RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 CUEDC1Q9NWM3 386 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-215ENST00000476664 TMA7Q9Y2S6 64 aaKnown RBP9.75□□□□□ -0.85
LRCH3-215ENST00000476664 FRMPD1Q5SYB0 1578 aa9.75□□□□□ -0.85
LRCH3-215ENST00000476664 UHRF1BP1Q6BDS2 1440 aa9.74□□□□□ -0.85
LRCH3-215ENST00000476664 CARMIL2Q6F5E8 1435 aa9.74□□□□□ -0.85
LRCH3-215ENST00000476664 SIGLEC1Q9BZZ2 1709 aa9.74□□□□□ -0.85
LRCH3-215ENST00000476664 ARHGEF40Q8TER5 1519 aa9.74□□□□□ -0.85
LRCH3-215ENST00000476664 PER1O15534 1290 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-215ENST00000476664 MCCD1P59942 119 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-215ENST00000476664 HDLBPQ00341 1268 aaKnown RBP9.74□□□□□ -0.85
LRCH3-215ENST00000476664 ZNF211Q13398 564 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-215ENST00000476664 EML3Q32P44 896 aa9.74□□□□□ -0.85
LRCH3-215ENST00000476664 TAS1R3Q7RTX0 852 aa9.74□□□□□ -0.85
LRCH3-215ENST00000476664 OGFOD1Q8N543 542 aa9.74□□□□□ -0.85
LRCH3-215ENST00000476664 ZNF335Q9H4Z2 1342 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-215ENST00000476664 SETD1BQ9UPS6 1966 aaKnown RBP9.74□□□□□ -0.85
LRCH3-215ENST00000476664 POGZQ7Z3K3 1410 aa9.73□□□□□ -0.85
LRCH3-215ENST00000476664 SCNN1AP37088 669 aa9.73□□□□□ -0.85
LRCH3-215ENST00000476664 DESI1Q6ICB0 168 aa9.73□□□□□ -0.85
LRCH3-215ENST00000476664 RGL4Q8IZJ4 473 aa9.73□□□□□ -0.85
LRCH3-215ENST00000476664 FANCAO15360 1455 aa9.72□□□□□ -0.85
LRCH3-215ENST00000476664 TRIM6-TRIM34B2RNG4 842 aa9.72□□□□□ -0.85
LRCH3-215ENST00000476664 PPP1R3GB7ZBB8 358 aa9.72□□□□□ -0.85
LRCH3-215ENST00000476664 COL9A1P20849 921 aa9.72□□□□□ -0.85
LRCH3-215ENST00000476664 CEBPAP49715 358 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-215ENST00000476664 MRPL58Q14197 206 aaKnown RBP9.72□□□□□ -0.85
LRCH3-215ENST00000476664 PLPP7Q8NBV4 271 aa9.72□□□□□ -0.85
LRCH3-215ENST00000476664 CXXC1Q9P0U4 656 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-215ENST00000476664 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
LRCH3-215ENST00000476664 PRMT3O60678 531 aa9.71□□□□□ -0.86
LRCH3-215ENST00000476664 FGD1P98174 961 aa9.71□□□□□ -0.86
LRCH3-215ENST00000476664 SF3B2Q13435 895 aaKnown RBP9.71□□□□□ -0.86
LRCH3-215ENST00000476664 MLECQ14165 292 aa9.71□□□□□ -0.86
LRCH3-215ENST00000476664 MAP7D1Q3KQU3 841 aa9.71□□□□□ -0.86
LRCH3-215ENST00000476664 POTEAQ6S8J7 498 aa9.71□□□□□ -0.86
LRCH3-215ENST00000476664 DNAAF2Q9NVR5 837 aaKnown RBP9.71□□□□□ -0.86
LRCH3-215ENST00000476664 FKBPLQ9UIM3 349 aa9.71□□□□□ -0.86
LRCH3-215ENST00000476664 RBM19Q9Y4C8 960 aaKnown RBP9.71□□□□□ -0.86
LRCH3-215ENST00000476664 RETREG3Q86VR2 466 aa9.7□□□□□ -0.86
LRCH3-215ENST00000476664 LARGE2Q8N3Y3 721 aa9.7□□□□□ -0.86
LRCH3-215ENST00000476664 ZNF594Q96JF6 807 aaPredicted RBP9.7□□□□□ -0.86
LRCH3-215ENST00000476664 ANO2Q9NQ90 1003 aa9.7□□□□□ -0.86
LRCH3-215ENST00000476664 CEP126Q9P2H0 1117 aa9.7□□□□□ -0.86
LRCH3-215ENST00000476664 PHLDB1Q86UU1 1377 aa9.7□□□□□ -0.86
LRCH3-215ENST00000476664 SLC10A3P09131 477 aa9.69□□□□□ -0.86
LRCH3-215ENST00000476664 BRD2P25440 801 aaKnown RBP9.69□□□□□ -0.86
LRCH3-215ENST00000476664 SLC4A3P48751 1232 aa9.69□□□□□ -0.86
LRCH3-215ENST00000476664 SLC43A3Q8NBI5 491 aa9.69□□□□□ -0.86
LRCH3-215ENST00000476664 ARMC5Q96C12 935 aa9.69□□□□□ -0.86
LRCH3-215ENST00000476664 DNAJC2Q99543 621 aaKnown RBP9.69□□□□□ -0.86
LRCH3-215ENST00000476664 LNPKQ9C0E8 428 aa9.69□□□□□ -0.86
LRCH3-215ENST00000476664 NLRP2Q9NX02 1062 aa9.69□□□□□ -0.86
LRCH3-215ENST00000476664 BRPF3Q9ULD4 1205 aa9.69□□□□□ -0.86
LRCH3-215ENST00000476664 NCOA1Q15788 1441 aa9.68□□□□□ -0.86
LRCH3-215ENST00000476664 ATP2B1P20020 1258 aa9.68□□□□□ -0.86
LRCH3-215ENST00000476664 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
LRCH3-215ENST00000476664 IFFO2Q5TF58 517 aa9.68□□□□□ -0.86
LRCH3-215ENST00000476664 NOD1Q9Y239 953 aa9.68□□□□□ -0.86
LRCH3-215ENST00000476664 TOM1O60784 492 aa9.67□□□□□ -0.86
LRCH3-215ENST00000476664 OCLNQ16625 522 aa9.67□□□□□ -0.86
LRCH3-215ENST00000476664 C9orf131Q5VYM1 1079 aa9.67□□□□□ -0.86
LRCH3-215ENST00000476664 LYPD8Q6UX82 237 aa9.67□□□□□ -0.86
LRCH3-215ENST00000476664 NOL8Q76FK4 1167 aaKnown RBP9.67□□□□□ -0.86
LRCH3-215ENST00000476664 DHX37Q8IY37 1157 aaKnown RBP9.67□□□□□ -0.86
LRCH3-215ENST00000476664 SIX5Q8N196 739 aa9.67□□□□□ -0.86
LRCH3-215ENST00000476664 GTF3C2Q8WUA4 911 aaPredicted RBP9.67□□□□□ -0.86
LRCH3-215ENST00000476664 BCL2L12Q9HB09 334 aa9.67□□□□□ -0.86
LRCH3-215ENST00000476664 PRKAG2Q9UGJ0 569 aa9.67□□□□□ -0.86
LRCH3-215ENST00000476664 TLDC2A0PJX2 215 aa9.66□□□□□ -0.86
LRCH3-215ENST00000476664 PTPREP23469 700 aa9.66□□□□□ -0.86
LRCH3-215ENST00000476664 SEC13P55735 322 aa9.66□□□□□ -0.86
LRCH3-215ENST00000476664 CLDN10P78369 228 aa9.66□□□□□ -0.86
LRCH3-215ENST00000476664 RAD51AP2Q09MP3 1159 aa9.66□□□□□ -0.86
LRCH3-215ENST00000476664 FUT2Q10981 343 aa9.66□□□□□ -0.86
LRCH3-215ENST00000476664 PPP4R3BQ5MIZ7 849 aa9.66□□□□□ -0.86
LRCH3-215ENST00000476664 SYMPKQ92797 1274 aaKnown RBP9.66□□□□□ -0.86
LRCH3-215ENST00000476664 CCSER2Q9H7U1 834 aa9.66□□□□□ -0.86
LRCH3-215ENST00000476664 ATP6V1AP38606 617 aa9.65□□□□□ -0.86
LRCH3-215ENST00000476664 ARHGAP4P98171 946 aa9.65□□□□□ -0.86
LRCH3-215ENST00000476664 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-215ENST00000476664 KCNH2Q12809 1159 aa9.65□□□□□ -0.86
LRCH3-215ENST00000476664 GNL2Q13823 731 aaKnown RBP9.65□□□□□ -0.86
LRCH3-215ENST00000476664 NT5DC4Q86YG4 428 aa9.65□□□□□ -0.86
LRCH3-215ENST00000476664 PHTF2Q8N3S3 785 aa9.65□□□□□ -0.86
LRCH3-215ENST00000476664 TMEM87AQ8NBN3 555 aa9.65□□□□□ -0.86
LRCH3-215ENST00000476664 PRIMPOLQ96LW4 560 aa9.65□□□□□ -0.86
LRCH3-215ENST00000476664 TINF2Q9BSI4 451 aa9.65□□□□□ -0.86
LRCH3-215ENST00000476664 TGIF2Q9GZN2 237 aa9.65□□□□□ -0.86
LRCH3-215ENST00000476664 MRS2Q9HD23 443 aa9.65□□□□□ -0.86
LRCH3-215ENST00000476664 METTL5Q9NRN9 209 aaKnown RBP9.65□□□□□ -0.86
LRCH3-215ENST00000476664 KIAA0556O60303 1618 aa9.64□□□□□ -0.87
LRCH3-215ENST00000476664 SMAPO00193 183 aa9.64□□□□□ -0.87
LRCH3-215ENST00000476664 FMNL1O95466 1100 aaPredicted RBP9.64□□□□□ -0.87
LRCH3-215ENST00000476664 ZNF662Q6ZS27 426 aa9.64□□□□□ -0.87
LRCH3-215ENST00000476664 CHIC2Q9UKJ5 165 aa9.64□□□□□ -0.87
LRCH3-215ENST00000476664 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
LRCH3-215ENST00000476664 ARHGEF12Q9NZN5 1544 aa9.64□□□□□ -0.87
LRCH3-215ENST00000476664 AKNAQ7Z591 1439 aa9.64□□□□□ -0.87
LRCH3-215ENST00000476664 DISP1Q96F81 1524 aa9.63□□□□□ -0.87
LRCH3-215ENST00000476664 RICTORQ6R327 1708 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms