RNA–Protein interactions for RNA: ENST00000495265.5

BRD9-212, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 2,843 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-212ENST00000495265 CCDC39Q9UFE4 941 aa21.69■■□□□ 1.06
BRD9-212ENST00000495265 CABP1Q9NZU7 370 aa21.68■■□□□ 1.06
BRD9-212ENST00000495265 ZFYVE9O95405 1425 aa21.68■■□□□ 1.06
BRD9-212ENST00000495265 MCM5P33992 734 aa21.67■■□□□ 1.06
BRD9-212ENST00000495265 NEO1Q92859 1461 aa21.67■■□□□ 1.06
BRD9-212ENST00000495265 CASC1Q6TDU7 716 aa21.66■■□□□ 1.06
BRD9-212ENST00000495265 DYNC1I1O14576 645 aa21.66■■□□□ 1.06
BRD9-212ENST00000495265 ANKRD44Q8N8A2 993 aa21.66■■□□□ 1.06
BRD9-212ENST00000495265 FAM83GA6ND36 823 aa21.65■■□□□ 1.06
BRD9-212ENST00000495265 SASS6Q6UVJ0 657 aa21.65■■□□□ 1.06
BRD9-212ENST00000495265 POGZQ7Z3K3 1410 aa21.65■■□□□ 1.06
BRD9-212ENST00000495265 ZBTB7CA1YPR0 619 aa21.65■■□□□ 1.06
BRD9-212ENST00000495265 ATP10DQ9P241 1426 aa21.64■■□□□ 1.06
BRD9-212ENST00000495265 DIP2BQ9P265 1576 aa21.64■■□□□ 1.06
BRD9-212ENST00000495265 PTPRMP28827 1452 aa21.64■■□□□ 1.05
BRD9-212ENST00000495265 ABCC3O15438 1527 aa21.64■■□□□ 1.05
BRD9-212ENST00000495265 SIGLEC1Q9BZZ2 1709 aa21.64■■□□□ 1.05
BRD9-212ENST00000495265 FRMPD1Q5SYB0 1578 aa21.63■■□□□ 1.05
BRD9-212ENST00000495265 REC8O95072 547 aa21.63■■□□□ 1.05
BRD9-212ENST00000495265 DCTN1Q14203 1278 aa21.63■■□□□ 1.05
BRD9-212ENST00000495265 EMILIN1Q9Y6C2 1016 aa21.63■■□□□ 1.05
BRD9-212ENST00000495265 YEATS2Q9ULM3 1422 aa21.63■■□□□ 1.05
BRD9-212ENST00000495265 CEP85Q6P2H3 762 aa21.63■■□□□ 1.05
BRD9-212ENST00000495265 CDK19Q9BWU1 502 aa21.63■■□□□ 1.05
BRD9-212ENST00000495265 HECW2Q9P2P5 1572 aa21.63■■□□□ 1.05
BRD9-212ENST00000495265 TMX3Q96JJ7 454 aa21.62■■□□□ 1.05
BRD9-212ENST00000495265 ERC2O15083 957 aa21.61■■□□□ 1.05
BRD9-212ENST00000495265 PTMAP06454 111 aaKnown RBP21.61■■□□□ 1.05
BRD9-212ENST00000495265 NEK4P51957 841 aa21.61■■□□□ 1.05
BRD9-212ENST00000495265 PIK3C2BO00750 1634 aa21.61■■□□□ 1.05
BRD9-212ENST00000495265 KIF24Q5T7B8 1368 aa21.61■■□□□ 1.05
BRD9-212ENST00000495265 KIF20BQ96Q89 1820 aa21.61■■□□□ 1.05
BRD9-212ENST00000495265 MBD3O95983 291 aa21.61■■□□□ 1.05
BRD9-212ENST00000495265 YTHDC2Q9H6S0 1430 aaKnown RBP21.61■■□□□ 1.05
BRD9-212ENST00000495265 IDI1Q13907 227 aa21.61■■□□□ 1.05
BRD9-212ENST00000495265 MPNDQ8N594 471 aa21.6■■□□□ 1.05
BRD9-212ENST00000495265 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.6■■□□□ 1.05
BRD9-212ENST00000495265 KRT24Q2M2I5 525 aa21.6■■□□□ 1.05
BRD9-212ENST00000495265 RPAP2Q8IXW5 612 aaPredicted RBP21.6■■□□□ 1.05
BRD9-212ENST00000495265 TSPY26PQ9H489 355 aa21.6■■□□□ 1.05
BRD9-212ENST00000495265 IL13P35225 146 aa21.59■■□□□ 1.05
BRD9-212ENST00000495265 JARID2Q92833 1246 aaPredicted RBP21.59■■□□□ 1.05
BRD9-212ENST00000495265 BRD1O95696 1058 aa21.58■■□□□ 1.05
BRD9-212ENST00000495265 NOL8Q76FK4 1167 aaKnown RBP21.58■■□□□ 1.05
BRD9-212ENST00000495265 MLH3Q9UHC1 1453 aa21.58■■□□□ 1.04
BRD9-212ENST00000495265 FOXD4L6Q3SYB3 417 aaPredicted RBP21.58■■□□□ 1.04
BRD9-212ENST00000495265 FOXD4L3Q6VB84 417 aaPredicted RBP21.58■■□□□ 1.04
BRD9-212ENST00000495265 MTERF4Q7Z6M4 381 aaKnown RBP21.58■■□□□ 1.04
BRD9-212ENST00000495265 MEIS3Q99687 375 aa21.57■■□□□ 1.04
BRD9-212ENST00000495265 RIMS2Q9UQ26 1411 aa21.57■■□□□ 1.04
BRD9-212ENST00000495265 RICTORQ6R327 1708 aa21.57■■□□□ 1.04
BRD9-212ENST00000495265 MSH6P52701 1360 aa21.57■■□□□ 1.04
BRD9-212ENST00000495265 KIAA2012Q0VF49 1180 aa21.57■■□□□ 1.04
BRD9-212ENST00000495265 RTL1A6NKG5 1358 aa21.57■■□□□ 1.04
BRD9-212ENST00000495265 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
BRD9-212ENST00000495265 PRDM10Q9NQV6 1147 aa21.56■■□□□ 1.04
BRD9-212ENST00000495265 RGS12O14924 1447 aa21.56■■□□□ 1.04
BRD9-212ENST00000495265 MAP2P11137 1827 aaKnown RBP21.56■■□□□ 1.04
BRD9-212ENST00000495265 GDPD2Q9HCC8 539 aa21.56■■□□□ 1.04
BRD9-212ENST00000495265 ARHGEF40Q8TER5 1519 aa21.55■■□□□ 1.04
BRD9-212ENST00000495265 DLG5Q8TDM6 1919 aa21.55■■□□□ 1.04
BRD9-212ENST00000495265 ZNF830Q96NB3 372 aaPredicted RBP21.55■■□□□ 1.04
BRD9-212ENST00000495265 GADD45BO75293 160 aaPredicted RBP21.54■■□□□ 1.04
BRD9-212ENST00000495265 LMOD3Q0VAK6 560 aa21.54■■□□□ 1.04
BRD9-212ENST00000495265 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
BRD9-212ENST00000495265 SMAP1Q8IYB5 467 aaPredicted RBP21.54■■□□□ 1.04
BRD9-212ENST00000495265 TSC1Q92574 1164 aa21.54■■□□□ 1.04
BRD9-212ENST00000495265 DNTTIP2Q5QJE6 756 aaKnown RBP21.54■■□□□ 1.04
BRD9-212ENST00000495265 ZRANB1Q9UGI0 708 aa21.54■■□□□ 1.04
BRD9-212ENST00000495265 PALD1Q9ULE6 856 aa21.53■■□□□ 1.04
BRD9-212ENST00000495265 PDE1AP54750 535 aa21.52■■□□□ 1.04
BRD9-212ENST00000495265 CUL4AQ13619 759 aa21.52■■□□□ 1.04
BRD9-212ENST00000495265 MYRIPQ8NFW9 859 aa21.51■■□□□ 1.03
BRD9-212ENST00000495265 NME9Q86XW9 330 aa21.51■■□□□ 1.03
BRD9-212ENST00000495265 SYAP1Q96A49 352 aaPredicted RBP21.51■■□□□ 1.03
BRD9-212ENST00000495265 C17orf53Q8N3J3 647 aaPredicted RBP21.5■■□□□ 1.03
BRD9-212ENST00000495265 CCDC94Q9BW85 323 aaPredicted RBP21.5■■□□□ 1.03
BRD9-212ENST00000495265 RRS1Q15050 365 aaKnown RBP21.49■■□□□ 1.03
BRD9-212ENST00000495265 MYO5BQ9ULV0 1848 aa21.49■■□□□ 1.03
BRD9-212ENST00000495265 MCM2P49736 904 aa21.49■■□□□ 1.03
BRD9-212ENST00000495265 ESYT1Q9BSJ8 1104 aa21.49■■□□□ 1.03
BRD9-212ENST00000495265 USP25Q9UHP3 1055 aa21.49■■□□□ 1.03
BRD9-212ENST00000495265 USP48Q86UV5 1035 aa21.48■■□□□ 1.03
BRD9-212ENST00000495265 OSBPL3Q9H4L5 887 aa21.48■■□□□ 1.03
BRD9-212ENST00000495265 KIF13AQ9H1H9 1805 aa21.48■■□□□ 1.03
BRD9-212ENST00000495265 TPRNQ4KMQ1 711 aa21.47■■□□□ 1.03
BRD9-212ENST00000495265 TTC12Q9H892 705 aaPredicted RBP21.47■■□□□ 1.03
BRD9-212ENST00000495265 ZNF710Q8N1W2 664 aa21.47■■□□□ 1.03
BRD9-212ENST00000495265 CPSF1Q10570 1443 aaKnown RBP21.47■■□□□ 1.03
BRD9-212ENST00000495265 WAPLQ7Z5K2 1190 aa21.47■■□□□ 1.03
BRD9-212ENST00000495265 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.47■■□□□ 1.03
BRD9-212ENST00000495265 PIBF1Q8WXW3 757 aa21.47■■□□□ 1.03
BRD9-212ENST00000495265 UPF3BQ9BZI7 483 aaKnown RBP21.47■■□□□ 1.03
BRD9-212ENST00000495265 DIP2CQ9Y2E4 1556 aa21.46■■□□□ 1.03
BRD9-212ENST00000495265 NOLC1Q14978 699 aaKnown RBP eCLIP21.46■■□□□ 1.03
BRD9-212ENST00000495265 INTS4Q96HW7 963 aaKnown RBP21.46■■□□□ 1.03
BRD9-212ENST00000495265 ANO2Q9NQ90 1003 aa21.46■■□□□ 1.03
BRD9-212ENST00000495265 CDK12Q9NYV4 1490 aaPredicted RBP21.46■■□□□ 1.03
BRD9-212ENST00000495265 EXOC6BQ9Y2D4 811 aa21.46■■□□□ 1.03
BRD9-212ENST00000495265 FAM177BA6PVY3 158 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms