RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ZSCAN25Q6NSZ9 544 aa20.61■□□□□ 0.89
BEST1-203ENST00000524877 SLAIN2Q9P270 581 aa20.61■□□□□ 0.89
BEST1-203ENST00000524877 SYAP1Q96A49 352 aaPredicted RBP20.61■□□□□ 0.89
BEST1-203ENST00000524877 ARHGEF5Q12774 1597 aa20.61■□□□□ 0.89
BEST1-203ENST00000524877 HYPKQ9NX55 129 aa20.61■□□□□ 0.89
BEST1-203ENST00000524877 RALGAPBQ86X10 1494 aa20.6■□□□□ 0.89
BEST1-203ENST00000524877 POLD1P28340 1107 aa20.6■□□□□ 0.89
BEST1-203ENST00000524877 SART3Q15020 963 aaKnown RBP20.6■□□□□ 0.89
BEST1-203ENST00000524877 BTG4Q9NY30 223 aa20.6■□□□□ 0.89
BEST1-203ENST00000524877 CEP126Q9P2H0 1117 aa20.6■□□□□ 0.89
BEST1-203ENST00000524877 MYD88Q99836 296 aa20.59■□□□□ 0.89
BEST1-203ENST00000524877 TRMT112Q9UI30 125 aaKnown RBP20.59■□□□□ 0.89
BEST1-203ENST00000524877 KDM5DQ9BY66 1539 aa20.59■□□□□ 0.89
BEST1-203ENST00000524877 ANKIB1Q9P2G1 1089 aa20.59■□□□□ 0.89
BEST1-203ENST00000524877 ATP6V1AP38606 617 aa20.59■□□□□ 0.89
BEST1-203ENST00000524877 ARHGEF10O15013 1369 aa20.58■□□□□ 0.89
BEST1-203ENST00000524877 KIAA2012Q0VF49 1180 aa20.58■□□□□ 0.89
BEST1-203ENST00000524877 PUS7Q96PZ0 661 aaKnown RBP20.58■□□□□ 0.89
BEST1-203ENST00000524877 LNPKQ9C0E8 428 aa20.58■□□□□ 0.89
BEST1-203ENST00000524877 DRC7Q8IY82 874 aa20.58■□□□□ 0.88
BEST1-203ENST00000524877 DCTN1Q14203 1278 aa20.57■□□□□ 0.88
BEST1-203ENST00000524877 NPHP4O75161 1426 aaPredicted RBP20.57■□□□□ 0.88
BEST1-203ENST00000524877 NACAP1Q9BZK3 213 aa20.57■□□□□ 0.88
BEST1-203ENST00000524877 HECW2Q9P2P5 1572 aa20.56■□□□□ 0.88
BEST1-203ENST00000524877 FAM161AQ3B820 660 aa20.56■□□□□ 0.88
BEST1-203ENST00000524877 PPP1R42Q7Z4L9 355 aa20.56■□□□□ 0.88
BEST1-203ENST00000524877 CDCA7LQ96GN5 454 aa20.56■□□□□ 0.88
BEST1-203ENST00000524877 CCDC43Q96MW1 224 aaKnown RBP20.56■□□□□ 0.88
BEST1-203ENST00000524877 GCP02774 474 aa20.55■□□□□ 0.88
BEST1-203ENST00000524877 UBE2Q2Q8WVN8 375 aa20.55■□□□□ 0.88
BEST1-203ENST00000524877 CAVIN4Q5BKX8 364 aa20.55■□□□□ 0.88
BEST1-203ENST00000524877 ADGBQ8N7X0 1667 aa20.55■□□□□ 0.88
BEST1-203ENST00000524877 SNRPA1P09661 255 aaKnown RBP20.55■□□□□ 0.88
BEST1-203ENST00000524877 DBF4Q9UBU7 674 aaPredicted RBP20.55■□□□□ 0.88
BEST1-203ENST00000524877 MCTP1Q6DN14 999 aa20.54■□□□□ 0.88
BEST1-203ENST00000524877 GCC1Q96CN9 775 aa20.54■□□□□ 0.88
BEST1-203ENST00000524877 CCDC85AQ96PX6 553 aaPredicted RBP20.54■□□□□ 0.88
BEST1-203ENST00000524877 METTL24Q5JXM2 366 aa20.54■□□□□ 0.88
BEST1-203ENST00000524877 ZSCAN29Q8IWY8 852 aaPredicted RBP20.54■□□□□ 0.88
BEST1-203ENST00000524877 FOXD4L1Q9NU39 408 aa20.54■□□□□ 0.88
BEST1-203ENST00000524877 THUMPD2Q9BTF0 503 aaKnown RBP20.54■□□□□ 0.88
BEST1-203ENST00000524877 C1orf115Q9H7X2 142 aa20.54■□□□□ 0.88
BEST1-203ENST00000524877 LRRCC1Q9C099 1032 aa20.53■□□□□ 0.88
BEST1-203ENST00000524877 USP21Q9UK80 565 aa20.53■□□□□ 0.88
BEST1-203ENST00000524877 AKAP2Q9Y2D5 859 aa20.53■□□□□ 0.88
BEST1-203ENST00000524877 RAI14Q9P0K7 980 aa20.53■□□□□ 0.88
BEST1-203ENST00000524877 FLT4P35916 1363 aa20.53■□□□□ 0.88
BEST1-203ENST00000524877 ZNF622Q969S3 477 aaKnown RBP eCLIP20.53■□□□□ 0.88
BEST1-203ENST00000524877 MTMR7Q9Y216 660 aa20.53■□□□□ 0.88
BEST1-203ENST00000524877 MLH3Q9UHC1 1453 aa20.53■□□□□ 0.88
BEST1-203ENST00000524877 ATF7IPQ6VMQ6 1270 aa20.53■□□□□ 0.88
BEST1-203ENST00000524877 ZNF219Q9P2Y4 722 aaPredicted RBP20.53■□□□□ 0.88
BEST1-203ENST00000524877 ATP6V1DQ9Y5K8 247 aa20.52■□□□□ 0.88
BEST1-203ENST00000524877 PCDH11XQ9BZA7 1347 aa20.52■□□□□ 0.88
BEST1-203ENST00000524877 PCDH11YQ9BZA8 1340 aa20.52■□□□□ 0.88
BEST1-203ENST00000524877 PSMA5P28066 241 aa20.52■□□□□ 0.88
BEST1-203ENST00000524877 PDE3AQ14432 1141 aa20.52■□□□□ 0.88
BEST1-203ENST00000524877 BRMS1Q9HCU9 246 aa20.52■□□□□ 0.88
BEST1-203ENST00000524877 SAMD9LQ8IVG5 1584 aa20.52■□□□□ 0.88
BEST1-203ENST00000524877 SRGAP3O43295 1099 aa20.52■□□□□ 0.88
BEST1-203ENST00000524877 AKAP4Q5JQC9 854 aa20.51■□□□□ 0.87
BEST1-203ENST00000524877 CDC45O75419 566 aa20.51■□□□□ 0.87
BEST1-203ENST00000524877 IFIT1P09914 478 aaKnown RBP20.51■□□□□ 0.87
BEST1-203ENST00000524877 SAFBQ15424 915 aaKnown RBP eCLIP20.51■□□□□ 0.87
BEST1-203ENST00000524877 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
BEST1-203ENST00000524877 UGGT1Q9NYU2 1555 aa20.51■□□□□ 0.87
BEST1-203ENST00000524877 WDHD1O75717 1129 aaPredicted RBP20.51■□□□□ 0.87
BEST1-203ENST00000524877 DDX46Q7L014 1031 aaKnown RBP20.51■□□□□ 0.87
BEST1-203ENST00000524877 TFCP2L1Q9NZI6 479 aa20.51■□□□□ 0.87
BEST1-203ENST00000524877 SLKQ9H2G2 1235 aaPredicted RBP20.51■□□□□ 0.87
BEST1-203ENST00000524877 XBP1P17861 261 aa20.5■□□□□ 0.87
BEST1-203ENST00000524877 STK32BQ9NY57 414 aa20.5■□□□□ 0.87
BEST1-203ENST00000524877 IFIT5Q13325 482 aaKnown RBP20.5■□□□□ 0.87
BEST1-203ENST00000524877 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
BEST1-203ENST00000524877 ORAI2Q96SN7 254 aa20.5■□□□□ 0.87
BEST1-203ENST00000524877 ANKRD18BA2A2Z9 1011 aa20.5■□□□□ 0.87
BEST1-203ENST00000524877 SETQ01105 290 aaPredicted RBP20.5■□□□□ 0.87
BEST1-203ENST00000524877 ATP2B2Q01814 1243 aa20.5■□□□□ 0.87
BEST1-203ENST00000524877 NBPF6Q5VWK0 638 aa20.49■□□□□ 0.87
BEST1-203ENST00000524877 NBPF5PQ86XG9 351 aaPredicted RBP20.49■□□□□ 0.87
BEST1-203ENST00000524877 NBPF4Q96M43 638 aa20.49■□□□□ 0.87
BEST1-203ENST00000524877 EFCAB6Q5THR3 1501 aa20.49■□□□□ 0.87
BEST1-203ENST00000524877 AACSQ86V21 672 aa20.49■□□□□ 0.87
BEST1-203ENST00000524877 ZNF771Q7L3S4 317 aaPredicted RBP20.49■□□□□ 0.87
BEST1-203ENST00000524877 LRP2BPQ9P2M1 347 aa20.49■□□□□ 0.87
BEST1-203ENST00000524877 MAGI3Q5TCQ9 1506 aa20.49■□□□□ 0.87
BEST1-203ENST00000524877 ZBTB3Q9H5J0 574 aa20.49■□□□□ 0.87
BEST1-203ENST00000524877 CCDC47Q96A33 483 aaKnown RBP20.49■□□□□ 0.87
BEST1-203ENST00000524877 FKBP4Q02790 459 aaKnown RBP eCLIP20.48■□□□□ 0.87
BEST1-203ENST00000524877 GPTP24298 496 aa20.48■□□□□ 0.87
BEST1-203ENST00000524877 ERCC6L2Q5T890 1561 aa20.48■□□□□ 0.87
BEST1-203ENST00000524877 NLRP1Q9C000 1473 aa20.48■□□□□ 0.87
BEST1-203ENST00000524877 CDC5LQ99459 802 aaKnown RBP20.48■□□□□ 0.87
BEST1-203ENST00000524877 PARP3Q9Y6F1 533 aa20.48■□□□□ 0.87
BEST1-203ENST00000524877 RRP12Q5JTH9 1297 aaKnown RBP20.47■□□□□ 0.87
BEST1-203ENST00000524877 SETDB2Q96T68 719 aa20.47■□□□□ 0.87
BEST1-203ENST00000524877 GOLGA6L3A6NEY3 463 aa20.47■□□□□ 0.87
BEST1-203ENST00000524877 IP6K1Q92551 441 aa20.47■□□□□ 0.87
BEST1-203ENST00000524877 ARHGEF12Q9NZN5 1544 aa20.47■□□□□ 0.87
BEST1-203ENST00000524877 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms