RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 TERF2IPQ9NYB0 399 aa11.27□□□□□ -0.61
NSMCE2-213ENST00000523824 KAT6BQ8WYB5 2073 aa11.26□□□□□ -0.61
NSMCE2-213ENST00000523824 CARD11Q9BXL7 1154 aa11.26□□□□□ -0.61
NSMCE2-213ENST00000523824 ZCRB1Q8TBF4 217 aaKnown RBP11.25□□□□□ -0.61
NSMCE2-213ENST00000523824 CCNL1Q9UK58 526 aaPredicted RBP11.25□□□□□ -0.61
NSMCE2-213ENST00000523824 MON2Q7Z3U7 1717 aa11.25□□□□□ -0.61
NSMCE2-213ENST00000523824 ANKRD36BQ8N2N9 1353 aa11.25□□□□□ -0.61
NSMCE2-213ENST00000523824 EDC4Q6P2E9 1401 aaKnown RBP11.25□□□□□ -0.61
NSMCE2-213ENST00000523824 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
NSMCE2-213ENST00000523824 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
NSMCE2-213ENST00000523824 GOLGB1Q14789 3259 aaKnown RBP11.24□□□□□ -0.61
NSMCE2-213ENST00000523824 LTN1O94822 1766 aa11.23□□□□□ -0.61
NSMCE2-213ENST00000523824 YBX3P16989 372 aaKnown RBP eCLIP11.23□□□□□ -0.61
NSMCE2-213ENST00000523824 AMPHP49418 695 aa11.23□□□□□ -0.61
NSMCE2-213ENST00000523824 COL23A1Q86Y22 540 aaPredicted RBP11.23□□□□□ -0.61
NSMCE2-213ENST00000523824 COG3Q96JB2 828 aa11.23□□□□□ -0.61
NSMCE2-213ENST00000523824 A0A1W2PP64 1363 aa11.22□□□□□ -0.61
NSMCE2-213ENST00000523824 HOXC9P31274 260 aa11.22□□□□□ -0.61
NSMCE2-213ENST00000523824 USP54Q70EL1 1684 aa11.22□□□□□ -0.61
NSMCE2-213ENST00000523824 USP47Q96K76 1375 aa11.22□□□□□ -0.61
NSMCE2-213ENST00000523824 MAP3K19Q56UN5 1328 aa11.21□□□□□ -0.61
NSMCE2-213ENST00000523824 FBLN1P23142 703 aa11.21□□□□□ -0.61
NSMCE2-213ENST00000523824 HMGB2P26583 209 aaKnown RBP11.21□□□□□ -0.61
NSMCE2-213ENST00000523824 MSL1Q68DK7 614 aa11.21□□□□□ -0.61
NSMCE2-213ENST00000523824 PUS7Q96PZ0 661 aaKnown RBP11.21□□□□□ -0.61
NSMCE2-213ENST00000523824 QSER1Q2KHR3 1735 aa11.21□□□□□ -0.62
NSMCE2-213ENST00000523824 NSD2O96028 1365 aa11.2□□□□□ -0.62
NSMCE2-213ENST00000523824 FLAD1Q8NFF5 587 aa11.19□□□□□ -0.62
NSMCE2-213ENST00000523824 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
NSMCE2-213ENST00000523824 GPBP1L1Q9HC44 474 aaPredicted RBP11.19□□□□□ -0.62
NSMCE2-213ENST00000523824 CD2APQ9Y5K6 639 aa11.19□□□□□ -0.62
NSMCE2-213ENST00000523824 CEP350Q5VT06 3117 aa11.18□□□□□ -0.62
NSMCE2-213ENST00000523824 COL24A1Q17RW2 1714 aa11.18□□□□□ -0.62
NSMCE2-213ENST00000523824 SHANK3Q9BYB0 1731 aa11.18□□□□□ -0.62
NSMCE2-213ENST00000523824 CGNL1Q0VF96 1302 aa11.18□□□□□ -0.62
NSMCE2-213ENST00000523824 NBPF6Q5VWK0 638 aa11.18□□□□□ -0.62
NSMCE2-213ENST00000523824 USHBP1Q8N6Y0 703 aa11.18□□□□□ -0.62
NSMCE2-213ENST00000523824 NBPF4Q96M43 638 aa11.18□□□□□ -0.62
NSMCE2-213ENST00000523824 ATP10DQ9P241 1426 aa11.18□□□□□ -0.62
NSMCE2-213ENST00000523824 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
NSMCE2-213ENST00000523824 TATP17735 454 aaPredicted RBP11.17□□□□□ -0.62
NSMCE2-213ENST00000523824 RRS1Q15050 365 aaKnown RBP11.17□□□□□ -0.62
NSMCE2-213ENST00000523824 MEGF6O75095 1541 aa11.17□□□□□ -0.62
NSMCE2-213ENST00000523824 DOT1LQ8TEK3 1739 aa11.17□□□□□ -0.62
NSMCE2-213ENST00000523824 TUBGCP6Q96RT7 1819 aa11.16□□□□□ -0.62
NSMCE2-213ENST00000523824 LY75O60449 1722 aa11.16□□□□□ -0.62
NSMCE2-213ENST00000523824 MPRIPQ6WCQ1 1025 aa11.16□□□□□ -0.62
NSMCE2-213ENST00000523824 ZNF526Q8TF50 670 aaPredicted RBP11.16□□□□□ -0.62
NSMCE2-213ENST00000523824 SLC24A1O60721 1099 aa11.15□□□□□ -0.62
NSMCE2-213ENST00000523824 AK7Q96M32 723 aa11.15□□□□□ -0.62
NSMCE2-213ENST00000523824 SMG6Q86US8 1419 aaKnown RBP11.15□□□□□ -0.62
NSMCE2-213ENST00000523824 RTL1A6NKG5 1358 aa11.15□□□□□ -0.63
NSMCE2-213ENST00000523824 PCDH11XQ9BZA7 1347 aa11.14□□□□□ -0.63
NSMCE2-213ENST00000523824 PCDH11YQ9BZA8 1340 aa11.14□□□□□ -0.63
NSMCE2-213ENST00000523824 ST20-MTHFSA0A0A6YYL1 179 aa11.14□□□□□ -0.63
NSMCE2-213ENST00000523824 HSPA6P17066 643 aa11.14□□□□□ -0.63
NSMCE2-213ENST00000523824 SMARCC1Q92922 1105 aaPredicted RBP11.14□□□□□ -0.63
NSMCE2-213ENST00000523824 GGNBP2Q9H3C7 697 aa11.14□□□□□ -0.63
NSMCE2-213ENST00000523824 PALLDQ8WX93 1383 aa11.14□□□□□ -0.63
NSMCE2-213ENST00000523824 FYB1O15117 783 aa11.13□□□□□ -0.63
NSMCE2-213ENST00000523824 PHF14O94880 888 aa11.13□□□□□ -0.63
NSMCE2-213ENST00000523824 TESK2Q96S53 571 aa11.13□□□□□ -0.63
NSMCE2-213ENST00000523824 WWC3Q9ULE0 1092 aa11.13□□□□□ -0.63
NSMCE2-213ENST00000523824 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
NSMCE2-213ENST00000523824 IGSF1Q8N6C5 1336 aa11.12□□□□□ -0.63
NSMCE2-213ENST00000523824 HSP90AB2PQ58FF8 381 aa11.12□□□□□ -0.63
NSMCE2-213ENST00000523824 RGPD2P0DJD1 1756 aa11.11□□□□□ -0.63
NSMCE2-213ENST00000523824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
NSMCE2-213ENST00000523824 CYP27B1O15528 508 aa11.11□□□□□ -0.63
NSMCE2-213ENST00000523824 SMIM5Q71RC9 77 aa11.11□□□□□ -0.63
NSMCE2-213ENST00000523824 C5P01031 1676 aa11.11□□□□□ -0.63
NSMCE2-213ENST00000523824 PIGBQ92521 554 aa11.1□□□□□ -0.63
NSMCE2-213ENST00000523824 ADCY9O60503 1353 aa11.1□□□□□ -0.63
NSMCE2-213ENST00000523824 INSRP06213 1382 aa11.1□□□□□ -0.63
NSMCE2-213ENST00000523824 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
NSMCE2-213ENST00000523824 FLT4P35916 1363 aa11.09□□□□□ -0.63
NSMCE2-213ENST00000523824 SSFA2P28290 1259 aa11.09□□□□□ -0.63
NSMCE2-213ENST00000523824 TMF1P82094 1093 aa11.09□□□□□ -0.63
NSMCE2-213ENST00000523824 AMIGO3Q86WK7 504 aa11.09□□□□□ -0.63
NSMCE2-213ENST00000523824 SPG7Q9UQ90 795 aa11.09□□□□□ -0.63
NSMCE2-213ENST00000523824 LOC102724428A0A0B4J2F2 783 aa11.08□□□□□ -0.64
NSMCE2-213ENST00000523824 SIK1P57059 783 aa11.08□□□□□ -0.64
NSMCE2-213ENST00000523824 C4BP0C0L5 1744 aa11.07□□□□□ -0.64
NSMCE2-213ENST00000523824 KIF24Q5T7B8 1368 aa11.07□□□□□ -0.64
NSMCE2-213ENST00000523824 KIF3CO14782 793 aa11.07□□□□□ -0.64
NSMCE2-213ENST00000523824 GNPATO15228 680 aa11.07□□□□□ -0.64
NSMCE2-213ENST00000523824 PPM1GO15355 546 aaPredicted RBP11.07□□□□□ -0.64
NSMCE2-213ENST00000523824 ATP6V1AP38606 617 aa11.07□□□□□ -0.64
NSMCE2-213ENST00000523824 NKX1-1Q15270 411 aaPredicted RBP11.07□□□□□ -0.64
NSMCE2-213ENST00000523824 LINC00116Q8NCU8 138 aa11.07□□□□□ -0.64
NSMCE2-213ENST00000523824 TMOD3Q9NYL9 352 aa11.07□□□□□ -0.64
NSMCE2-213ENST00000523824 APLP1P51693 650 aa11.06□□□□□ -0.64
NSMCE2-213ENST00000523824 EMILIN1Q9Y6C2 1016 aa11.06□□□□□ -0.64
NSMCE2-213ENST00000523824 MMP10P09238 476 aa11.05□□□□□ -0.64
NSMCE2-213ENST00000523824 CDCA8Q53HL2 280 aa11.05□□□□□ -0.64
NSMCE2-213ENST00000523824 ASAP1Q9ULH1 1129 aa11.05□□□□□ -0.64
NSMCE2-213ENST00000523824 BCS1LQ9Y276 419 aa11.05□□□□□ -0.64
NSMCE2-213ENST00000523824 TAF1LQ8IZX4 1826 aa11.05□□□□□ -0.64
NSMCE2-213ENST00000523824 TGFB2P61812 414 aa11.04□□□□□ -0.64
NSMCE2-213ENST00000523824 ITPK1Q13572 414 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms