RNA–Protein interactions for RNA: ENST00000518098.1

LINCR-0001-202, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-202ENST00000518098 RBM46Q8TBY0 533 aaKnown RBP8.51□□□□□ -1.05
LINCR-0001-202ENST00000518098 IP6K1Q92551 441 aa8.51□□□□□ -1.05
LINCR-0001-202ENST00000518098 TERF2IPQ9NYB0 399 aa8.51□□□□□ -1.05
LINCR-0001-202ENST00000518098 PRELPP51888 382 aa8.5□□□□□ -1.05
LINCR-0001-202ENST00000518098 TGFB2P61812 414 aa8.5□□□□□ -1.05
LINCR-0001-202ENST00000518098 COL24A1Q17RW2 1714 aa8.5□□□□□ -1.05
LINCR-0001-202ENST00000518098 COL23A1Q86Y22 540 aaPredicted RBP8.5□□□□□ -1.05
LINCR-0001-202ENST00000518098 DNAJC5GQ8N7S2 189 aa8.5□□□□□ -1.05
LINCR-0001-202ENST00000518098 JMYQ8N9B5 988 aa8.5□□□□□ -1.05
LINCR-0001-202ENST00000518098 WNK3Q9BYP7 1800 aa8.5□□□□□ -1.05
LINCR-0001-202ENST00000518098 NFAT5O94916 1531 aa8.49□□□□□ -1.05
LINCR-0001-202ENST00000518098 KIF3CO14782 793 aa8.49□□□□□ -1.05
LINCR-0001-202ENST00000518098 SSFA2P28290 1259 aa8.49□□□□□ -1.05
LINCR-0001-202ENST00000518098 MAPK8IP2Q13387 824 aaPredicted RBP8.49□□□□□ -1.05
LINCR-0001-202ENST00000518098 NBPF1Q3BBV0 1214 aa8.49□□□□□ -1.05
LINCR-0001-202ENST00000518098 AK7Q96M32 723 aa8.49□□□□□ -1.05
LINCR-0001-202ENST00000518098 KDM2BQ8NHM5 1336 aa8.49□□□□□ -1.05
LINCR-0001-202ENST00000518098 PLEKHG2Q9H7P9 1386 aa8.48□□□□□ -1.05
LINCR-0001-202ENST00000518098 SBNO2Q9Y2G9 1366 aa8.48□□□□□ -1.05
LINCR-0001-202ENST00000518098 TNS4Q8IZW8 715 aa8.48□□□□□ -1.05
LINCR-0001-202ENST00000518098 ZNF526Q8TF50 670 aaPredicted RBP8.48□□□□□ -1.05
LINCR-0001-202ENST00000518098 RAPGEF4Q8WZA2 1011 aa8.48□□□□□ -1.05
LINCR-0001-202ENST00000518098 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
LINCR-0001-202ENST00000518098 IGSF1Q8N6C5 1336 aa8.48□□□□□ -1.05
LINCR-0001-202ENST00000518098 NSD2O96028 1365 aa8.48□□□□□ -1.05
LINCR-0001-202ENST00000518098 PIK3C2AO00443 1686 aa8.47□□□□□ -1.05
LINCR-0001-202ENST00000518098 NLGN1Q8N2Q7 840 aa8.47□□□□□ -1.05
LINCR-0001-202ENST00000518098 EDC4Q6P2E9 1401 aaKnown RBP8.46□□□□□ -1.05
LINCR-0001-202ENST00000518098 SMG6Q86US8 1419 aaKnown RBP8.46□□□□□ -1.05
LINCR-0001-202ENST00000518098 BTAF1O14981 1849 aa8.46□□□□□ -1.06
LINCR-0001-202ENST00000518098 COG3Q96JB2 828 aa8.46□□□□□ -1.06
LINCR-0001-202ENST00000518098 PCDH11XQ9BZA7 1347 aa8.46□□□□□ -1.06
LINCR-0001-202ENST00000518098 PCDH11YQ9BZA8 1340 aa8.46□□□□□ -1.06
LINCR-0001-202ENST00000518098 ZC3H4Q9UPT8 1303 aaKnown RBP8.46□□□□□ -1.06
LINCR-0001-202ENST00000518098 RTL1A6NKG5 1358 aa8.46□□□□□ -1.06
LINCR-0001-202ENST00000518098 TATP17735 454 aaPredicted RBP8.45□□□□□ -1.06
LINCR-0001-202ENST00000518098 AMPHP49418 695 aa8.45□□□□□ -1.06
LINCR-0001-202ENST00000518098 PPP4R3CPQ6ZMV5 832 aa8.45□□□□□ -1.06
LINCR-0001-202ENST00000518098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.45□□□□□ -1.06
LINCR-0001-202ENST00000518098 KIF24Q5T7B8 1368 aa8.45□□□□□ -1.06
LINCR-0001-202ENST00000518098 SMC1BQ8NDV3 1235 aa8.44□□□□□ -1.06
LINCR-0001-202ENST00000518098 PCDH10Q9P2E7 1040 aa8.44□□□□□ -1.06
LINCR-0001-202ENST00000518098 ROCK2O75116 1388 aaKnown RBP8.44□□□□□ -1.06
LINCR-0001-202ENST00000518098 C10orf71Q711Q0 1435 aa8.44□□□□□ -1.06
LINCR-0001-202ENST00000518098 FAM208AQ9UK61 1670 aaKnown RBP8.43□□□□□ -1.06
LINCR-0001-202ENST00000518098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.43□□□□□ -1.06
LINCR-0001-202ENST00000518098 MSL1Q68DK7 614 aa8.43□□□□□ -1.06
LINCR-0001-202ENST00000518098 TMC1Q8TDI8 760 aa8.43□□□□□ -1.06
LINCR-0001-202ENST00000518098 CCDC87Q9NVE4 849 aa8.43□□□□□ -1.06
LINCR-0001-202ENST00000518098 PALLDQ8WX93 1383 aa8.43□□□□□ -1.06
LINCR-0001-202ENST00000518098 HOXC9P31274 260 aa8.42□□□□□ -1.06
LINCR-0001-202ENST00000518098 ARHGAP27Q6ZUM4 889 aa8.42□□□□□ -1.06
LINCR-0001-202ENST00000518098 NME9Q86XW9 330 aa8.42□□□□□ -1.06
LINCR-0001-202ENST00000518098 MAP3K19Q56UN5 1328 aa8.42□□□□□ -1.06
LINCR-0001-202ENST00000518098 USP54Q70EL1 1684 aa8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 CICQ96RK0 1608 aaPredicted RBP8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 CD163L1Q9NR16 1453 aa8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 TMF1P82094 1093 aa8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 COL13A1Q5TAT6 717 aaPredicted RBP8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 MPRIPQ6WCQ1 1025 aa8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 WWC3Q9ULE0 1092 aa8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 SPG7Q9UQ90 795 aa8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 BCS1LQ9Y276 419 aa8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 KAT6BQ8WYB5 2073 aa8.41□□□□□ -1.06
LINCR-0001-202ENST00000518098 FCHSD2O94868 740 aa8.4□□□□□ -1.06
LINCR-0001-202ENST00000518098 KCNQ4P56696 695 aa8.4□□□□□ -1.06
LINCR-0001-202ENST00000518098 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.06
LINCR-0001-202ENST00000518098 LTV1Q96GA3 475 aaPredicted RBP8.4□□□□□ -1.06
LINCR-0001-202ENST00000518098 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
LINCR-0001-202ENST00000518098 RTCBQ9Y3I0 505 aaKnown RBP8.4□□□□□ -1.06
LINCR-0001-202ENST00000518098 PARP3Q9Y6F1 533 aa8.4□□□□□ -1.06
LINCR-0001-202ENST00000518098 LY75O60449 1722 aa8.4□□□□□ -1.07
LINCR-0001-202ENST00000518098 LOC102724428A0A0B4J2F2 783 aa8.39□□□□□ -1.07
LINCR-0001-202ENST00000518098 MMP10P09238 476 aa8.39□□□□□ -1.07
LINCR-0001-202ENST00000518098 SIK1P57059 783 aa8.39□□□□□ -1.07
LINCR-0001-202ENST00000518098 NKX1-1Q15270 411 aaPredicted RBP8.39□□□□□ -1.07
LINCR-0001-202ENST00000518098 PHF14O94880 888 aa8.38□□□□□ -1.07
LINCR-0001-202ENST00000518098 VEGFAP15692 232 aaPredicted RBP8.38□□□□□ -1.07
LINCR-0001-202ENST00000518098 DALRD3Q5D0E6 543 aaKnown RBP8.38□□□□□ -1.07
LINCR-0001-202ENST00000518098 RC3H1Q5TC82 1133 aaKnown RBP8.38□□□□□ -1.07
LINCR-0001-202ENST00000518098 C9orf131Q5VYM1 1079 aa8.38□□□□□ -1.07
LINCR-0001-202ENST00000518098 L3MBTL2Q969R5 705 aa8.38□□□□□ -1.07
LINCR-0001-202ENST00000518098 TMOD3Q9NYL9 352 aa8.38□□□□□ -1.07
LINCR-0001-202ENST00000518098 GNPATO15228 680 aa8.37□□□□□ -1.07
LINCR-0001-202ENST00000518098 CAPN15O75808 1086 aa8.37□□□□□ -1.07
LINCR-0001-202ENST00000518098 SLC34A2O95436 690 aa8.37□□□□□ -1.07
LINCR-0001-202ENST00000518098 HSP90AB1P08238 724 aaKnown RBP8.37□□□□□ -1.07
LINCR-0001-202ENST00000518098 RFC4P35249 363 aa8.37□□□□□ -1.07
LINCR-0001-202ENST00000518098 NBPF6Q5VWK0 638 aa8.37□□□□□ -1.07
LINCR-0001-202ENST00000518098 NBPF4Q96M43 638 aa8.37□□□□□ -1.07
LINCR-0001-202ENST00000518098 CARD11Q9BXL7 1154 aa8.37□□□□□ -1.07
LINCR-0001-202ENST00000518098 NMRK2Q9NPI5 230 aa8.37□□□□□ -1.07
LINCR-0001-202ENST00000518098 INSRP06213 1382 aa8.36□□□□□ -1.07
LINCR-0001-202ENST00000518098 ATP6V1AP38606 617 aa8.36□□□□□ -1.07
LINCR-0001-202ENST00000518098 CDCA8Q53HL2 280 aa8.36□□□□□ -1.07
LINCR-0001-202ENST00000518098 DPY19L2Q6NUT2 758 aa8.36□□□□□ -1.07
LINCR-0001-202ENST00000518098 SLC12A5Q9H2X9 1139 aa8.36□□□□□ -1.07
LINCR-0001-202ENST00000518098 PRDM10Q9NQV6 1147 aa8.36□□□□□ -1.07
LINCR-0001-202ENST00000518098 PDZRN3Q9UPQ7 1066 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms