RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 LHX6Q9UPM6 363 aa10.36□□□□□ -0.75
CDC42-205ENST00000498236 AMOTL2Q9Y2J4 779 aa10.36□□□□□ -0.75
CDC42-205ENST00000498236 ATP7BP35670 1465 aa10.36□□□□□ -0.75
CDC42-205ENST00000498236 NPHP4O75161 1426 aaPredicted RBP10.35□□□□□ -0.75
CDC42-205ENST00000498236 CCDC184Q52MB2 194 aa10.35□□□□□ -0.75
CDC42-205ENST00000498236 TMC1Q8TDI8 760 aa10.35□□□□□ -0.75
CDC42-205ENST00000498236 NSD2O96028 1365 aa10.35□□□□□ -0.75
CDC42-205ENST00000498236 NSD3Q9BZ95 1437 aa10.34□□□□□ -0.75
CDC42-205ENST00000498236 KDM4FA0A1W2PPD8 638 aa10.34□□□□□ -0.75
CDC42-205ENST00000498236 FCHSD2O94868 740 aa10.34□□□□□ -0.75
CDC42-205ENST00000498236 CC2D1BQ5T0F9 858 aaKnown RBP10.34□□□□□ -0.75
CDC42-205ENST00000498236 TERF2IPQ9NYB0 399 aa10.34□□□□□ -0.75
CDC42-205ENST00000498236 CD163L1Q9NR16 1453 aa10.34□□□□□ -0.75
CDC42-205ENST00000498236 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
CDC42-205ENST00000498236 CHD2O14647 1828 aaKnown RBP10.33□□□□□ -0.76
CDC42-205ENST00000498236 PSDA5PKW4 1024 aaPredicted RBP10.33□□□□□ -0.76
CDC42-205ENST00000498236 HIC1Q14526 733 aa10.33□□□□□ -0.76
CDC42-205ENST00000498236 GTF3C3Q9Y5Q9 886 aa10.33□□□□□ -0.76
CDC42-205ENST00000498236 A0A1W2PP64 1363 aa10.33□□□□□ -0.76
CDC42-205ENST00000498236 INSRP06213 1382 aa10.33□□□□□ -0.76
CDC42-205ENST00000498236 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
CDC42-205ENST00000498236 TRIM66O15016 1216 aa10.32□□□□□ -0.76
CDC42-205ENST00000498236 GNPATO15228 680 aa10.32□□□□□ -0.76
CDC42-205ENST00000498236 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
CDC42-205ENST00000498236 PNISRQ8TF01 805 aaKnown RBP10.32□□□□□ -0.76
CDC42-205ENST00000498236 EPAS1Q99814 870 aa10.32□□□□□ -0.76
CDC42-205ENST00000498236 HCSTQ9UBK5 93 aa10.32□□□□□ -0.76
CDC42-205ENST00000498236 AXIN2Q9Y2T1 843 aa10.32□□□□□ -0.76
CDC42-205ENST00000498236 CPSF1Q10570 1443 aaKnown RBP10.32□□□□□ -0.76
CDC42-205ENST00000498236 NWD1Q149M9 1564 aa10.31□□□□□ -0.76
CDC42-205ENST00000498236 PHF14O94880 888 aa10.31□□□□□ -0.76
CDC42-205ENST00000498236 PPP2R1AP30153 589 aa10.31□□□□□ -0.76
CDC42-205ENST00000498236 MAP2K5Q13163 448 aa10.31□□□□□ -0.76
CDC42-205ENST00000498236 HDGFL2Q7Z4V5 671 aaPredicted RBP10.31□□□□□ -0.76
CDC42-205ENST00000498236 NUDT16Q96DE0 195 aaKnown RBP10.31□□□□□ -0.76
CDC42-205ENST00000498236 KCNA6P17658 529 aa10.3□□□□□ -0.76
CDC42-205ENST00000498236 CABP1Q9NZU7 370 aa10.3□□□□□ -0.76
CDC42-205ENST00000498236 PPIP5K1Q6PFW1 1433 aa10.3□□□□□ -0.76
CDC42-205ENST00000498236 CDC42BPGQ6DT37 1551 aa10.3□□□□□ -0.76
CDC42-205ENST00000498236 TOPAZ1Q8N9V7 1692 aa10.29□□□□□ -0.76
CDC42-205ENST00000498236 ARHGAP33O14559 1287 aa10.29□□□□□ -0.76
CDC42-205ENST00000498236 POTEEQ6S8J3 1075 aa10.29□□□□□ -0.76
CDC42-205ENST00000498236 ANKARQ7Z5J8 1434 aa10.29□□□□□ -0.76
CDC42-205ENST00000498236 PRR36Q9H6K5 1346 aa10.29□□□□□ -0.76
CDC42-205ENST00000498236 EDC4Q6P2E9 1401 aaKnown RBP10.28□□□□□ -0.76
CDC42-205ENST00000498236 PLEKHG3A1L390 1219 aa10.28□□□□□ -0.76
CDC42-205ENST00000498236 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
CDC42-205ENST00000498236 PDE4DQ08499 809 aa10.28□□□□□ -0.76
CDC42-205ENST00000498236 PTGDRQ13258 359 aa10.28□□□□□ -0.76
CDC42-205ENST00000498236 CNGB1Q14028 1251 aaPredicted RBP10.28□□□□□ -0.76
CDC42-205ENST00000498236 LMTK3Q96Q04 1460 aa10.28□□□□□ -0.76
CDC42-205ENST00000498236 IRF6O14896 467 aa10.27□□□□□ -0.77
CDC42-205ENST00000498236 MORC1Q86VD1 984 aa10.27□□□□□ -0.77
CDC42-205ENST00000498236 FAM9BQ8IZU0 186 aa10.27□□□□□ -0.77
CDC42-205ENST00000498236 CCDC102AQ96A19 550 aa10.27□□□□□ -0.77
CDC42-205ENST00000498236 GPBP1L1Q9HC44 474 aaPredicted RBP10.27□□□□□ -0.77
CDC42-205ENST00000498236 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
CDC42-205ENST00000498236 NKTRP30414 1462 aaKnown RBP10.27□□□□□ -0.77
CDC42-205ENST00000498236 POLR3AO14802 1390 aaPredicted RBP10.26□□□□□ -0.77
CDC42-205ENST00000498236 ADGRL3Q9HAR2 1447 aa10.26□□□□□ -0.77
CDC42-205ENST00000498236 FYB1O15117 783 aa10.26□□□□□ -0.77
CDC42-205ENST00000498236 MAP3K7O43318 606 aa10.26□□□□□ -0.77
CDC42-205ENST00000498236 TYW1BQ6NUM6 668 aa10.26□□□□□ -0.77
CDC42-205ENST00000498236 ADGRD1Q6QNK2 874 aa10.26□□□□□ -0.77
CDC42-205ENST00000498236 PCDHGA10Q9Y5H3 936 aa10.26□□□□□ -0.77
CDC42-205ENST00000498236 ITSN1Q15811 1721 aa10.26□□□□□ -0.77
CDC42-205ENST00000498236 MON2Q7Z3U7 1717 aa10.26□□□□□ -0.77
CDC42-205ENST00000498236 ANKRD26Q9UPS8 1709 aa10.26□□□□□ -0.77
CDC42-205ENST00000498236 AKAP12Q02952 1782 aa10.26□□□□□ -0.77
CDC42-205ENST00000498236 NCOA3Q9Y6Q9 1424 aa10.25□□□□□ -0.77
CDC42-205ENST00000498236 FMN2Q9NZ56 1722 aa10.25□□□□□ -0.77
CDC42-205ENST00000498236 HNRNPUQ00839 825 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDC42-205ENST00000498236 FBXW7Q969H0 707 aa10.25□□□□□ -0.77
CDC42-205ENST00000498236 KDM4CQ9H3R0 1056 aa10.25□□□□□ -0.77
CDC42-205ENST00000498236 DAXXQ9UER7 740 aaPredicted RBP10.25□□□□□ -0.77
CDC42-205ENST00000498236 ZBED9Q6R2W3 1325 aa10.25□□□□□ -0.77
CDC42-205ENST00000498236 FECHP22830 423 aa10.24□□□□□ -0.77
CDC42-205ENST00000498236 RBM33Q96EV2 1170 aaKnown RBP10.24□□□□□ -0.77
CDC42-205ENST00000498236 NALCNQ8IZF0 1738 aa10.24□□□□□ -0.77
CDC42-205ENST00000498236 BLMP54132 1417 aaPredicted RBP10.24□□□□□ -0.77
CDC42-205ENST00000498236 KIF20BQ96Q89 1820 aa10.23□□□□□ -0.77
CDC42-205ENST00000498236 NRKQ7Z2Y5 1582 aa10.23□□□□□ -0.77
CDC42-205ENST00000498236 TK2O00142 265 aa10.23□□□□□ -0.77
CDC42-205ENST00000498236 CDHR5Q9HBB8 845 aa10.23□□□□□ -0.77
CDC42-205ENST00000498236 SSH2Q76I76 1423 aa10.23□□□□□ -0.77
CDC42-205ENST00000498236 ACEP12821 1306 aa10.22□□□□□ -0.77
CDC42-205ENST00000498236 USP6P35125 1406 aa10.22□□□□□ -0.77
CDC42-205ENST00000498236 FOSBP53539 338 aa10.21□□□□□ -0.77
CDC42-205ENST00000498236 HSPA2P54652 639 aa10.21□□□□□ -0.77
CDC42-205ENST00000498236 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.77
CDC42-205ENST00000498236 STRCQ7RTU9 1775 aa10.21□□□□□ -0.78
CDC42-205ENST00000498236 DCCP43146 1447 aa10.2□□□□□ -0.78
CDC42-205ENST00000498236 AMHR2Q16671 573 aa10.2□□□□□ -0.78
CDC42-205ENST00000498236 AATKQ6ZMQ8 1374 aa10.2□□□□□ -0.78
CDC42-205ENST00000498236 ERICH6Q7L0X2 663 aa10.2□□□□□ -0.78
CDC42-205ENST00000498236 PNPLA6Q8IY17 1366 aa10.2□□□□□ -0.78
CDC42-205ENST00000498236 TTC21AQ8NDW8 1320 aa10.2□□□□□ -0.78
CDC42-205ENST00000498236 GGNBP2Q9H3C7 697 aa10.2□□□□□ -0.78
CDC42-205ENST00000498236 SMG6Q86US8 1419 aaKnown RBP10.19□□□□□ -0.78
CDC42-205ENST00000498236 TTC21BQ7Z4L5 1316 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms