RNA–Protein interactions for RNA: ENST00000480566.5

LYRM4-207, Transcript of LYR motif containing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LYRM4, Length 941 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-207ENST00000480566 DDX10Q13206 875 aaKnown RBP13.54□□□□□ -0.24
LYRM4-207ENST00000480566 TERF2IPQ9NYB0 399 aa13.54□□□□□ -0.24
LYRM4-207ENST00000480566 FOXO3O43524 673 aa13.53□□□□□ -0.24
LYRM4-207ENST00000480566 TOM1O60784 492 aa13.53□□□□□ -0.24
LYRM4-207ENST00000480566 PPP1R15BQ5SWA1 713 aa13.53□□□□□ -0.24
LYRM4-207ENST00000480566 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
LYRM4-207ENST00000480566 DDX17Q92841 729 aaKnown RBP13.53□□□□□ -0.24
LYRM4-207ENST00000480566 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
LYRM4-207ENST00000480566 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.25
LYRM4-207ENST00000480566 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
LYRM4-207ENST00000480566 PHLPP1O60346 1717 aa13.52□□□□□ -0.25
LYRM4-207ENST00000480566 CRYBG1Q9Y4K1 1723 aa13.51□□□□□ -0.25
LYRM4-207ENST00000480566 MED1Q15648 1581 aaPredicted RBP13.51□□□□□ -0.25
LYRM4-207ENST00000480566 TNS3Q68CZ2 1445 aa13.51□□□□□ -0.25
LYRM4-207ENST00000480566 BRD4O60885 1362 aaPredicted RBP13.51□□□□□ -0.25
LYRM4-207ENST00000480566 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
LYRM4-207ENST00000480566 PER1O15534 1290 aaPredicted RBP13.51□□□□□ -0.25
LYRM4-207ENST00000480566 PIP4K2BP78356 416 aa13.51□□□□□ -0.25
LYRM4-207ENST00000480566 XPCQ01831 940 aaPredicted RBP13.51□□□□□ -0.25
LYRM4-207ENST00000480566 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
LYRM4-207ENST00000480566 OVOS2A0A0J9YW53 1432 aa13.5□□□□□ -0.25
LYRM4-207ENST00000480566 OVOS2Q6IE36 1432 aa13.5□□□□□ -0.25
LYRM4-207ENST00000480566 SBNO1A3KN83 1393 aa13.5□□□□□ -0.25
LYRM4-207ENST00000480566 PSDA5PKW4 1024 aaPredicted RBP13.5□□□□□ -0.25
LYRM4-207ENST00000480566 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
LYRM4-207ENST00000480566 ABCA3Q99758 1704 aa13.49□□□□□ -0.25
LYRM4-207ENST00000480566 NPC1L1Q9UHC9 1359 aa13.48□□□□□ -0.25
LYRM4-207ENST00000480566 TTC21AQ8NDW8 1320 aa13.48□□□□□ -0.25
LYRM4-207ENST00000480566 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
LYRM4-207ENST00000480566 UPF1Q92900 1129 aaKnown RBP eCLIP13.48□□□□□ -0.25
LYRM4-207ENST00000480566 NSD2O96028 1365 aa13.47□□□□□ -0.25
LYRM4-207ENST00000480566 COL22A1Q8NFW1 1626 aaPredicted RBP13.47□□□□□ -0.25
LYRM4-207ENST00000480566 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
LYRM4-207ENST00000480566 PBX2P40425 430 aa13.47□□□□□ -0.25
LYRM4-207ENST00000480566 PSME1Q06323 249 aa13.47□□□□□ -0.25
LYRM4-207ENST00000480566 KRT28Q7Z3Y7 464 aa13.47□□□□□ -0.25
LYRM4-207ENST00000480566 NME9Q86XW9 330 aa13.47□□□□□ -0.25
LYRM4-207ENST00000480566 LARP6Q9BRS8 491 aaKnown RBP13.47□□□□□ -0.25
LYRM4-207ENST00000480566 SLIT3O75094 1523 aa13.47□□□□□ -0.25
LYRM4-207ENST00000480566 USP31Q70CQ4 1352 aa13.46□□□□□ -0.25
LYRM4-207ENST00000480566 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.25
LYRM4-207ENST00000480566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.46□□□□□ -0.25
LYRM4-207ENST00000480566 DDX27Q96GQ7 796 aaKnown RBP13.46□□□□□ -0.25
LYRM4-207ENST00000480566 SPATA31A3Q5VYP0 1347 aa13.45□□□□□ -0.26
LYRM4-207ENST00000480566 KNSTRNQ9Y448 316 aa13.45□□□□□ -0.26
LYRM4-207ENST00000480566 NFAT5O94916 1531 aa13.44□□□□□ -0.26
LYRM4-207ENST00000480566 SHPRHQ149N8 1683 aa13.44□□□□□ -0.26
LYRM4-207ENST00000480566 FYB1O15117 783 aa13.44□□□□□ -0.26
LYRM4-207ENST00000480566 ANKRD13DQ6ZTN6 518 aa13.44□□□□□ -0.26
LYRM4-207ENST00000480566 OXER1Q8TDS5 423 aa13.44□□□□□ -0.26
LYRM4-207ENST00000480566 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
LYRM4-207ENST00000480566 PNPLA6Q8IY17 1366 aa13.44□□□□□ -0.26
LYRM4-207ENST00000480566 PARD3Q8TEW0 1356 aa13.44□□□□□ -0.26
LYRM4-207ENST00000480566 USP19O94966 1318 aa13.43□□□□□ -0.26
LYRM4-207ENST00000480566 LSM11P83369 360 aaKnown RBP eCLIP13.42□□□□□ -0.26
LYRM4-207ENST00000480566 GGNBP2Q9H3C7 697 aa13.42□□□□□ -0.26
LYRM4-207ENST00000480566 CC2D1BQ5T0F9 858 aaKnown RBP13.41□□□□□ -0.26
LYRM4-207ENST00000480566 HSPA1LP34931 641 aa13.4□□□□□ -0.26
LYRM4-207ENST00000480566 PTGER2P43116 358 aa13.4□□□□□ -0.26
LYRM4-207ENST00000480566 PPP4R3BQ5MIZ7 849 aa13.4□□□□□ -0.26
LYRM4-207ENST00000480566 NUTM2GQ5VZR2 741 aa13.4□□□□□ -0.26
LYRM4-207ENST00000480566 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
LYRM4-207ENST00000480566 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
LYRM4-207ENST00000480566 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
LYRM4-207ENST00000480566 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
LYRM4-207ENST00000480566 MFSD10Q14728 455 aa13.39□□□□□ -0.27
LYRM4-207ENST00000480566 AXIN2Q9Y2T1 843 aa13.39□□□□□ -0.27
LYRM4-207ENST00000480566 RNF166Q96A37 237 aaPredicted RBP13.38□□□□□ -0.27
LYRM4-207ENST00000480566 PEAK1Q9H792 1746 aa13.38□□□□□ -0.27
LYRM4-207ENST00000480566 CNGB1Q14028 1251 aaPredicted RBP13.37□□□□□ -0.27
LYRM4-207ENST00000480566 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
LYRM4-207ENST00000480566 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
LYRM4-207ENST00000480566 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
LYRM4-207ENST00000480566 COG3Q96JB2 828 aa13.37□□□□□ -0.27
LYRM4-207ENST00000480566 PRKRIP1Q9H875 184 aaPredicted RBP13.37□□□□□ -0.27
LYRM4-207ENST00000480566 LRP6O75581 1613 aa13.36□□□□□ -0.27
LYRM4-207ENST00000480566 AATKQ6ZMQ8 1374 aa13.36□□□□□ -0.27
LYRM4-207ENST00000480566 JCADQ9P266 1359 aa13.36□□□□□ -0.27
LYRM4-207ENST00000480566 LTN1O94822 1766 aa13.36□□□□□ -0.27
LYRM4-207ENST00000480566 NLRP13Q86W25 1043 aa13.36□□□□□ -0.27
LYRM4-207ENST00000480566 ARHGAP33O14559 1287 aa13.35□□□□□ -0.27
LYRM4-207ENST00000480566 POTEEQ6S8J3 1075 aa13.35□□□□□ -0.27
LYRM4-207ENST00000480566 MORC1Q86VD1 984 aa13.35□□□□□ -0.27
LYRM4-207ENST00000480566 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
LYRM4-207ENST00000480566 CDK12Q9NYV4 1490 aaPredicted RBP13.35□□□□□ -0.27
LYRM4-207ENST00000480566 LMO7Q8WWI1 1683 aa13.34□□□□□ -0.27
LYRM4-207ENST00000480566 ABCC6O95255 1503 aa13.34□□□□□ -0.27
LYRM4-207ENST00000480566 SPRYD3Q8NCJ5 442 aa13.34□□□□□ -0.27
LYRM4-207ENST00000480566 COL3A1P02461 1466 aaPredicted RBP13.34□□□□□ -0.27
LYRM4-207ENST00000480566 CPDO75976 1380 aa13.33□□□□□ -0.27
LYRM4-207ENST00000480566 COL18A1P39060 1754 aa13.33□□□□□ -0.28
LYRM4-207ENST00000480566 FBLN1P23142 703 aa13.33□□□□□ -0.28
LYRM4-207ENST00000480566 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
LYRM4-207ENST00000480566 RALBP1Q15311 655 aa13.33□□□□□ -0.28
LYRM4-207ENST00000480566 ANP32CO43423 234 aa13.32□□□□□ -0.28
LYRM4-207ENST00000480566 GCP02774 474 aa13.32□□□□□ -0.28
LYRM4-207ENST00000480566 PPP2R1AP30153 589 aa13.32□□□□□ -0.28
LYRM4-207ENST00000480566 MAP3K19Q56UN5 1328 aa13.32□□□□□ -0.28
LYRM4-207ENST00000480566 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
LYRM4-207ENST00000480566 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms