RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 FMN2Q9NZ56 1722 aa21.82■■□□□ 1.08
SNX2-213ENST00000514949 PLEKHM2Q8IWE5 1019 aa21.82■■□□□ 1.08
SNX2-213ENST00000514949 SBNO1A3KN83 1393 aa21.82■■□□□ 1.08
SNX2-213ENST00000514949 CDC45O75419 566 aa21.81■■□□□ 1.08
SNX2-213ENST00000514949 MCM10Q7L590 875 aa21.8■■□□□ 1.08
SNX2-213ENST00000514949 EID1Q9Y6B2 187 aa21.8■■□□□ 1.08
SNX2-213ENST00000514949 FLT4P35916 1363 aa21.8■■□□□ 1.08
SNX2-213ENST00000514949 SPRYD3Q8NCJ5 442 aa21.8■■□□□ 1.08
SNX2-213ENST00000514949 MAP3K19Q56UN5 1328 aa21.8■■□□□ 1.08
SNX2-213ENST00000514949 L1TD1Q5T7N2 865 aaKnown RBP21.79■■□□□ 1.08
SNX2-213ENST00000514949 RIMS1Q86UR5 1692 aaKnown RBP21.79■■□□□ 1.08
SNX2-213ENST00000514949 DIP2AQ14689 1571 aa21.79■■□□□ 1.08
SNX2-213ENST00000514949 RTL1A6NKG5 1358 aa21.79■■□□□ 1.08
SNX2-213ENST00000514949 KRT24Q2M2I5 525 aa21.79■■□□□ 1.08
SNX2-213ENST00000514949 GSPT1P15170 499 aaKnown RBP21.78■■□□□ 1.08
SNX2-213ENST00000514949 CEP85Q6P2H3 762 aa21.78■■□□□ 1.08
SNX2-213ENST00000514949 AMOTL2Q9Y2J4 779 aa21.77■■□□□ 1.08
SNX2-213ENST00000514949 TTC22Q5TAA0 569 aa21.77■■□□□ 1.08
SNX2-213ENST00000514949 DDX11L8A8MPP1 907 aa21.76■■□□□ 1.07
SNX2-213ENST00000514949 IGSF1Q8N6C5 1336 aa21.76■■□□□ 1.07
SNX2-213ENST00000514949 SLC26A8Q96RN1 970 aa21.76■■□□□ 1.07
SNX2-213ENST00000514949 FSD2A1L4K1 749 aa21.75■■□□□ 1.07
SNX2-213ENST00000514949 HTATSF1O43719 755 aaKnown RBP21.75■■□□□ 1.07
SNX2-213ENST00000514949 MSH6P52701 1360 aa21.75■■□□□ 1.07
SNX2-213ENST00000514949 MTHFSDQ2M296 383 aaKnown RBP21.74■■□□□ 1.07
SNX2-213ENST00000514949 USP54Q70EL1 1684 aa21.74■■□□□ 1.07
SNX2-213ENST00000514949 NUTM2FA1L443 756 aa21.73■■□□□ 1.07
SNX2-213ENST00000514949 GAS2L2Q8NHY3 880 aa21.73■■□□□ 1.07
SNX2-213ENST00000514949 ANKARQ7Z5J8 1434 aa21.73■■□□□ 1.07
SNX2-213ENST00000514949 PIK3C2AO00443 1686 aa21.73■■□□□ 1.07
SNX2-213ENST00000514949 K7ELQ4 463 aaPredicted RBP21.73■■□□□ 1.07
SNX2-213ENST00000514949 TRAK2O60296 914 aa21.73■■□□□ 1.07
SNX2-213ENST00000514949 XRN1Q8IZH2 1706 aaKnown RBP21.73■■□□□ 1.07
SNX2-213ENST00000514949 LRRC37A3O60309 1634 aa21.72■■□□□ 1.07
SNX2-213ENST00000514949 SLC4A2P04920 1241 aa21.72■■□□□ 1.07
SNX2-213ENST00000514949 HSP90AB1P08238 724 aaKnown RBP21.72■■□□□ 1.07
SNX2-213ENST00000514949 RAB3GAP1Q15042 981 aa21.72■■□□□ 1.07
SNX2-213ENST00000514949 RTF1Q92541 710 aaKnown RBP21.71■■□□□ 1.07
SNX2-213ENST00000514949 CCT4P50991 539 aaKnown RBP21.71■■□□□ 1.07
SNX2-213ENST00000514949 EYA1Q99502 592 aa21.71■■□□□ 1.07
SNX2-213ENST00000514949 MEIS3Q99687 375 aa21.71■■□□□ 1.07
SNX2-213ENST00000514949 RGPD8O14715 1765 aaPredicted RBP21.7■■□□□ 1.07
SNX2-213ENST00000514949 SOS1Q07889 1333 aaPredicted RBP21.7■■□□□ 1.06
SNX2-213ENST00000514949 CEP170BQ9Y4F5 1589 aaPredicted RBP21.7■■□□□ 1.06
SNX2-213ENST00000514949 CD2BP2O95400 341 aaKnown RBP21.7■■□□□ 1.06
SNX2-213ENST00000514949 TSPYL4Q9UJ04 414 aa21.7■■□□□ 1.06
SNX2-213ENST00000514949 FOXO3O43524 673 aa21.69■■□□□ 1.06
SNX2-213ENST00000514949 HMMRO75330 724 aa21.68■■□□□ 1.06
SNX2-213ENST00000514949 CEBPAP49715 358 aaPredicted RBP21.68■■□□□ 1.06
SNX2-213ENST00000514949 C16orf71Q8IYS4 520 aaPredicted RBP21.68■■□□□ 1.06
SNX2-213ENST00000514949 NGDNQ8NEJ9 315 aaKnown RBP21.68■■□□□ 1.06
SNX2-213ENST00000514949 TNPO1Q92973 898 aaKnown RBP21.68■■□□□ 1.06
SNX2-213ENST00000514949 RTN4Q9NQC3 1192 aaKnown RBP21.68■■□□□ 1.06
SNX2-213ENST00000514949 RABEP1Q15276 862 aa21.68■■□□□ 1.06
SNX2-213ENST00000514949 THEMISQ8N1K5 641 aaPredicted RBP21.68■■□□□ 1.06
SNX2-213ENST00000514949 OSBPL3Q9H4L5 887 aa21.68■■□□□ 1.06
SNX2-213ENST00000514949 BABAM1Q9NWV8 329 aa21.68■■□□□ 1.06
SNX2-213ENST00000514949 ISY1Q9ULR0 285 aaKnown RBP21.68■■□□□ 1.06
SNX2-213ENST00000514949 PTMSP20962 102 aa21.67■■□□□ 1.06
SNX2-213ENST00000514949 CLEC17AQ6ZS10 378 aa21.67■■□□□ 1.06
SNX2-213ENST00000514949 FAM43AQ8N2R8 423 aa21.67■■□□□ 1.06
SNX2-213ENST00000514949 USP26Q9BXU7 913 aa21.67■■□□□ 1.06
SNX2-213ENST00000514949 CACNA1FO60840 1977 aa21.67■■□□□ 1.06
SNX2-213ENST00000514949 MARF1Q9Y4F3 1742 aaKnown RBP21.67■■□□□ 1.06
SNX2-213ENST00000514949 GOLGA6L3A6NEY3 463 aa21.67■■□□□ 1.06
SNX2-213ENST00000514949 AMPHP49418 695 aa21.67■■□□□ 1.06
SNX2-213ENST00000514949 GBP4Q96PP9 640 aa21.67■■□□□ 1.06
SNX2-213ENST00000514949 NWD1Q149M9 1564 aa21.66■■□□□ 1.06
SNX2-213ENST00000514949 MIS18AQ9NYP9 233 aa21.65■■□□□ 1.06
SNX2-213ENST00000514949 SDSP20132 328 aa21.65■■□□□ 1.06
SNX2-213ENST00000514949 G2E3Q7L622 706 aa21.65■■□□□ 1.06
SNX2-213ENST00000514949 RBM42Q9BTD8 480 aaKnown RBP21.65■■□□□ 1.06
SNX2-213ENST00000514949 SOX12O15370 315 aa21.64■■□□□ 1.06
SNX2-213ENST00000514949 OTUD7AQ8TE49 926 aaPredicted RBP21.64■■□□□ 1.06
SNX2-213ENST00000514949 XRCC6P12956 609 aaKnown RBP eCLIP21.64■■□□□ 1.05
SNX2-213ENST00000514949 GNAT3A8MTJ3 354 aa21.62■■□□□ 1.05
SNX2-213ENST00000514949 SKOR2Q2VWA4 1001 aaPredicted RBP21.62■■□□□ 1.05
SNX2-213ENST00000514949 CASC1Q6TDU7 716 aa21.62■■□□□ 1.05
SNX2-213ENST00000514949 N4BP2Q86UW6 1770 aaPredicted RBP21.62■■□□□ 1.05
SNX2-213ENST00000514949 FAM208AQ9UK61 1670 aaKnown RBP21.62■■□□□ 1.05
SNX2-213ENST00000514949 HOXC9P31274 260 aa21.62■■□□□ 1.05
SNX2-213ENST00000514949 NLRP6P59044 892 aa21.61■■□□□ 1.05
SNX2-213ENST00000514949 STK31Q9BXU1 1019 aa21.61■■□□□ 1.05
SNX2-213ENST00000514949 FER1L4A9Z1Z3 1794 aa21.61■■□□□ 1.05
SNX2-213ENST00000514949 GNAI2P04899 355 aa21.61■■□□□ 1.05
SNX2-213ENST00000514949 HSP90AA1P07900 732 aaKnown RBP21.61■■□□□ 1.05
SNX2-213ENST00000514949 CCDC30Q5VVM6 783 aa21.61■■□□□ 1.05
SNX2-213ENST00000514949 SMARCA5O60264 1052 aaPredicted RBP21.59■■□□□ 1.05
SNX2-213ENST00000514949 MRE11P49959 708 aa21.59■■□□□ 1.05
SNX2-213ENST00000514949 PXDNLA1KZ92 1463 aa21.59■■□□□ 1.05
SNX2-213ENST00000514949 F6X3S4 739 aa21.59■■□□□ 1.05
SNX2-213ENST00000514949 REC8O95072 547 aa21.59■■□□□ 1.05
SNX2-213ENST00000514949 SALL3Q9BXA9 1300 aa21.59■■□□□ 1.05
SNX2-213ENST00000514949 GNAI3P08754 354 aa21.58■■□□□ 1.05
SNX2-213ENST00000514949 FLIIQ13045 1269 aa21.58■■□□□ 1.05
SNX2-213ENST00000514949 MAP3K5Q99683 1374 aa21.58■■□□□ 1.05
SNX2-213ENST00000514949 PDE1AP54750 535 aa21.58■■□□□ 1.04
SNX2-213ENST00000514949 GZF1Q9H116 711 aaPredicted RBP21.58■■□□□ 1.04
SNX2-213ENST00000514949 SLC4A10Q6U841 1118 aa21.57■■□□□ 1.04
SNX2-213ENST00000514949 IL17REQ8NFR9 667 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms