RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ZBED2Q9BTP6 218 aa8.25□□□□□ -1.09
PABPC1-223ENST00000523636 SPON1Q9HCB6 807 aa8.25□□□□□ -1.09
PABPC1-223ENST00000523636 GPCPD1Q9NPB8 672 aa8.25□□□□□ -1.09
PABPC1-223ENST00000523636 PPP1R1BQ9UD71 204 aaPredicted RBP8.25□□□□□ -1.09
PABPC1-223ENST00000523636 FAM198AQ9UFP1 575 aa8.25□□□□□ -1.09
PABPC1-223ENST00000523636 ZFYVE9O95405 1425 aa8.25□□□□□ -1.09
PABPC1-223ENST00000523636 PTPRUQ92729 1446 aa8.25□□□□□ -1.09
PABPC1-223ENST00000523636 SOS2Q07890 1332 aaPredicted RBP8.25□□□□□ -1.09
PABPC1-223ENST00000523636 ADAMTS13Q76LX8 1427 aa8.24□□□□□ -1.09
PABPC1-223ENST00000523636 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.24□□□□□ -1.09
PABPC1-223ENST00000523636 FAM182BQ5T319 152 aa8.24□□□□□ -1.09
PABPC1-223ENST00000523636 C14orf37Q86TY3 774 aa8.24□□□□□ -1.09
PABPC1-223ENST00000523636 DDRGK1Q96HY6 314 aa8.24□□□□□ -1.09
PABPC1-223ENST00000523636 HS3ST6Q96QI5 342 aa8.24□□□□□ -1.09
PABPC1-223ENST00000523636 EYA1Q99502 592 aa8.24□□□□□ -1.09
PABPC1-223ENST00000523636 TRPM2O94759 1503 aa8.24□□□□□ -1.09
PABPC1-223ENST00000523636 FMN1Q68DA7 1419 aa8.23□□□□□ -1.09
PABPC1-223ENST00000523636 FAM161AQ3B820 660 aa8.23□□□□□ -1.09
PABPC1-223ENST00000523636 GIGYF2Q6Y7W6 1299 aaKnown RBP8.23□□□□□ -1.09
PABPC1-223ENST00000523636 UNC5CLQ8IV45 518 aa8.23□□□□□ -1.09
PABPC1-223ENST00000523636 DNAJC5GQ8N7S2 189 aa8.23□□□□□ -1.09
PABPC1-223ENST00000523636 ARHGAP31Q2M1Z3 1444 aa8.22□□□□□ -1.09
PABPC1-223ENST00000523636 FAM205CA6NFA0 338 aa8.22□□□□□ -1.09
PABPC1-223ENST00000523636 IDI1Q13907 227 aa8.22□□□□□ -1.09
PABPC1-223ENST00000523636 POTEEQ6S8J3 1075 aa8.22□□□□□ -1.09
PABPC1-223ENST00000523636 NALCNQ8IZF0 1738 aa8.22□□□□□ -1.09
PABPC1-223ENST00000523636 PLEKHG1Q9ULL1 1385 aa8.22□□□□□ -1.09
PABPC1-223ENST00000523636 TNRC18O15417 2968 aaPredicted RBP8.21□□□□□ -1.09
PABPC1-223ENST00000523636 PSEN2P49810 448 aa8.21□□□□□ -1.1
PABPC1-223ENST00000523636 MDM2Q00987 491 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-223ENST00000523636 NUDT18Q6ZVK8 323 aa8.21□□□□□ -1.1
PABPC1-223ENST00000523636 TATDN2Q93075 761 aa8.21□□□□□ -1.1
PABPC1-223ENST00000523636 PDGFDQ9GZP0 370 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-223ENST00000523636 RABGEF1Q9UJ41 708 aa8.21□□□□□ -1.1
PABPC1-223ENST00000523636 TMEM131LA2VDJ0 1609 aa8.21□□□□□ -1.1
PABPC1-223ENST00000523636 XRN1Q8IZH2 1706 aaKnown RBP8.2□□□□□ -1.1
PABPC1-223ENST00000523636 PROX2Q3B8N5 592 aa8.2□□□□□ -1.1
PABPC1-223ENST00000523636 TNS4Q8IZW8 715 aa8.2□□□□□ -1.1
PABPC1-223ENST00000523636 REPIN1Q9BWE0 567 aaKnown RBP8.2□□□□□ -1.1
PABPC1-223ENST00000523636 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
PABPC1-223ENST00000523636 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
PABPC1-223ENST00000523636 CFDP1Q9UEE9 299 aaPredicted RBP8.2□□□□□ -1.1
PABPC1-223ENST00000523636 PLCH1Q4KWH8 1693 aa8.2□□□□□ -1.1
PABPC1-223ENST00000523636 C1orf167Q5SNV9 1468 aa8.19□□□□□ -1.1
PABPC1-223ENST00000523636 RCCD1A6NED2 376 aa8.19□□□□□ -1.1
PABPC1-223ENST00000523636 DNAJB2P25686 324 aa8.19□□□□□ -1.1
PABPC1-223ENST00000523636 SYT17Q9BSW7 474 aa8.19□□□□□ -1.1
PABPC1-223ENST00000523636 FAM117AQ9C073 453 aa8.19□□□□□ -1.1
PABPC1-223ENST00000523636 FAM217BQ9NTX9 383 aaPredicted RBP8.19□□□□□ -1.1
PABPC1-223ENST00000523636 PNMA3Q9UL41 463 aa8.19□□□□□ -1.1
PABPC1-223ENST00000523636 TBX22Q9Y458 520 aa8.19□□□□□ -1.1
PABPC1-223ENST00000523636 EIF2AK4Q9P2K8 1649 aaKnown RBP8.18□□□□□ -1.1
PABPC1-223ENST00000523636 TK2O00142 265 aa8.18□□□□□ -1.1
PABPC1-223ENST00000523636 DMRTA1Q5VZB9 504 aa8.18□□□□□ -1.1
PABPC1-223ENST00000523636 NPM2Q86SE8 214 aaKnown RBP8.18□□□□□ -1.1
PABPC1-223ENST00000523636 IL27Q8NEV9 243 aa8.18□□□□□ -1.1
PABPC1-223ENST00000523636 KIAA1468Q9P260 1216 aa8.18□□□□□ -1.1
PABPC1-223ENST00000523636 ADGRL3Q9HAR2 1447 aa8.18□□□□□ -1.1
PABPC1-223ENST00000523636 NWD2Q9ULI1 1742 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 PPP1R15AO75807 674 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-223ENST00000523636 MS4A1P11836 297 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 SSTR3P32745 418 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-223ENST00000523636 VPS72Q15906 364 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 VPS9D1Q9Y2B5 631 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 AXIN2Q9Y2T1 843 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 NOS1P29475 1434 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 PXDNQ92626 1479 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 EHBP1L1Q8N3D4 1523 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 ADGRB2O60241 1585 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 USP32Q8NFA0 1604 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 PTPN23Q9H3S7 1636 aa8.17□□□□□ -1.1
PABPC1-223ENST00000523636 PLEKHG3A1L390 1219 aa8.16□□□□□ -1.1
PABPC1-223ENST00000523636 C3orf80F5H4A9 247 aa8.16□□□□□ -1.1
PABPC1-223ENST00000523636 CROCC2H7BZ55 1655 aa8.16□□□□□ -1.1
PABPC1-223ENST00000523636 CCDC141Q6ZP82 1450 aa8.16□□□□□ -1.1
PABPC1-223ENST00000523636 NRAPQ86VF7 1730 aa8.16□□□□□ -1.1
PABPC1-223ENST00000523636 ORAI2Q96SN7 254 aa8.16□□□□□ -1.1
PABPC1-223ENST00000523636 FHDC1Q9C0D6 1143 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-223ENST00000523636 TMEM134Q9H6X4 195 aa8.16□□□□□ -1.1
PABPC1-223ENST00000523636 GOPCQ9HD26 462 aa8.16□□□□□ -1.1
PABPC1-223ENST00000523636 PLSCR2Q9NRY7 297 aa8.16□□□□□ -1.1
PABPC1-223ENST00000523636 THSD7AQ9UPZ6 1657 aa8.16□□□□□ -1.1
PABPC1-223ENST00000523636 CCDC18Q5T9S5 1454 aa8.15□□□□□ -1.1
PABPC1-223ENST00000523636 PARD3Q8TEW0 1356 aa8.15□□□□□ -1.1
PABPC1-223ENST00000523636 PIK3R4Q99570 1358 aa8.15□□□□□ -1.1
PABPC1-223ENST00000523636 LAPTM4BQ86VI4 370 aa8.15□□□□□ -1.1
PABPC1-223ENST00000523636 SULF1Q8IWU6 871 aa8.15□□□□□ -1.1
PABPC1-223ENST00000523636 DLC1Q96QB1 1528 aa8.14□□□□□ -1.11
PABPC1-223ENST00000523636 TNS2Q63HR2 1409 aa8.14□□□□□ -1.11
PABPC1-223ENST00000523636 MTUS2Q5JR59 1369 aa8.14□□□□□ -1.11
PABPC1-223ENST00000523636 NLRP7Q8WX94 980 aa8.14□□□□□ -1.11
PABPC1-223ENST00000523636 NBPF3Q9H094 633 aa8.14□□□□□ -1.11
PABPC1-223ENST00000523636 AMOTL2Q9Y2J4 779 aa8.14□□□□□ -1.11
PABPC1-223ENST00000523636 GCC2Q8IWJ2 1684 aa8.14□□□□□ -1.11
PABPC1-223ENST00000523636 NRXN3Q9Y4C0 1643 aa8.14□□□□□ -1.11
PABPC1-223ENST00000523636 RIMS2Q9UQ26 1411 aa8.13□□□□□ -1.11
PABPC1-223ENST00000523636 BHMG1C9JSJ3 638 aaPredicted RBP8.13□□□□□ -1.11
PABPC1-223ENST00000523636 LSM11P83369 360 aaKnown RBP eCLIP8.13□□□□□ -1.11
PABPC1-223ENST00000523636 FAM98CQ17RN3 349 aaKnown RBP8.13□□□□□ -1.11
PABPC1-223ENST00000523636 SPNS2Q8IVW8 549 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms