0.94
C11orf54-207ENST00000528288 SETD1AO15047 1707 aaKnown RBP9.21□□□□□ -0.94
C11orf54-207ENST00000528288 TMEM2Q9UHN6 1383 aa9.21□□□□□ -0.94
C11orf54-207ENST00000528288 FKBP5Q13451 457 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-207ENST00000528288 GRPEL1Q9HAV7 217 aa9.21□□□□□ -0.94
C11orf54-207ENST00000528288 FOXD4L6Q3SYB3 417 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-207ENST00000528288 MCTP1Q6DN14 999 aa9.21□□□□□ -0.94
C11orf54-207ENST00000528288 FOXD4L3Q6VB84 417 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-207ENST00000528288 PPP6R1Q9UPN7 881 aa9.21□□□□□ -0.94
C11orf54-207ENST00000528288 ATP10DQ9P241 1426 aa9.2□□□□□ -0.94
C11orf54-207ENST00000528288 DTNBO60941 627 aa9.2□□□□□ -0.94
C11orf54-207ENST00000528288 MAP4K4O95819 1239 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-207ENST00000528288 GBP4Q96PP9 640 aa9.2□□□□□ -0.94
C11orf54-207ENST00000528288 RIMS1Q86UR5 1692 aaKnown RBP9.2□□□□□ -0.94
C11orf54-207ENST00000528288 NCOA3Q9Y6Q9 1424 aa9.2□□□□□ -0.94
C11orf54-207ENST00000528288 PNMA6EA0A0J9YXQ4 647 aa9.2□□□□□ -0.94
C11orf54-207ENST00000528288 RPAP2Q8IXW5 612 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-207ENST00000528288 RILPL2Q969X0 211 aa9.2□□□□□ -0.94
C11orf54-207ENST00000528288 IL1RAPL2Q9NP60 686 aa9.19□□□□□ -0.94
C11orf54-207ENST00000528288 EIF2S2P20042 333 aaKnown RBP9.19□□□□□ -0.94
C11orf54-207ENST00000528288 ADAMTS13Q76LX8 1427 aa9.19□□□□□ -0.94
C11orf54-207ENST00000528288 PTPRUQ92729 1446 aa9.19□□□□□ -0.94
C11orf54-207ENST00000528288 TRIM6-TRIM34B2RNG4 842 aa9.19□□□□□ -0.94
C11orf54-207ENST00000528288 ANXA1P04083 346 aa9.19□□□□□ -0.94
C11orf54-207ENST00000528288 DDX49Q9Y6V7 483 aaKnown RBP9.19□□□□□ -0.94
C11orf54-207ENST00000528288 USP6P35125 1406 aa9.19□□□□□ -0.94
C11orf54-207ENST00000528288 PLEKHG3A1L390 1219 aa9.18□□□□□ -0.94
C11orf54-207ENST00000528288 BAG4O95429 457 aaKnown RBP9.18□□□□□ -0.94
C11orf54-207ENST00000528288 CRB1P82279 1406 aa9.18□□□□□ -0.94
C11orf54-207ENST00000528288 STK31Q9BXU1 1019 aa9.18□□□□□ -0.94
C11orf54-207ENST00000528288 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.17□□□□□ -0.94
C11orf54-207ENST00000528288 MRE11P49959 708 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 PDE1AP54750 535 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 FLIIQ13045 1269 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 PHAXQ9H814 394 aaKnown RBP9.17□□□□□ -0.94
C11orf54-207ENST00000528288 LRRFIP2Q9Y608 721 aaKnown RBP9.17□□□□□ -0.94
C11orf54-207ENST00000528288 PEAK1Q9H792 1746 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 RABEP1Q15276 862 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 EID1Q9Y6B2 187 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 OVOS2A0A0J9YW53 1432 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 OVOS2Q6IE36 1432 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 NUTM1Q86Y26 1132 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 UNC5CLQ8IV45 518 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 ABTB2Q8N961 1025 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 IL17REQ8NFR9 667 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 RBM27Q9P2N5 1060 aaKnown RBP9.17□□□□□ -0.94
C11orf54-207ENST00000528288 AGLP35573 1532 aa9.17□□□□□ -0.94
C11orf54-207ENST00000528288 PTPRCP08575 1304 aa9.16□□□□□ -0.94
C11orf54-207ENST00000528288 GNAI2P04899 355 aa9.16□□□□□ -0.94
C11orf54-207ENST00000528288 NEK4P51957 841 aa9.16□□□□□ -0.94
C11orf54-207ENST00000528288 LARP6Q9BRS8 491 aaKnown RBP9.16□□□□□ -0.94
C11orf54-207ENST00000528288 CIZ1Q9ULV3 898 aaPredicted RBP9.16□□□□□ -0.94
C11orf54-207ENST00000528288 C3P01024 1663 aa9.16□□□□□ -0.94
C11orf54-207ENST00000528288 ERBB4Q15303 1308 aa9.16□□□□□ -0.94
C11orf54-207ENST00000528288 CAVIN1Q6NZI2 390 aaKnown RBP9.16□□□□□ -0.94
C11orf54-207ENST00000528288 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
C11orf54-207ENST00000528288 PALD1Q9ULE6 856 aa9.16□□□□□ -0.94
C11orf54-207ENST00000528288 CEP170BQ9Y4F5 1589 aaPredicted RBP9.16□□□□□ -0.94
C11orf54-207ENST00000528288 PRPF40AO75400 957 aaKnown RBP9.16□□□□□ -0.94
C11orf54-207ENST00000528288 XPCQ01831 940 aaPredicted RBP9.16□□□□□ -0.94
C11orf54-207ENST00000528288 NAP1L5Q96NT1 182 aaPredicted RBP9.16□□□□□ -0.94
C11orf54-207ENST00000528288 MON2Q7Z3U7 1717 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms