RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 SETD1AO15047 1707 aaKnown RBP14.16□□□□□ -0.14
PTPRK-217ENST00000524534 HAP1P54257 671 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-217ENST00000524534 PKP1Q13835 747 aa14.16□□□□□ -0.14
PTPRK-217ENST00000524534 ZSCAN23Q3MJ62 389 aa14.16□□□□□ -0.14
PTPRK-217ENST00000524534 RTL1A6NKG5 1358 aa14.16□□□□□ -0.14
PTPRK-217ENST00000524534 ST18O60284 1047 aa14.15□□□□□ -0.14
PTPRK-217ENST00000524534 RRS1Q15050 365 aaKnown RBP14.15□□□□□ -0.14
PTPRK-217ENST00000524534 GLIPR1L2Q4G1C9 344 aa14.15□□□□□ -0.14
PTPRK-217ENST00000524534 CASC1Q6TDU7 716 aa14.15□□□□□ -0.14
PTPRK-217ENST00000524534 COG3Q96JB2 828 aa14.15□□□□□ -0.14
PTPRK-217ENST00000524534 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
PTPRK-217ENST00000524534 HS1BP3Q53T59 392 aa14.15□□□□□ -0.14
PTPRK-217ENST00000524534 CAVIN1Q6NZI2 390 aaKnown RBP14.15□□□□□ -0.14
PTPRK-217ENST00000524534 CPS1P31327 1500 aa14.15□□□□□ -0.14
PTPRK-217ENST00000524534 AK9Q5TCS8 1911 aa14.15□□□□□ -0.14
PTPRK-217ENST00000524534 KIAA0232Q92628 1395 aa14.14□□□□□ -0.15
PTPRK-217ENST00000524534 CHL1O00533 1208 aa14.14□□□□□ -0.15
PTPRK-217ENST00000524534 PTPRCP08575 1304 aa14.14□□□□□ -0.15
PTPRK-217ENST00000524534 A2ML1A8K2U0 1454 aa14.14□□□□□ -0.15
PTPRK-217ENST00000524534 MSH6P52701 1360 aa14.14□□□□□ -0.15
PTPRK-217ENST00000524534 ZDHHC9Q9Y397 364 aa14.14□□□□□ -0.15
PTPRK-217ENST00000524534 SMARCA5O60264 1052 aaPredicted RBP14.13□□□□□ -0.15
PTPRK-217ENST00000524534 REC8O95072 547 aa14.13□□□□□ -0.15
PTPRK-217ENST00000524534 ZGPATQ8N5A5 531 aaKnown RBP14.13□□□□□ -0.15
PTPRK-217ENST00000524534 OFD1O75665 1012 aa14.13□□□□□ -0.15
PTPRK-217ENST00000524534 KRT24Q2M2I5 525 aa14.13□□□□□ -0.15
PTPRK-217ENST00000524534 PDLIM2Q96JY6 352 aa14.13□□□□□ -0.15
PTPRK-217ENST00000524534 NRKQ7Z2Y5 1582 aa14.13□□□□□ -0.15
PTPRK-217ENST00000524534 NCLP19338 710 aaKnown RBP14.12□□□□□ -0.15
PTPRK-217ENST00000524534 MON2Q7Z3U7 1717 aa14.12□□□□□ -0.15
PTPRK-217ENST00000524534 NUDT16Q96DE0 195 aaKnown RBP14.12□□□□□ -0.15
PTPRK-217ENST00000524534 MEIS3Q99687 375 aa14.12□□□□□ -0.15
PTPRK-217ENST00000524534 RBSNQ9H1K0 784 aa14.12□□□□□ -0.15
PTPRK-217ENST00000524534 ERC2O15083 957 aa14.12□□□□□ -0.15
PTPRK-217ENST00000524534 GPT2Q8TD30 523 aa14.12□□□□□ -0.15
PTPRK-217ENST00000524534 OSBPL3Q9H4L5 887 aa14.12□□□□□ -0.15
PTPRK-217ENST00000524534 KIAA1211Q6ZU35 1233 aa14.11□□□□□ -0.15
PTPRK-217ENST00000524534 C3P01024 1663 aa14.11□□□□□ -0.15
PTPRK-217ENST00000524534 PRPF40AO75400 957 aaKnown RBP14.11□□□□□ -0.15
PTPRK-217ENST00000524534 MSNP26038 577 aaKnown RBP14.11□□□□□ -0.15
PTPRK-217ENST00000524534 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
PTPRK-217ENST00000524534 AEBP1Q8IUX7 1158 aa14.11□□□□□ -0.15
PTPRK-217ENST00000524534 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
PTPRK-217ENST00000524534 EIF4A2Q14240 407 aaKnown RBP14.1□□□□□ -0.15
PTPRK-217ENST00000524534 NOL7Q9UMY1 257 aaKnown RBP14.1□□□□□ -0.15
PTPRK-217ENST00000524534 APBB1O00213 710 aa14.09□□□□□ -0.15
PTPRK-217ENST00000524534 TERF1P54274 439 aa14.09□□□□□ -0.15
PTPRK-217ENST00000524534 SULT6B1Q6IMI4 303 aa14.09□□□□□ -0.15
PTPRK-217ENST00000524534 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.09□□□□□ -0.15
PTPRK-217ENST00000524534 NCKAP5LQ9HCH0 1330 aa14.09□□□□□ -0.15
PTPRK-217ENST00000524534 HMMRO75330 724 aa14.09□□□□□ -0.15
PTPRK-217ENST00000524534 PDE1AP54750 535 aa14.09□□□□□ -0.15
PTPRK-217ENST00000524534 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
PTPRK-217ENST00000524534 RBM27Q9P2N5 1060 aaKnown RBP14.09□□□□□ -0.15
PTPRK-217ENST00000524534 AKAP12Q02952 1782 aa14.08□□□□□ -0.15
PTPRK-217ENST00000524534 MCM10Q7L590 875 aa14.08□□□□□ -0.16
PTPRK-217ENST00000524534 SIRT1Q96EB6 747 aa14.08□□□□□ -0.16
PTPRK-217ENST00000524534 PPP6R1Q9UPN7 881 aa14.08□□□□□ -0.16
PTPRK-217ENST00000524534 SPATA31D1Q6ZQQ2 1576 aa14.08□□□□□ -0.16
PTPRK-217ENST00000524534 NRXN3Q9Y4C0 1643 aa14.08□□□□□ -0.16
PTPRK-217ENST00000524534 CRB1P82279 1406 aa14.08□□□□□ -0.16
PTPRK-217ENST00000524534 METP08581 1390 aa14.08□□□□□ -0.16
PTPRK-217ENST00000524534 ZNF500O60304 480 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-217ENST00000524534 LRSAM1Q6UWE0 723 aa14.07□□□□□ -0.16
PTPRK-217ENST00000524534 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.07□□□□□ -0.16
PTPRK-217ENST00000524534 TMEM63CQ9P1W3 806 aa14.07□□□□□ -0.16
PTPRK-217ENST00000524534 SLC4A2P04920 1241 aa14.06□□□□□ -0.16
PTPRK-217ENST00000524534 TXNDC2Q86VQ3 553 aa14.06□□□□□ -0.16
PTPRK-217ENST00000524534 TMX3Q96JJ7 454 aa14.06□□□□□ -0.16
PTPRK-217ENST00000524534 SALL3Q9BXA9 1300 aa14.06□□□□□ -0.16
PTPRK-217ENST00000524534 MCM2P49736 904 aa14.06□□□□□ -0.16
PTPRK-217ENST00000524534 TECPR2O15040 1411 aa14.06□□□□□ -0.16
PTPRK-217ENST00000524534 BRD1O95696 1058 aa14.05□□□□□ -0.16
PTPRK-217ENST00000524534 CUL4AQ13619 759 aa14.05□□□□□ -0.16
PTPRK-217ENST00000524534 NSFL1CQ9UNZ2 370 aaKnown RBP14.05□□□□□ -0.16
PTPRK-217ENST00000524534 CCT4P50991 539 aaKnown RBP14.05□□□□□ -0.16
PTPRK-217ENST00000524534 NEK4P51957 841 aa14.05□□□□□ -0.16
PTPRK-217ENST00000524534 CHAMP1Q96JM3 812 aa14.05□□□□□ -0.16
PTPRK-217ENST00000524534 PDCL3Q9H2J4 239 aa14.05□□□□□ -0.16
PTPRK-217ENST00000524534 PRR36Q9H6K5 1346 aa14.04□□□□□ -0.16
PTPRK-217ENST00000524534 ITSN1Q15811 1721 aa14.04□□□□□ -0.16
PTPRK-217ENST00000524534 MBD3O95983 291 aa14.04□□□□□ -0.16
PTPRK-217ENST00000524534 ESYT1Q9BSJ8 1104 aa14.04□□□□□ -0.16
PTPRK-217ENST00000524534 AGLP35573 1532 aa14.04□□□□□ -0.16
PTPRK-217ENST00000524534 OVOS2A0A0J9YW53 1432 aa14.03□□□□□ -0.16
PTPRK-217ENST00000524534 SYCE3A1L190 88 aa14.03□□□□□ -0.16
PTPRK-217ENST00000524534 RGPD1P0DJD0 1748 aa14.03□□□□□ -0.16
PTPRK-217ENST00000524534 MCM5P33992 734 aa14.03□□□□□ -0.16
PTPRK-217ENST00000524534 OVOS2Q6IE36 1432 aa14.03□□□□□ -0.16
PTPRK-217ENST00000524534 G2E3Q7L622 706 aa14.03□□□□□ -0.16
PTPRK-217ENST00000524534 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTPRK-217ENST00000524534 IL17RAQ96F46 866 aa14.03□□□□□ -0.16
PTPRK-217ENST00000524534 ZKSCAN5Q9Y2L8 839 aa14.03□□□□□ -0.16
PTPRK-217ENST00000524534 TTC21BQ7Z4L5 1316 aa14.03□□□□□ -0.16
PTPRK-217ENST00000524534 ANAPC15P60006 121 aa14.03□□□□□ -0.16
PTPRK-217ENST00000524534 INTS4Q96HW7 963 aaKnown RBP14.03□□□□□ -0.16
PTPRK-217ENST00000524534 F6X3S4 739 aa14.02□□□□□ -0.16
PTPRK-217ENST00000524534 GNAI2P04899 355 aa14.02□□□□□ -0.16
PTPRK-217ENST00000524534 VSIG10Q8N0Z9 540 aa14.02□□□□□ -0.16
PTPRK-217ENST00000524534 TUBGCP6Q96RT7 1819 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms