RNA–Protein interactions for RNA: ENST00000481639.1

PHC3-208, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-208ENST00000481639 FAM9AQ8IZU1 332 aaPredicted RBP9.55□□□□□ -0.88
PHC3-208ENST00000481639 TMPRSS4Q9NRS4 437 aa9.55□□□□□ -0.88
PHC3-208ENST00000481639 TTLL8A6PVC2 850 aa9.54□□□□□ -0.88
PHC3-208ENST00000481639 ERVH48-1M5A8F1 160 aa9.54□□□□□ -0.88
PHC3-208ENST00000481639 RAB15P59190 212 aa9.54□□□□□ -0.88
PHC3-208ENST00000481639 ZNF784Q8NCA9 323 aaPredicted RBP9.54□□□□□ -0.88
PHC3-208ENST00000481639 POLA1P09884 1462 aaPredicted RBP9.53□□□□□ -0.88
PHC3-208ENST00000481639 SOCS7O14512 581 aa9.53□□□□□ -0.88
PHC3-208ENST00000481639 FBXO45P0C2W1 286 aa9.53□□□□□ -0.88
PHC3-208ENST00000481639 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.53□□□□□ -0.883e-6■■■□□ 15.3
PHC3-208ENST00000481639 AGBL1Q96MI9 1066 aa9.53□□□□□ -0.88
PHC3-208ENST00000481639 VSIG8P0DPA2 414 aa9.52□□□□□ -0.89
PHC3-208ENST00000481639 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
PHC3-208ENST00000481639 MTMR14Q8NCE2 650 aa9.52□□□□□ -0.89
PHC3-208ENST00000481639 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
PHC3-208ENST00000481639 KIF21BO75037 1637 aa9.52□□□□□ -0.89
PHC3-208ENST00000481639 LILRA1O75019 489 aa9.51□□□□□ -0.89
PHC3-208ENST00000481639 PPFIA3O75145 1194 aa9.51□□□□□ -0.89
PHC3-208ENST00000481639 MRC2Q9UBG0 1479 aa9.51□□□□□ -0.89
PHC3-208ENST00000481639 WDR62O43379 1518 aa9.51□□□□□ -0.89
PHC3-208ENST00000481639 TARBP1Q13395 1621 aaKnown RBP9.5□□□□□ -0.89
PHC3-208ENST00000481639 ADD1P35611 737 aaKnown RBP9.5□□□□□ -0.89
PHC3-208ENST00000481639 RELBQ01201 579 aa9.5□□□□□ -0.89
PHC3-208ENST00000481639 SNRKQ9NRH2 765 aa9.5□□□□□ -0.89
PHC3-208ENST00000481639 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
PHC3-208ENST00000481639 RAD54L2Q9Y4B4 1467 aa9.49□□□□□ -0.89
PHC3-208ENST00000481639 FIGNL2A6NMB9 653 aa9.49□□□□□ -0.89
PHC3-208ENST00000481639 GPR37L1O60883 481 aa9.49□□□□□ -0.89
PHC3-208ENST00000481639 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
PHC3-208ENST00000481639 ZNF395Q9H8N7 513 aaPredicted RBP9.49□□□□□ -0.89
PHC3-208ENST00000481639 NDUFB9Q9Y6M9 179 aa9.49□□□□□ -0.89
PHC3-208ENST00000481639 ABCA10Q8WWZ4 1543 aa9.49□□□□□ -0.89
PHC3-208ENST00000481639 ADH1AP07327 375 aa9.48□□□□□ -0.89
PHC3-208ENST00000481639 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
PHC3-208ENST00000481639 PTSQ03393 145 aa9.48□□□□□ -0.89
PHC3-208ENST00000481639 NR1H3Q13133 447 aa9.48□□□□□ -0.89
PHC3-208ENST00000481639 INSM2Q96T92 566 aaPredicted RBP9.48□□□□□ -0.89
PHC3-208ENST00000481639 ABCA5Q8WWZ7 1642 aa9.47□□□□□ -0.89
PHC3-208ENST00000481639 LORP23490 312 aaPredicted RBP9.47□□□□□ -0.89
PHC3-208ENST00000481639 KDF1Q8NAX2 398 aaPredicted RBP9.47□□□□□ -0.89
PHC3-208ENST00000481639 TRIM52Q96A61 297 aa9.47□□□□□ -0.89
PHC3-208ENST00000481639 KIF27Q86VH2 1401 aa9.47□□□□□ -0.89
PHC3-208ENST00000481639 APBB1O00213 710 aa9.46□□□□□ -0.9
PHC3-208ENST00000481639 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
PHC3-208ENST00000481639 POLMQ9NP87 494 aaPredicted RBP9.46□□□□□ -0.9
PHC3-208ENST00000481639 CYLDQ9NQC7 956 aa9.46□□□□□ -0.9
PHC3-208ENST00000481639 PRXQ9BXM0 1461 aa9.46□□□□□ -0.9
PHC3-208ENST00000481639 PTGIRP43119 386 aa9.45□□□□□ -0.9
PHC3-208ENST00000481639 CCDC125Q86Z20 511 aa9.45□□□□□ -0.9
PHC3-208ENST00000481639 ZSCAN1Q8NBB4 408 aa9.45□□□□□ -0.9
PHC3-208ENST00000481639 RAPGEF2Q9Y4G8 1499 aa9.45□□□□□ -0.9
PHC3-208ENST00000481639 RNF217Q8TC41 542 aa9.44□□□□□ -0.9
PHC3-208ENST00000481639 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
PHC3-208ENST00000481639 GOLGA3Q08378 1498 aa9.44□□□□□ -0.9
PHC3-208ENST00000481639 ERICH3Q5RHP9 1530 aa9.44□□□□□ -0.9
PHC3-208ENST00000481639 SLC35F4A4IF30 521 aa9.43□□□□□ -0.9
PHC3-208ENST00000481639 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
PHC3-208ENST00000481639 CCDC155Q8N6L0 562 aa9.43□□□□□ -0.9
PHC3-208ENST00000481639 ZNF592Q92610 1267 aa9.43□□□□□ -0.9
PHC3-208ENST00000481639 FOXD4L5Q5VV16 416 aaPredicted RBP9.42□□□□□ -0.9
PHC3-208ENST00000481639 IGF1RP08069 1367 aa9.41□□□□□ -0.9
PHC3-208ENST00000481639 FAM181BA6NEQ2 426 aa9.41□□□□□ -0.9
PHC3-208ENST00000481639 ERVK-9P63128 1117 aa9.41□□□□□ -0.9
PHC3-208ENST00000481639 PBRM1Q86U86 1689 aa9.4□□□□□ -0.9
PHC3-208ENST00000481639 ATP5J2-PTCD1G3V325 749 aa9.4□□□□□ -0.9
PHC3-208ENST00000481639 CC2D2BQ6DHV5 1058 aa9.4□□□□□ -0.9
PHC3-208ENST00000481639 NANOS1Q8WY41 292 aaKnown RBP9.4□□□□□ -0.9
PHC3-208ENST00000481639 TNIKQ9UKE5 1360 aa9.39□□□□□ -0.91
PHC3-208ENST00000481639 PRKCSHP14314 528 aaPredicted RBP9.39□□□□□ -0.91
PHC3-208ENST00000481639 GPR161Q8N6U8 529 aaKnown RBP9.39□□□□□ -0.91
PHC3-208ENST00000481639 TBC1D2BQ9UPU7 963 aa9.39□□□□□ -0.91
PHC3-208ENST00000481639 CUL7Q14999 1698 aa9.39□□□□□ -0.91
PHC3-208ENST00000481639 SENP3-EIF4A1A0A087X0R7 540 aa9.38□□□□□ -0.91
PHC3-208ENST00000481639 RNF144AP50876 292 aaPredicted RBP9.38□□□□□ -0.91
PHC3-208ENST00000481639 GAPVD1Q14C86 1478 aa9.37□□□□□ -0.91
PHC3-208ENST00000481639 IFT140Q96RY7 1462 aa9.37□□□□□ -0.91
PHC3-208ENST00000481639 ITGA6P23229 1130 aa9.37□□□□□ -0.91
PHC3-208ENST00000481639 LYSMD3Q7Z3D4 306 aa9.37□□□□□ -0.91
PHC3-208ENST00000481639 CEP162Q5TB80 1403 aa9.37□□□□□ -0.91
PHC3-208ENST00000481639 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
PHC3-208ENST00000481639 SCTRP47872 440 aa9.36□□□□□ -0.91
PHC3-208ENST00000481639 PRM3Q9NNZ6 103 aa9.36□□□□□ -0.91
PHC3-208ENST00000481639 PCDHB11Q9Y5F2 797 aa9.36□□□□□ -0.91
PHC3-208ENST00000481639 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
PHC3-208ENST00000481639 TDRD9Q8NDG6 1382 aaKnown RBP9.36□□□□□ -0.91
PHC3-208ENST00000481639 A0A1W2PRU2 124 aa9.35□□□□□ -0.91
PHC3-208ENST00000481639 KRT76Q01546 638 aa9.35□□□□□ -0.91
PHC3-208ENST00000481639 CEP126Q9P2H0 1117 aa9.35□□□□□ -0.91
PHC3-208ENST00000481639 GPC1P35052 558 aa9.34□□□□□ -0.91
PHC3-208ENST00000481639 IRF5Q13568 498 aa9.34□□□□□ -0.91
PHC3-208ENST00000481639 CARMIL1Q5VZK9 1371 aa9.34□□□□□ -0.91
PHC3-208ENST00000481639 ADAMTS12P58397 1594 aa9.33□□□□□ -0.92
PHC3-208ENST00000481639 MEN1O00255 615 aa9.33□□□□□ -0.92
PHC3-208ENST00000481639 TRAK2O60296 914 aa9.33□□□□□ -0.92
PHC3-208ENST00000481639 PRICKLE2Q7Z3G6 844 aa9.33□□□□□ -0.92
PHC3-208ENST00000481639 CYP2U1Q7Z449 544 aa9.33□□□□□ -0.92
PHC3-208ENST00000481639 VWA5B2Q8N398 1253 aa9.33□□□□□ -0.92
PHC3-208ENST00000481639 OSBPL3Q9H4L5 887 aa9.33□□□□□ -0.92
PHC3-208ENST00000481639 AQRO60306 1485 aaKnown RBP eCLIP9.33□□□□□ -0.921e-7■■■■■ 32.3
PHC3-208ENST00000481639 RIMBP3CA6NJZ7 1639 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms