RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 CAMSAP1Q5T5Y3 1602 aa16.37■□□□□ 0.21
DFFB-209ENST00000477548 MED14O60244 1454 aa16.36■□□□□ 0.21
DFFB-209ENST00000477548 CASC1Q6TDU7 716 aa16.36■□□□□ 0.21
DFFB-209ENST00000477548 PIBF1Q8WXW3 757 aa16.36■□□□□ 0.21
DFFB-209ENST00000477548 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
DFFB-209ENST00000477548 FAM177BA6PVY3 158 aa16.36■□□□□ 0.21
DFFB-209ENST00000477548 TTC22Q5TAA0 569 aa16.36■□□□□ 0.21
DFFB-209ENST00000477548 PLCD3Q8N3E9 789 aa16.36■□□□□ 0.21
DFFB-209ENST00000477548 KIF20AO95235 890 aa16.35■□□□□ 0.21
DFFB-209ENST00000477548 NEURL4Q96JN8 1562 aa16.34■□□□□ 0.21
DFFB-209ENST00000477548 GTF2F1P35269 517 aaKnown RBP eCLIP16.34■□□□□ 0.21
DFFB-209ENST00000477548 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
DFFB-209ENST00000477548 SECISBP2LQ93073 1101 aaKnown RBP16.34■□□□□ 0.21
DFFB-209ENST00000477548 NSD2O96028 1365 aa16.34■□□□□ 0.21
DFFB-209ENST00000477548 PPLO60437 1756 aa16.34■□□□□ 0.21
DFFB-209ENST00000477548 MYO3AQ8NEV4 1616 aa16.34■□□□□ 0.21
DFFB-209ENST00000477548 ADGRB1O14514 1584 aa16.33■□□□□ 0.21
DFFB-209ENST00000477548 REREQ9P2R6 1566 aa16.33■□□□□ 0.21
DFFB-209ENST00000477548 LETM1O95202 739 aaPredicted RBP16.33■□□□□ 0.21
DFFB-209ENST00000477548 C17orf53Q8N3J3 647 aaPredicted RBP16.33■□□□□ 0.21
DFFB-209ENST00000477548 PHF14O94880 888 aa16.33■□□□□ 0.2
DFFB-209ENST00000477548 C16orf71Q8IYS4 520 aaPredicted RBP16.33■□□□□ 0.2
DFFB-209ENST00000477548 ZNF428Q96B54 188 aa16.33■□□□□ 0.2
DFFB-209ENST00000477548 TTC12Q9H892 705 aaPredicted RBP16.33■□□□□ 0.2
DFFB-209ENST00000477548 USP32Q8NFA0 1604 aa16.32■□□□□ 0.2
DFFB-209ENST00000477548 MRPL50Q8N5N7 158 aaKnown RBP16.32■□□□□ 0.2
DFFB-209ENST00000477548 USP25Q9UHP3 1055 aa16.32■□□□□ 0.2
DFFB-209ENST00000477548 SPDYE4A6NLX3 237 aa16.32■□□□□ 0.2
DFFB-209ENST00000477548 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
DFFB-209ENST00000477548 ARHGAP45Q92619 1136 aa16.32■□□□□ 0.2
DFFB-209ENST00000477548 REC8O95072 547 aa16.31■□□□□ 0.2
DFFB-209ENST00000477548 PDCL2Q8N4E4 241 aa16.31■□□□□ 0.2
DFFB-209ENST00000477548 CABP2Q9NPB3 220 aa16.31■□□□□ 0.2
DFFB-209ENST00000477548 ANKRD36BQ8N2N9 1353 aa16.31■□□□□ 0.2
DFFB-209ENST00000477548 ELL2O00472 640 aaPredicted RBP16.31■□□□□ 0.2
DFFB-209ENST00000477548 FOXD4L6Q3SYB3 417 aaPredicted RBP16.31■□□□□ 0.2
DFFB-209ENST00000477548 FOXD4L3Q6VB84 417 aaPredicted RBP16.31■□□□□ 0.2
DFFB-209ENST00000477548 GGNBP2Q9H3C7 697 aa16.31■□□□□ 0.2
DFFB-209ENST00000477548 BCL2L12Q9HB09 334 aa16.31■□□□□ 0.2
DFFB-209ENST00000477548 SDSP20132 328 aa16.3■□□□□ 0.2
DFFB-209ENST00000477548 NEK4P51957 841 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 FAM184AQ8NB25 1140 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 NEXMIFQ5QGS0 1516 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 VGFO15240 615 aaPredicted RBP16.29■□□□□ 0.2
DFFB-209ENST00000477548 VAMP4O75379 141 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 ADCY5O95622 1261 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 TMX3Q96JJ7 454 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 EVC2Q86UK5 1308 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 MYO5BQ9ULV0 1848 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 APBB1O00213 710 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 BRD1O95696 1058 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 FKBP5Q13451 457 aaPredicted RBP16.29■□□□□ 0.2
DFFB-209ENST00000477548 UVSSAQ2YD98 709 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 OTUD7AQ8TE49 926 aaPredicted RBP16.29■□□□□ 0.2
DFFB-209ENST00000477548 DCTPP1Q9H773 170 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
DFFB-209ENST00000477548 DIP2BQ9P265 1576 aa16.28■□□□□ 0.2
DFFB-209ENST00000477548 DIAPH1O60610 1272 aaKnown RBP16.28■□□□□ 0.2
DFFB-209ENST00000477548 CHAF1AQ13111 956 aaPredicted RBP16.28■□□□□ 0.2
DFFB-209ENST00000477548 PTCH1Q13635 1447 aa16.28■□□□□ 0.2
DFFB-209ENST00000477548 ABCC4O15439 1325 aa16.28■□□□□ 0.2
DFFB-209ENST00000477548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.28■□□□□ 0.2
DFFB-209ENST00000477548 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
DFFB-209ENST00000477548 QRICH2Q9H0J4 1663 aa16.27■□□□□ 0.2
DFFB-209ENST00000477548 PIK3C2BO00750 1634 aa16.27■□□□□ 0.2
DFFB-209ENST00000477548 GDPD2Q9HCC8 539 aa16.27■□□□□ 0.2
DFFB-209ENST00000477548 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.2
DFFB-209ENST00000477548 ATAD2Q6PL18 1390 aa16.26■□□□□ 0.19
DFFB-209ENST00000477548 ERC2O15083 957 aa16.26■□□□□ 0.19
DFFB-209ENST00000477548 PLCB2Q00722 1185 aa16.26■□□□□ 0.19
DFFB-209ENST00000477548 NOL8Q76FK4 1167 aaKnown RBP16.26■□□□□ 0.19
DFFB-209ENST00000477548 SPTLC3Q9NUV7 552 aa16.26■□□□□ 0.19
DFFB-209ENST00000477548 GADD45BO75293 160 aaPredicted RBP16.26■□□□□ 0.19
DFFB-209ENST00000477548 TPRNQ4KMQ1 711 aa16.26■□□□□ 0.19
DFFB-209ENST00000477548 DIAPH3Q9NSV4 1193 aa16.26■□□□□ 0.19
DFFB-209ENST00000477548 THUMPD2Q9BTF0 503 aaKnown RBP16.25■□□□□ 0.19
DFFB-209ENST00000477548 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
DFFB-209ENST00000477548 SETBP1Q9Y6X0 1596 aa16.25■□□□□ 0.19
DFFB-209ENST00000477548 IGSF3O75054 1194 aa16.25■□□□□ 0.19
DFFB-209ENST00000477548 GLI2P10070 1586 aa16.25■□□□□ 0.19
DFFB-209ENST00000477548 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.19
DFFB-209ENST00000477548 MINK1Q8N4C8 1332 aaPredicted RBP16.25■□□□□ 0.19
DFFB-209ENST00000477548 SMARCA5O60264 1052 aaPredicted RBP16.24■□□□□ 0.19
DFFB-209ENST00000477548 MCM2P49736 904 aa16.24■□□□□ 0.19
DFFB-209ENST00000477548 SLC52A1Q9NWF4 448 aa16.24■□□□□ 0.19
DFFB-209ENST00000477548 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
DFFB-209ENST00000477548 COL3A1P02461 1466 aaPredicted RBP16.24■□□□□ 0.19
DFFB-209ENST00000477548 HCLS1P14317 486 aaPredicted RBP16.23■□□□□ 0.19
DFFB-209ENST00000477548 USP48Q86UV5 1035 aa16.23■□□□□ 0.19
DFFB-209ENST00000477548 TEX2Q8IWB9 1127 aa16.23■□□□□ 0.19
DFFB-209ENST00000477548 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
DFFB-209ENST00000477548 RIOK3O14730 519 aaKnown RBP16.23■□□□□ 0.19
DFFB-209ENST00000477548 FCHSD2O94868 740 aa16.22■□□□□ 0.19
DFFB-209ENST00000477548 TWISTNBQ3B726 338 aaPredicted RBP16.22■□□□□ 0.19
DFFB-209ENST00000477548 ZNF771Q7L3S4 317 aaPredicted RBP16.22■□□□□ 0.19
DFFB-209ENST00000477548 PRAM1Q96QH2 718 aa16.22■□□□□ 0.19
DFFB-209ENST00000477548 ZC3H13Q5T200 1668 aaKnown RBP16.22■□□□□ 0.19
DFFB-209ENST00000477548 TULP4Q9NRJ4 1543 aa16.22■□□□□ 0.19
DFFB-209ENST00000477548 CCDC183Q5T5S1 534 aa16.22■□□□□ 0.19
DFFB-209ENST00000477548 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms