RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 NEURL4Q96JN8 1562 aa13.82□□□□□ -0.2
MACF1-225ENST00000497807 UQCRHLA0A096LP55 91 aa13.82□□□□□ -0.2
MACF1-225ENST00000497807 UQCRHP07919 91 aa13.82□□□□□ -0.2
MACF1-225ENST00000497807 NOP2P46087 812 aaKnown RBP13.82□□□□□ -0.2
MACF1-225ENST00000497807 KIF3CO14782 793 aa13.81□□□□□ -0.2
MACF1-225ENST00000497807 PPP1R12AO14974 1030 aaPredicted RBP13.81□□□□□ -0.2
MACF1-225ENST00000497807 DHX16O60231 1041 aaKnown RBP13.81□□□□□ -0.2
MACF1-225ENST00000497807 SSFA2P28290 1259 aa13.81□□□□□ -0.2
MACF1-225ENST00000497807 TBX22Q9Y458 520 aa13.81□□□□□ -0.2
MACF1-225ENST00000497807 CALCOCO1Q9P1Z2 691 aa13.81□□□□□ -0.2
MACF1-225ENST00000497807 RPS6KL1Q9Y6S9 549 aa13.81□□□□□ -0.2
MACF1-225ENST00000497807 MRE11P49959 708 aa13.8□□□□□ -0.2
MACF1-225ENST00000497807 MYH16Q9H6N6 1097 aa13.8□□□□□ -0.2
MACF1-225ENST00000497807 POGKQ9P215 609 aa13.8□□□□□ -0.2
MACF1-225ENST00000497807 ZNF771Q7L3S4 317 aaPredicted RBP13.8□□□□□ -0.2
MACF1-225ENST00000497807 MTA3Q9BTC8 594 aa13.8□□□□□ -0.2
MACF1-225ENST00000497807 ISY1Q9ULR0 285 aaKnown RBP13.8□□□□□ -0.2
MACF1-225ENST00000497807 NINLQ9Y2I6 1382 aa13.79□□□□□ -0.2
MACF1-225ENST00000497807 CTAGE5O15320 804 aa13.79□□□□□ -0.2
MACF1-225ENST00000497807 ANAPC4Q9UJX5 808 aa13.79□□□□□ -0.2
MACF1-225ENST00000497807 SMC3Q9UQE7 1217 aa13.79□□□□□ -0.2
MACF1-225ENST00000497807 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
MACF1-225ENST00000497807 RAD50Q92878 1312 aa13.79□□□□□ -0.2
MACF1-225ENST00000497807 CBX1P83916 185 aa13.79□□□□□ -0.2
MACF1-225ENST00000497807 ZRSR2Q15696 482 aaKnown RBP13.79□□□□□ -0.2
MACF1-225ENST00000497807 CCDC97Q96F63 343 aaPredicted RBP13.79□□□□□ -0.2
MACF1-225ENST00000497807 C11orf91Q3C1V1 193 aa13.78□□□□□ -0.2
MACF1-225ENST00000497807 SWT1Q5T5J6 900 aaKnown RBP13.78□□□□□ -0.2
MACF1-225ENST00000497807 PIK3C2GO75747 1445 aa13.78□□□□□ -0.2
MACF1-225ENST00000497807 MYOM2P54296 1465 aa13.78□□□□□ -0.2
MACF1-225ENST00000497807 METP08581 1390 aa13.78□□□□□ -0.2
MACF1-225ENST00000497807 GUCY2CP25092 1073 aa13.78□□□□□ -0.2
MACF1-225ENST00000497807 MED14O60244 1454 aa13.78□□□□□ -0.2
MACF1-225ENST00000497807 GABPB1Q06547 395 aaPredicted RBP13.77□□□□□ -0.2
MACF1-225ENST00000497807 ICE2Q659A1 982 aa13.77□□□□□ -0.2
MACF1-225ENST00000497807 ADAMTS13Q76LX8 1427 aa13.77□□□□□ -0.2
MACF1-225ENST00000497807 JMYQ8N9B5 988 aa13.77□□□□□ -0.2
MACF1-225ENST00000497807 PPLO60437 1756 aa13.77□□□□□ -0.21
MACF1-225ENST00000497807 ANP32CO43423 234 aa13.77□□□□□ -0.21
MACF1-225ENST00000497807 TNNT3P45378 269 aaPredicted RBP13.77□□□□□ -0.21
MACF1-225ENST00000497807 ATL2Q8NHH9 583 aa13.77□□□□□ -0.21
MACF1-225ENST00000497807 KDM4CQ9H3R0 1056 aa13.77□□□□□ -0.21
MACF1-225ENST00000497807 AMOTL2Q9Y2J4 779 aa13.77□□□□□ -0.21
MACF1-225ENST00000497807 IPO7O95373 1038 aaKnown RBP13.76□□□□□ -0.21
MACF1-225ENST00000497807 CARD11Q9BXL7 1154 aa13.76□□□□□ -0.21
MACF1-225ENST00000497807 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
MACF1-225ENST00000497807 ROCK2O75116 1388 aaKnown RBP13.76□□□□□ -0.21
MACF1-225ENST00000497807 LRCH2Q5VUJ6 765 aa13.76□□□□□ -0.21
MACF1-225ENST00000497807 STRCQ7RTU9 1775 aa13.75□□□□□ -0.21
MACF1-225ENST00000497807 NRXN1Q9ULB1 1477 aa13.75□□□□□ -0.21
MACF1-225ENST00000497807 RBM33Q96EV2 1170 aaKnown RBP13.75□□□□□ -0.21
MACF1-225ENST00000497807 PANK2Q9BZ23 570 aa13.75□□□□□ -0.21
MACF1-225ENST00000497807 LIG1P18858 919 aa13.75□□□□□ -0.21
MACF1-225ENST00000497807 CSPP1Q1MSJ5 1256 aa13.75□□□□□ -0.21
MACF1-225ENST00000497807 NOL8Q76FK4 1167 aaKnown RBP13.75□□□□□ -0.21
MACF1-225ENST00000497807 ZNF335Q9H4Z2 1342 aaPredicted RBP13.75□□□□□ -0.21
MACF1-225ENST00000497807 CCT2P78371 535 aaKnown RBP13.74□□□□□ -0.21
MACF1-225ENST00000497807 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
MACF1-225ENST00000497807 KCNA6P17658 529 aa13.74□□□□□ -0.21
MACF1-225ENST00000497807 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
MACF1-225ENST00000497807 PROCA1Q8NCQ7 364 aaPredicted RBP13.74□□□□□ -0.21
MACF1-225ENST00000497807 BACH2Q9BYV9 841 aa13.74□□□□□ -0.21
MACF1-225ENST00000497807 KNSTRNQ9Y448 316 aa13.74□□□□□ -0.21
MACF1-225ENST00000497807 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
MACF1-225ENST00000497807 MS4A1P11836 297 aa13.73□□□□□ -0.21
MACF1-225ENST00000497807 ZNF280DQ6N043 979 aa13.73□□□□□ -0.21
MACF1-225ENST00000497807 PIK3R5Q8WYR1 880 aa13.73□□□□□ -0.21
MACF1-225ENST00000497807 PAX7P23759 505 aa13.73□□□□□ -0.21
MACF1-225ENST00000497807 ZSCAN30Q86W11 494 aa13.73□□□□□ -0.21
MACF1-225ENST00000497807 R3HCC1Q9Y3T6 440 aaKnown RBP13.73□□□□□ -0.21
MACF1-225ENST00000497807 IFT172Q9UG01 1749 aa13.73□□□□□ -0.21
MACF1-225ENST00000497807 SAFB2Q14151 953 aaKnown RBP eCLIP13.72□□□□□ -0.21
MACF1-225ENST00000497807 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
MACF1-225ENST00000497807 TESPA1A2RU30 521 aaPredicted RBP13.72□□□□□ -0.21
MACF1-225ENST00000497807 ERCC3P19447 782 aa13.72□□□□□ -0.21
MACF1-225ENST00000497807 BIRC2Q13490 618 aa13.72□□□□□ -0.21
MACF1-225ENST00000497807 IQGAP1P46940 1657 aa13.71□□□□□ -0.21
MACF1-225ENST00000497807 CD151P48509 253 aa13.71□□□□□ -0.21
MACF1-225ENST00000497807 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.21
MACF1-225ENST00000497807 NUCKS1Q9H1E3 243 aaKnown RBP13.71□□□□□ -0.21
MACF1-225ENST00000497807 SUFUQ9UMX1 484 aa13.71□□□□□ -0.21
MACF1-225ENST00000497807 POLR1AO95602 1720 aaPredicted RBP13.71□□□□□ -0.21
MACF1-225ENST00000497807 DNAJC21Q5F1R6 531 aaKnown RBP13.71□□□□□ -0.22
MACF1-225ENST00000497807 RBM26Q5T8P6 1007 aaKnown RBP13.71□□□□□ -0.22
MACF1-225ENST00000497807 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.22
MACF1-225ENST00000497807 SUDS3Q9H7L9 328 aaPredicted RBP13.71□□□□□ -0.22
MACF1-225ENST00000497807 PAXBP1Q9Y5B6 917 aa13.71□□□□□ -0.22
MACF1-225ENST00000497807 PDE4AP27815 886 aa13.7□□□□□ -0.22
MACF1-225ENST00000497807 FOXD4Q12950 439 aaPredicted RBP13.7□□□□□ -0.22
MACF1-225ENST00000497807 NEFHP12036 1026 aa13.7□□□□□ -0.22
MACF1-225ENST00000497807 PTPRUQ92729 1446 aa13.7□□□□□ -0.22
MACF1-225ENST00000497807 NRXN3Q9Y4C0 1643 aa13.7□□□□□ -0.22
MACF1-225ENST00000497807 ATP2B3Q16720 1220 aa13.69□□□□□ -0.22
MACF1-225ENST00000497807 GET4Q7L5D6 327 aaPredicted RBP13.69□□□□□ -0.22
MACF1-225ENST00000497807 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
MACF1-225ENST00000497807 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
MACF1-225ENST00000497807 PRAM1Q96QH2 718 aa13.69□□□□□ -0.22
MACF1-225ENST00000497807 PIK3R4Q99570 1358 aa13.69□□□□□ -0.22
MACF1-225ENST00000497807 APBB1O00213 710 aa13.68□□□□□ -0.22
MACF1-225ENST00000497807 TRDNQ13061 729 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms