RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 CCDC125Q86Z20 511 aa8.85□□□□□ -0.99
AFF4-208ENST00000478588 ADAMTS19Q8TE59 1207 aa8.85□□□□□ -0.99
AFF4-208ENST00000478588 POLMQ9NP87 494 aaPredicted RBP8.85□□□□□ -0.99
AFF4-208ENST00000478588 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
AFF4-208ENST00000478588 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
AFF4-208ENST00000478588 A0A1W2PRU2 124 aa8.83□□□□□ -1
AFF4-208ENST00000478588 TRAK2O60296 914 aa8.83□□□□□ -1
AFF4-208ENST00000478588 WWC1Q8IX03 1113 aa8.83□□□□□ -1
AFF4-208ENST00000478588 FNBP4Q8N3X1 1017 aaPredicted RBP8.83□□□□□ -1
AFF4-208ENST00000478588 CHIC2Q9UKJ5 165 aa8.83□□□□□ -1
AFF4-208ENST00000478588 DOLKQ9UPQ8 538 aa8.83□□□□□ -1
AFF4-208ENST00000478588 WFS1O76024 890 aa8.82□□□□□ -1
AFF4-208ENST00000478588 STAU1O95793 577 aaKnown RBP8.82□□□□□ -1
AFF4-208ENST00000478588 SOX11P35716 441 aa8.82□□□□□ -1
AFF4-208ENST00000478588 OXLD1Q5BKU9 147 aa8.82□□□□□ -1
AFF4-208ENST00000478588 FOXD4L5Q5VV16 416 aaPredicted RBP8.82□□□□□ -1
AFF4-208ENST00000478588 RAB6BQ9NRW1 208 aa8.82□□□□□ -1
AFF4-208ENST00000478588 MEN1O00255 615 aa8.81□□□□□ -1
AFF4-208ENST00000478588 HDGFL1Q5TGJ6 251 aa8.81□□□□□ -1
AFF4-208ENST00000478588 PLPP7Q8NBV4 271 aa8.81□□□□□ -1
AFF4-208ENST00000478588 RNF217Q8TC41 542 aa8.81□□□□□ -1
AFF4-208ENST00000478588 ESF1Q9H501 851 aaKnown RBP8.81□□□□□ -1
AFF4-208ENST00000478588 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.8□□□□□ -1
AFF4-208ENST00000478588 PROSER2Q86WR7 435 aaPredicted RBP8.8□□□□□ -1
AFF4-208ENST00000478588 ARHGEF10LQ9HCE6 1279 aa8.8□□□□□ -1
AFF4-208ENST00000478588 MYCP01106 439 aaPredicted RBP8.79□□□□□ -1
AFF4-208ENST00000478588 PTSQ03393 145 aa8.79□□□□□ -1
AFF4-208ENST00000478588 USP4Q13107 963 aa8.79□□□□□ -1
AFF4-208ENST00000478588 CYP2U1Q7Z449 544 aa8.79□□□□□ -1
AFF4-208ENST00000478588 TRIM52Q96A61 297 aa8.79□□□□□ -1
AFF4-208ENST00000478588 SKIP12755 728 aa8.78□□□□□ -1
AFF4-208ENST00000478588 RNF144AP50876 292 aaPredicted RBP8.78□□□□□ -1
AFF4-208ENST00000478588 PRICKLE2Q7Z3G6 844 aa8.78□□□□□ -1
AFF4-208ENST00000478588 A6NJR5 290 aa8.77□□□□□ -1.01
AFF4-208ENST00000478588 PPFIA3O75145 1194 aa8.77□□□□□ -1.01
AFF4-208ENST00000478588 ERBB4Q15303 1308 aa8.77□□□□□ -1.01
AFF4-208ENST00000478588 H3BM21 787 aa8.76□□□□□ -1.01
AFF4-208ENST00000478588 IL2RAP01589 272 aa8.76□□□□□ -1.01
AFF4-208ENST00000478588 RHOQP17081 205 aa8.76□□□□□ -1.01
AFF4-208ENST00000478588 CLN3Q13286 438 aa8.76□□□□□ -1.01
AFF4-208ENST00000478588 MAP7D1Q3KQU3 841 aa8.76□□□□□ -1.01
AFF4-208ENST00000478588 NLRP3Q96P20 1036 aa8.76□□□□□ -1.01
AFF4-208ENST00000478588 SLC35F4A4IF30 521 aa8.75□□□□□ -1.01
AFF4-208ENST00000478588 GNRH1P01148 92 aa8.75□□□□□ -1.01
AFF4-208ENST00000478588 TBC1D9Q6ZT07 1266 aa8.75□□□□□ -1.01
AFF4-208ENST00000478588 LYSMD3Q7Z3D4 306 aa8.75□□□□□ -1.01
AFF4-208ENST00000478588 DEPDC4Q8N2C3 294 aa8.75□□□□□ -1.01
AFF4-208ENST00000478588 SLC16A10Q8TF71 515 aa8.75□□□□□ -1.01
AFF4-208ENST00000478588 CNKSR1Q969H4 720 aa8.75□□□□□ -1.01
AFF4-208ENST00000478588 UCN2Q96RP3 112 aa8.75□□□□□ -1.01
AFF4-208ENST00000478588 SENP3-EIF4A1A0A087X0R7 540 aa8.74□□□□□ -1.01
AFF4-208ENST00000478588 POU4F2Q12837 409 aa8.74□□□□□ -1.01
AFF4-208ENST00000478588 NPAS3Q8IXF0 933 aa8.74□□□□□ -1.01
AFF4-208ENST00000478588 CCDC155Q8N6L0 562 aa8.74□□□□□ -1.01
AFF4-208ENST00000478588 GRIP2Q9C0E4 1043 aa8.74□□□□□ -1.01
AFF4-208ENST00000478588 CENPCQ03188 943 aa8.73□□□□□ -1.01
AFF4-208ENST00000478588 SLC27A3Q5K4L6 730 aa8.73□□□□□ -1.01
AFF4-208ENST00000478588 GLMNQ92990 594 aa8.73□□□□□ -1.01
AFF4-208ENST00000478588 XAGE2Q96GT9 111 aa8.73□□□□□ -1.01
AFF4-208ENST00000478588 ESYT1Q9BSJ8 1104 aa8.73□□□□□ -1.01
AFF4-208ENST00000478588 ETNK1Q9HBU6 452 aa8.73□□□□□ -1.01
AFF4-208ENST00000478588 HRH3Q9Y5N1 445 aa8.73□□□□□ -1.01
AFF4-208ENST00000478588 GTF3C3Q9Y5Q9 886 aa8.73□□□□□ -1.01
AFF4-208ENST00000478588 GPC1P35052 558 aa8.72□□□□□ -1.01
AFF4-208ENST00000478588 GMPRP36959 345 aa8.72□□□□□ -1.01
AFF4-208ENST00000478588 NCOA4Q13772 614 aa8.72□□□□□ -1.01
AFF4-208ENST00000478588 SIRT1Q96EB6 747 aa8.72□□□□□ -1.01
AFF4-208ENST00000478588 ZNF777Q9ULD5 760 aaPredicted RBP8.72□□□□□ -1.01
AFF4-208ENST00000478588 SCNN1DP51172 638 aa8.71□□□□□ -1.02
AFF4-208ENST00000478588 NFATC2IPQ8NCF5 419 aa8.71□□□□□ -1.02
AFF4-208ENST00000478588 IRF7Q92985 503 aa8.71□□□□□ -1.02
AFF4-208ENST00000478588 PCDHGA11Q9Y5H2 935 aa8.71□□□□□ -1.02
AFF4-208ENST00000478588 USP17L5A8MUK1 530 aa8.7□□□□□ -1.02
AFF4-208ENST00000478588 EML3Q32P44 896 aa8.7□□□□□ -1.02
AFF4-208ENST00000478588 GPR161Q8N6U8 529 aaKnown RBP8.7□□□□□ -1.02
AFF4-208ENST00000478588 GDF10P55107 478 aa8.69□□□□□ -1.02
AFF4-208ENST00000478588 FHDC1Q9C0D6 1143 aaPredicted RBP8.69□□□□□ -1.02
AFF4-208ENST00000478588 CUEDC1Q9NWM3 386 aaPredicted RBP8.69□□□□□ -1.02
AFF4-208ENST00000478588 TFIP11Q9UBB9 837 aaKnown RBP8.69□□□□□ -1.02
AFF4-208ENST00000478588 TMEM229AB2RXF0 380 aa8.68□□□□□ -1.02
AFF4-208ENST00000478588 ATP9BO43861 1147 aa8.68□□□□□ -1.02
AFF4-208ENST00000478588 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
AFF4-208ENST00000478588 CALR3Q96L12 384 aaKnown RBP8.68□□□□□ -1.02
AFF4-208ENST00000478588 SERTAD1Q9UHV2 236 aa8.68□□□□□ -1.02
AFF4-208ENST00000478588 NOD1Q9Y239 953 aa8.68□□□□□ -1.02
AFF4-208ENST00000478588 USP17L3A6NCW0 530 aa8.67□□□□□ -1.02
AFF4-208ENST00000478588 USP17L4A6NCW7 530 aa8.67□□□□□ -1.02
AFF4-208ENST00000478588 INHAP05111 366 aa8.67□□□□□ -1.02
AFF4-208ENST00000478588 ITGA6P23229 1130 aa8.67□□□□□ -1.02
AFF4-208ENST00000478588 PHKA2P46019 1235 aa8.67□□□□□ -1.02
AFF4-208ENST00000478588 GTF2IP78347 998 aa8.67□□□□□ -1.02
AFF4-208ENST00000478588 NBPF10Q6P3W6 841 aaKnown RBP8.67□□□□□ -1.02
AFF4-208ENST00000478588 USP17L2Q6R6M4 530 aa8.67□□□□□ -1.02
AFF4-208ENST00000478588 USP17L1Q7RTZ2 530 aa8.67□□□□□ -1.02
AFF4-208ENST00000478588 VWA5B2Q8N398 1253 aa8.67□□□□□ -1.02
AFF4-208ENST00000478588 NBPF15Q8N660 670 aa8.67□□□□□ -1.02
AFF4-208ENST00000478588 ZSCAN10Q96SZ4 725 aaPredicted RBP8.67□□□□□ -1.02
AFF4-208ENST00000478588 SPATA31C2B4DYI2 1134 aa8.66□□□□□ -1.02
AFF4-208ENST00000478588 WIPF1O43516 503 aa8.66□□□□□ -1.02
AFF4-208ENST00000478588 LZTS3O60299 673 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms