RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 ARHGEF28Q8N1W1 1705 aaKnown RBP8.05□□□□□ -1.12
SCARNA6.1-201ENST00000516989 NPHP3Q7Z494 1330 aa8.04□□□□□ -1.12
SCARNA6.1-201ENST00000516989 NALCNQ8IZF0 1738 aa8.04□□□□□ -1.12
SCARNA6.1-201ENST00000516989 MAP3K7O43318 606 aa8.04□□□□□ -1.12
SCARNA6.1-201ENST00000516989 PHF14O94880 888 aa8.04□□□□□ -1.12
SCARNA6.1-201ENST00000516989 EN1Q05925 392 aaPredicted RBP8.04□□□□□ -1.12
SCARNA6.1-201ENST00000516989 LRRC59Q96AG4 307 aaKnown RBP8.04□□□□□ -1.12
SCARNA6.1-201ENST00000516989 SLC12A5Q9H2X9 1139 aa8.04□□□□□ -1.12
SCARNA6.1-201ENST00000516989 ACEP12821 1306 aa8.03□□□□□ -1.12
SCARNA6.1-201ENST00000516989 CDC42BPGQ6DT37 1551 aa8.03□□□□□ -1.12
SCARNA6.1-201ENST00000516989 SBNO2Q9Y2G9 1366 aa8.03□□□□□ -1.12
SCARNA6.1-201ENST00000516989 POTEFA5A3E0 1075 aa8.03□□□□□ -1.12
SCARNA6.1-201ENST00000516989 C3orf67Q6ZVT6 689 aa8.03□□□□□ -1.12
SCARNA6.1-201ENST00000516989 SLC39A7Q92504 469 aa8.03□□□□□ -1.12
SCARNA6.1-201ENST00000516989 PUS7Q96PZ0 661 aaKnown RBP8.03□□□□□ -1.12
SCARNA6.1-201ENST00000516989 ANKARQ7Z5J8 1434 aa8.03□□□□□ -1.12
SCARNA6.1-201ENST00000516989 ATAD2Q6PL18 1390 aa8.02□□□□□ -1.13
SCARNA6.1-201ENST00000516989 C7P10643 843 aa8.02□□□□□ -1.13
SCARNA6.1-201ENST00000516989 CLCN1P35523 988 aa8.02□□□□□ -1.13
SCARNA6.1-201ENST00000516989 TMUB1Q9BVT8 246 aa8.02□□□□□ -1.13
SCARNA6.1-201ENST00000516989 PPIP5K1Q6PFW1 1433 aa8.02□□□□□ -1.13
SCARNA6.1-201ENST00000516989 SOS2Q07890 1332 aaPredicted RBP8.02□□□□□ -1.13
SCARNA6.1-201ENST00000516989 ROBO1Q9Y6N7 1651 aa8.02□□□□□ -1.13
SCARNA6.1-201ENST00000516989 NUTM2BA6NNL0 878 aaPredicted RBP8.01□□□□□ -1.13
SCARNA6.1-201ENST00000516989 NUTM2EB1AL46 878 aaPredicted RBP8.01□□□□□ -1.13
SCARNA6.1-201ENST00000516989 C11orf95C9JLR9 678 aaPredicted RBP8.01□□□□□ -1.13
SCARNA6.1-201ENST00000516989 MDM2Q00987 491 aaPredicted RBP8.01□□□□□ -1.13
SCARNA6.1-201ENST00000516989 HDGFL2Q7Z4V5 671 aaPredicted RBP8.01□□□□□ -1.13
SCARNA6.1-201ENST00000516989 NUTM2AQ8IVF1 878 aaPredicted RBP8.01□□□□□ -1.13
SCARNA6.1-201ENST00000516989 ARID3AQ99856 593 aa8.01□□□□□ -1.13
SCARNA6.1-201ENST00000516989 PCDHGA10Q9Y5H3 936 aa8.01□□□□□ -1.13
SCARNA6.1-201ENST00000516989 TULP4Q9NRJ4 1543 aa8.01□□□□□ -1.13
SCARNA6.1-201ENST00000516989 QRICH2Q9H0J4 1663 aa8.01□□□□□ -1.13
SCARNA6.1-201ENST00000516989 ONECUT3O60422 494 aaPredicted RBP8□□□□□ -1.13
SCARNA6.1-201ENST00000516989 NUTM2GQ5VZR2 741 aa8□□□□□ -1.13
SCARNA6.1-201ENST00000516989 SLAIN1Q8ND83 568 aa8□□□□□ -1.13
SCARNA6.1-201ENST00000516989 PHOX2BQ99453 314 aa8□□□□□ -1.13
SCARNA6.1-201ENST00000516989 C1orf115Q9H7X2 142 aa8□□□□□ -1.13
SCARNA6.1-201ENST00000516989 GPCPD1Q9NPB8 672 aa8□□□□□ -1.13
SCARNA6.1-201ENST00000516989 TERF2IPQ9NYB0 399 aa8□□□□□ -1.13
SCARNA6.1-201ENST00000516989 ADGRB2O60241 1585 aa8□□□□□ -1.13
SCARNA6.1-201ENST00000516989 FMN2Q9NZ56 1722 aa8□□□□□ -1.13
SCARNA6.1-201ENST00000516989 ATP7BP35670 1465 aa8□□□□□ -1.13
SCARNA6.1-201ENST00000516989 SSTR3P32745 418 aaPredicted RBP7.99□□□□□ -1.13
SCARNA6.1-201ENST00000516989 TSR1Q2NL82 804 aaKnown RBP7.99□□□□□ -1.13
SCARNA6.1-201ENST00000516989 SH3D19Q5HYK7 790 aa7.99□□□□□ -1.13
SCARNA6.1-201ENST00000516989 TYW1BQ6NUM6 668 aa7.99□□□□□ -1.13
SCARNA6.1-201ENST00000516989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCARNA6.1-201ENST00000516989 ABTB2Q8N961 1025 aa7.99□□□□□ -1.13
SCARNA6.1-201ENST00000516989 RGPD8O14715 1765 aaPredicted RBP7.99□□□□□ -1.13
SCARNA6.1-201ENST00000516989 SPATA31A3Q5VYP0 1347 aa7.99□□□□□ -1.13
SCARNA6.1-201ENST00000516989 JCADQ9P266 1359 aa7.98□□□□□ -1.13
SCARNA6.1-201ENST00000516989 APBB1O00213 710 aa7.98□□□□□ -1.13
SCARNA6.1-201ENST00000516989 CABLES1Q8TDN4 633 aa7.98□□□□□ -1.13
SCARNA6.1-201ENST00000516989 KTN1Q86UP2 1357 aaKnown RBP7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 USP32Q8NFA0 1604 aa7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 ADAMTS2O95450 1211 aa7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 SKIV2LQ15477 1246 aaKnown RBP7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 MEX3CQ5U5Q3 659 aaKnown RBP7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 PANK3Q9H999 370 aa7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 METRNQ9UJH8 293 aa7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 PCDHGA4Q9Y5G9 962 aa7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 KIF7Q2M1P5 1343 aa7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 TTC21BQ7Z4L5 1316 aa7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 SBNO1A3KN83 1393 aa7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 POLR3AO14802 1390 aaPredicted RBP7.97□□□□□ -1.13
SCARNA6.1-201ENST00000516989 PHLPP1O60346 1717 aa7.96□□□□□ -1.14
SCARNA6.1-201ENST00000516989 FAM161AQ3B820 660 aa7.96□□□□□ -1.14
SCARNA6.1-201ENST00000516989 NLRP13Q86W25 1043 aa7.96□□□□□ -1.14
SCARNA6.1-201ENST00000516989 BEGAINQ9BUH8 593 aa7.96□□□□□ -1.14
SCARNA6.1-201ENST00000516989 SPATA31A6Q5VVP1 1343 aa7.96□□□□□ -1.14
SCARNA6.1-201ENST00000516989 AHDC1Q5TGY3 1603 aaPredicted RBP7.96□□□□□ -1.14
SCARNA6.1-201ENST00000516989 NINLQ9Y2I6 1382 aa7.96□□□□□ -1.14
SCARNA6.1-201ENST00000516989 A6NJR5 290 aa7.95□□□□□ -1.14
SCARNA6.1-201ENST00000516989 OATP04181 439 aa7.95□□□□□ -1.14
SCARNA6.1-201ENST00000516989 FBXW7Q969H0 707 aa7.95□□□□□ -1.14
SCARNA6.1-201ENST00000516989 CLUAP1Q96AJ1 413 aa7.95□□□□□ -1.14
SCARNA6.1-201ENST00000516989 CARD14Q9BXL6 1004 aa7.95□□□□□ -1.14
SCARNA6.1-201ENST00000516989 KIF1AQ12756 1690 aa7.95□□□□□ -1.14
SCARNA6.1-201ENST00000516989 ARHGEF10O15013 1369 aa7.95□□□□□ -1.14
SCARNA6.1-201ENST00000516989 PNPLA6Q8IY17 1366 aa7.95□□□□□ -1.14
SCARNA6.1-201ENST00000516989 PXDNQ92626 1479 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 ZBTB7CA1YPR0 619 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 NME9Q86XW9 330 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 NGLY1Q96IV0 654 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 WASHC2AQ641Q2 1341 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 TTC21AQ8NDW8 1320 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 A0A1W2PP64 1363 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 BRD4O60885 1362 aaPredicted RBP7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 ANKRD36BQ8N2N9 1353 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 CCDC7Q96M83 1385 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 USP6P35125 1406 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 CPSF1Q10570 1443 aaKnown RBP7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 TNS3Q68CZ2 1445 aa7.94□□□□□ -1.14
SCARNA6.1-201ENST00000516989 COL16A1Q07092 1604 aaPredicted RBP7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 NHSL1Q5SYE7 1610 aa7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 ZC3H6P61129 1189 aaKnown RBP7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 CNGB1Q14028 1251 aaPredicted RBP7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 C6orf132Q5T0Z8 1188 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms