RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 GCC1Q96CN9 775 aa15.69■□□□□ 0.1
SDHA-216ENST00000514027 PTPRUQ92729 1446 aa15.69■□□□□ 0.1
SDHA-216ENST00000514027 PEAK1Q9H792 1746 aa15.68■□□□□ 0.1
SDHA-216ENST00000514027 PLEKHG3A1L390 1219 aa15.68■□□□□ 0.1
SDHA-216ENST00000514027 PLCB2Q00722 1185 aa15.67■□□□□ 0.1
SDHA-216ENST00000514027 L1TD1Q5T7N2 865 aaKnown RBP15.67■□□□□ 0.1
SDHA-216ENST00000514027 ANTXR1Q9H6X2 564 aa15.67■□□□□ 0.1
SDHA-216ENST00000514027 AMOTL2Q9Y2J4 779 aa15.67■□□□□ 0.1
SDHA-216ENST00000514027 SIRT2Q8IXJ6 389 aa15.67■□□□□ 0.1
SDHA-216ENST00000514027 NALCNQ8IZF0 1738 aa15.66■□□□□ 0.1
SDHA-216ENST00000514027 PDE4CQ08493 712 aa15.66■□□□□ 0.1
SDHA-216ENST00000514027 NGDNQ8NEJ9 315 aaKnown RBP15.65■□□□□ 0.1
SDHA-216ENST00000514027 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
SDHA-216ENST00000514027 PRDM4Q9UKN5 801 aa15.65■□□□□ 0.1
SDHA-216ENST00000514027 BMP2KLQ5H9B9 411 aa15.64■□□□□ 0.09
SDHA-216ENST00000514027 HSCBQ8IWL3 235 aa15.64■□□□□ 0.09
SDHA-216ENST00000514027 RIMS1Q86UR5 1692 aaKnown RBP15.64■□□□□ 0.09
SDHA-216ENST00000514027 MAP3K19Q56UN5 1328 aa15.63■□□□□ 0.09
SDHA-216ENST00000514027 MIS18AQ9NYP9 233 aa15.63■□□□□ 0.09
SDHA-216ENST00000514027 USP31Q70CQ4 1352 aa15.62■□□□□ 0.09
SDHA-216ENST00000514027 CHL1O00533 1208 aa15.62■□□□□ 0.09
SDHA-216ENST00000514027 FOXO3O43524 673 aa15.62■□□□□ 0.09
SDHA-216ENST00000514027 HAP1P54257 671 aaPredicted RBP15.62■□□□□ 0.09
SDHA-216ENST00000514027 RGPD8O14715 1765 aaPredicted RBP15.62■□□□□ 0.09
SDHA-216ENST00000514027 RGPD1P0DJD0 1748 aa15.62■□□□□ 0.09
SDHA-216ENST00000514027 FMN2Q9NZ56 1722 aa15.62■□□□□ 0.09
SDHA-216ENST00000514027 AMPHP49418 695 aa15.62■□□□□ 0.09
SDHA-216ENST00000514027 DIP2AQ14689 1571 aa15.61■□□□□ 0.09
SDHA-216ENST00000514027 RTF1Q92541 710 aaKnown RBP15.61■□□□□ 0.09
SDHA-216ENST00000514027 MSH6P52701 1360 aa15.61■□□□□ 0.09
SDHA-216ENST00000514027 TTC21AQ8NDW8 1320 aa15.6■□□□□ 0.09
SDHA-216ENST00000514027 ARHGEF10O15013 1369 aa15.6■□□□□ 0.09
SDHA-216ENST00000514027 FLT4P35916 1363 aa15.6■□□□□ 0.09
SDHA-216ENST00000514027 MTHFSDQ2M296 383 aaKnown RBP15.6■□□□□ 0.09
SDHA-216ENST00000514027 PDCL3Q9H2J4 239 aa15.6■□□□□ 0.09
SDHA-216ENST00000514027 SSH2Q76I76 1423 aa15.6■□□□□ 0.09
SDHA-216ENST00000514027 RBM25P49756 843 aaKnown RBP15.59■□□□□ 0.09
SDHA-216ENST00000514027 NUTM2GQ5VZR2 741 aa15.59■□□□□ 0.09
SDHA-216ENST00000514027 INTS3Q68E01 1043 aaKnown RBP15.59■□□□□ 0.09
SDHA-216ENST00000514027 TBC1D9Q6ZT07 1266 aa15.59■□□□□ 0.09
SDHA-216ENST00000514027 SBNO1A3KN83 1393 aa15.59■□□□□ 0.09
SDHA-216ENST00000514027 APBB1O00213 710 aa15.59■□□□□ 0.09
SDHA-216ENST00000514027 RGS12O14924 1447 aa15.59■□□□□ 0.09
SDHA-216ENST00000514027 TSPYL4Q9UJ04 414 aa15.59■□□□□ 0.09
SDHA-216ENST00000514027 SLIT1O75093 1534 aa15.58■□□□□ 0.09
SDHA-216ENST00000514027 KIF24Q5T7B8 1368 aa15.58■□□□□ 0.09
SDHA-216ENST00000514027 KIAA0232Q92628 1395 aa15.58■□□□□ 0.09
SDHA-216ENST00000514027 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
SDHA-216ENST00000514027 TBX22Q9Y458 520 aa15.58■□□□□ 0.08
SDHA-216ENST00000514027 CRB1P82279 1406 aa15.58■□□□□ 0.08
SDHA-216ENST00000514027 FER1L4A9Z1Z3 1794 aa15.58■□□□□ 0.08
SDHA-216ENST00000514027 CHMP5Q9NZZ3 219 aa15.58■□□□□ 0.08
SDHA-216ENST00000514027 NLRP6P59044 892 aa15.57■□□□□ 0.08
SDHA-216ENST00000514027 ARHGAP23Q9P227 1491 aa15.57■□□□□ 0.08
SDHA-216ENST00000514027 PTPRCP08575 1304 aa15.57■□□□□ 0.08
SDHA-216ENST00000514027 SLC4A10Q6U841 1118 aa15.56■□□□□ 0.08
SDHA-216ENST00000514027 C14orf37Q86TY3 774 aa15.56■□□□□ 0.08
SDHA-216ENST00000514027 EYA1Q99502 592 aa15.56■□□□□ 0.08
SDHA-216ENST00000514027 CEP170BQ9Y4F5 1589 aaPredicted RBP15.56■□□□□ 0.08
SDHA-216ENST00000514027 PIK3C2AO00443 1686 aa15.56■□□□□ 0.08
SDHA-216ENST00000514027 THEMISQ8N1K5 641 aaPredicted RBP15.56■□□□□ 0.08
SDHA-216ENST00000514027 MEIS3Q99687 375 aa15.56■□□□□ 0.08
SDHA-216ENST00000514027 ATP10DQ9P241 1426 aa15.56■□□□□ 0.08
SDHA-216ENST00000514027 CDC45O75419 566 aa15.55■□□□□ 0.08
SDHA-216ENST00000514027 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
SDHA-216ENST00000514027 GSPT1P15170 499 aaKnown RBP15.55■□□□□ 0.08
SDHA-216ENST00000514027 CEP85Q6P2H3 762 aa15.55■□□□□ 0.08
SDHA-216ENST00000514027 ANKRD44Q8N8A2 993 aa15.55■□□□□ 0.08
SDHA-216ENST00000514027 DCTPP1Q9H773 170 aa15.55■□□□□ 0.08
SDHA-216ENST00000514027 PLEKHM2Q8IWE5 1019 aa15.55■□□□□ 0.08
SDHA-216ENST00000514027 C16orf71Q8IYS4 520 aaPredicted RBP15.55■□□□□ 0.08
SDHA-216ENST00000514027 TPM2P07951 284 aa15.54■□□□□ 0.08
SDHA-216ENST00000514027 LTV1Q96GA3 475 aaPredicted RBP15.54■□□□□ 0.08
SDHA-216ENST00000514027 RTL1A6NKG5 1358 aa15.54■□□□□ 0.08
SDHA-216ENST00000514027 F6X3S4 739 aa15.53■□□□□ 0.08
SDHA-216ENST00000514027 KCNA6P17658 529 aa15.53■□□□□ 0.08
SDHA-216ENST00000514027 GAS2L2Q8NHY3 880 aa15.53■□□□□ 0.08
SDHA-216ENST00000514027 IGSF1Q8N6C5 1336 aa15.53■□□□□ 0.08
SDHA-216ENST00000514027 SMARCA5O60264 1052 aaPredicted RBP15.53■□□□□ 0.08
SDHA-216ENST00000514027 MCM4P33991 863 aa15.53■□□□□ 0.08
SDHA-216ENST00000514027 G2E3Q7L622 706 aa15.53■□□□□ 0.08
SDHA-216ENST00000514027 RPAP2Q8IXW5 612 aaPredicted RBP15.53■□□□□ 0.08
SDHA-216ENST00000514027 KDRP35968 1356 aa15.53■□□□□ 0.08
SDHA-216ENST00000514027 OTUD7AQ8TE49 926 aaPredicted RBP15.52■□□□□ 0.08
SDHA-216ENST00000514027 SNX21Q969T3 373 aa15.52■□□□□ 0.08
SDHA-216ENST00000514027 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.08
SDHA-216ENST00000514027 XRCC6P12956 609 aaKnown RBP eCLIP15.52■□□□□ 0.07
SDHA-216ENST00000514027 TTC22Q5TAA0 569 aa15.52■□□□□ 0.07
SDHA-216ENST00000514027 NECTIN2Q92692 538 aa15.52■□□□□ 0.07
SDHA-216ENST00000514027 KIF2CQ99661 725 aa15.52■□□□□ 0.07
SDHA-216ENST00000514027 FBXO3Q9UK99 471 aa15.52■□□□□ 0.07
SDHA-216ENST00000514027 ABTB2Q8N961 1025 aa15.51■□□□□ 0.07
SDHA-216ENST00000514027 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
SDHA-216ENST00000514027 XRN1Q8IZH2 1706 aaKnown RBP15.51■□□□□ 0.07
SDHA-216ENST00000514027 HOXC9P31274 260 aa15.51■□□□□ 0.07
SDHA-216ENST00000514027 STK31Q9BXU1 1019 aa15.51■□□□□ 0.07
SDHA-216ENST00000514027 GZF1Q9H116 711 aaPredicted RBP15.51■□□□□ 0.07
SDHA-216ENST00000514027 CD2BP2O95400 341 aaKnown RBP15.5■□□□□ 0.07
SDHA-216ENST00000514027 NCOA3Q9Y6Q9 1424 aa15.5■□□□□ 0.07
SDHA-216ENST00000514027 GNAT3A8MTJ3 354 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms