RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 H3BM21 787 aa10.12□□□□□ -0.79
LTN1-204ENST00000475344 RNF135Q8IUD6 432 aa10.12□□□□□ -0.79
LTN1-204ENST00000475344 WWC1Q8IX03 1113 aa10.12□□□□□ -0.79
LTN1-204ENST00000475344 PTSQ03393 145 aa10.11□□□□□ -0.79
LTN1-204ENST00000475344 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
LTN1-204ENST00000475344 CYP2U1Q7Z449 544 aa10.11□□□□□ -0.79
LTN1-204ENST00000475344 NPAS3Q8IXF0 933 aa10.11□□□□□ -0.79
LTN1-204ENST00000475344 RNF217Q8TC41 542 aa10.11□□□□□ -0.79
LTN1-204ENST00000475344 IRF7Q92985 503 aa10.11□□□□□ -0.79
LTN1-204ENST00000475344 DOLKQ9UPQ8 538 aa10.11□□□□□ -0.79
LTN1-204ENST00000475344 MYCP01106 439 aaPredicted RBP10.1□□□□□ -0.79
LTN1-204ENST00000475344 TSGA10IPQ3SY00 556 aa10.1□□□□□ -0.79
LTN1-204ENST00000475344 OXLD1Q5BKU9 147 aa10.1□□□□□ -0.79
LTN1-204ENST00000475344 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
LTN1-204ENST00000475344 A0A1W2PRU2 124 aa10.09□□□□□ -0.79
LTN1-204ENST00000475344 PPFIA3O75145 1194 aa10.09□□□□□ -0.79
LTN1-204ENST00000475344 OSBPL3Q9H4L5 887 aa10.09□□□□□ -0.79
LTN1-204ENST00000475344 ARHGEF10LQ9HCE6 1279 aa10.09□□□□□ -0.79
LTN1-204ENST00000475344 RAB6BQ9NRW1 208 aa10.09□□□□□ -0.79
LTN1-204ENST00000475344 PRICKLE2Q7Z3G6 844 aa10.08□□□□□ -0.8
LTN1-204ENST00000475344 NLRP3Q96P20 1036 aa10.08□□□□□ -0.8
LTN1-204ENST00000475344 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
LTN1-204ENST00000475344 SOX11P35716 441 aa10.06□□□□□ -0.8
LTN1-204ENST00000475344 GMPRP36959 345 aa10.06□□□□□ -0.8
LTN1-204ENST00000475344 LYSMD3Q7Z3D4 306 aa10.06□□□□□ -0.8
LTN1-204ENST00000475344 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
LTN1-204ENST00000475344 TRAK2O60296 914 aa10.05□□□□□ -0.8
LTN1-204ENST00000475344 RHOQP17081 205 aa10.05□□□□□ -0.8
LTN1-204ENST00000475344 SLC27A3Q5K4L6 730 aa10.05□□□□□ -0.8
LTN1-204ENST00000475344 CCDC155Q8N6L0 562 aa10.05□□□□□ -0.8
LTN1-204ENST00000475344 RNF144AP50876 292 aaPredicted RBP10.04□□□□□ -0.8
LTN1-204ENST00000475344 USP4Q13107 963 aa10.04□□□□□ -0.8
LTN1-204ENST00000475344 CLUAP1Q96AJ1 413 aa10.04□□□□□ -0.8
LTN1-204ENST00000475344 PIK3CDO00329 1044 aa10.03□□□□□ -0.8
LTN1-204ENST00000475344 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
LTN1-204ENST00000475344 SLC35F4A4IF30 521 aa10.02□□□□□ -0.81
LTN1-204ENST00000475344 POM121CA8CG34 1229 aa10.02□□□□□ -0.81
LTN1-204ENST00000475344 GNRH1P01148 92 aa10.02□□□□□ -0.81
LTN1-204ENST00000475344 CLN3Q13286 438 aa10.02□□□□□ -0.81
LTN1-204ENST00000475344 CDC14CA4D256 554 aa10.01□□□□□ -0.81
LTN1-204ENST00000475344 WIPF1O43516 503 aa10.01□□□□□ -0.81
LTN1-204ENST00000475344 STAU1O95793 577 aaKnown RBP10.01□□□□□ -0.81
LTN1-204ENST00000475344 CNKSR1Q969H4 720 aa10.01□□□□□ -0.81
LTN1-204ENST00000475344 SKIP12755 728 aa10□□□□□ -0.81
LTN1-204ENST00000475344 GPC1P35052 558 aa10□□□□□ -0.81
LTN1-204ENST00000475344 POU4F2Q12837 409 aa10□□□□□ -0.81
LTN1-204ENST00000475344 SIRT1Q96EB6 747 aa10□□□□□ -0.81
LTN1-204ENST00000475344 ALG2Q9H553 416 aa10□□□□□ -0.81
LTN1-204ENST00000475344 SENP3-EIF4A1A0A087X0R7 540 aa9.99□□□□□ -0.81
LTN1-204ENST00000475344 IL2RAP01589 272 aa9.99□□□□□ -0.81
LTN1-204ENST00000475344 ITGA6P23229 1130 aa9.99□□□□□ -0.81
LTN1-204ENST00000475344 MAP7D1Q3KQU3 841 aa9.99□□□□□ -0.81
LTN1-204ENST00000475344 INSM1Q01101 510 aaPredicted RBP9.98□□□□□ -0.81
LTN1-204ENST00000475344 ESYT1Q9BSJ8 1104 aa9.98□□□□□ -0.81
LTN1-204ENST00000475344 VSIG8P0DPA2 414 aa9.97□□□□□ -0.81
LTN1-204ENST00000475344 CENPCQ03188 943 aa9.97□□□□□ -0.81
LTN1-204ENST00000475344 ESCO1Q5FWF5 840 aa9.97□□□□□ -0.81
LTN1-204ENST00000475344 CHIC2Q9UKJ5 165 aa9.97□□□□□ -0.81
LTN1-204ENST00000475344 HDGFL1Q5TGJ6 251 aa9.96□□□□□ -0.82
LTN1-204ENST00000475344 PROSER2Q86WR7 435 aaPredicted RBP9.96□□□□□ -0.82
LTN1-204ENST00000475344 VWA5B2Q8N398 1253 aa9.96□□□□□ -0.82
LTN1-204ENST00000475344 GAS2L1Q99501 681 aaPredicted RBP9.96□□□□□ -0.82
LTN1-204ENST00000475344 GRIP2Q9C0E4 1043 aa9.96□□□□□ -0.82
LTN1-204ENST00000475344 ETNK1Q9HBU6 452 aa9.96□□□□□ -0.82
LTN1-204ENST00000475344 GTF2E1P29083 439 aaPredicted RBP9.95□□□□□ -0.82
LTN1-204ENST00000475344 PHKA2P46019 1235 aa9.95□□□□□ -0.82
LTN1-204ENST00000475344 EML3Q32P44 896 aa9.95□□□□□ -0.82
LTN1-204ENST00000475344 RIPOR1Q6ZS17 1223 aa9.95□□□□□ -0.82
LTN1-204ENST00000475344 DEPDC4Q8N2C3 294 aa9.95□□□□□ -0.82
LTN1-204ENST00000475344 GPR161Q8N6U8 529 aaKnown RBP9.95□□□□□ -0.82
LTN1-204ENST00000475344 ADAMTS19Q8TE59 1207 aa9.95□□□□□ -0.82
LTN1-204ENST00000475344 ZSCAN10Q96SZ4 725 aaPredicted RBP9.95□□□□□ -0.82
LTN1-204ENST00000475344 TMEM214Q6NUQ4 689 aaKnown RBP9.94□□□□□ -0.82
LTN1-204ENST00000475344 NBPF10Q6P3W6 841 aaKnown RBP9.94□□□□□ -0.82
LTN1-204ENST00000475344 SV2AQ7L0J3 742 aa9.94□□□□□ -0.82
LTN1-204ENST00000475344 TAS1R3Q7RTX0 852 aa9.94□□□□□ -0.82
LTN1-204ENST00000475344 NBPF15Q8N660 670 aa9.94□□□□□ -0.82
LTN1-204ENST00000475344 WASLO00401 505 aaPredicted RBP9.93□□□□□ -0.82
LTN1-204ENST00000475344 GDF10P55107 478 aa9.93□□□□□ -0.82
LTN1-204ENST00000475344 NCOA4Q13772 614 aa9.93□□□□□ -0.82
LTN1-204ENST00000475344 TLR1Q15399 786 aa9.93□□□□□ -0.82
LTN1-204ENST00000475344 XAGE2Q96GT9 111 aa9.93□□□□□ -0.82
LTN1-204ENST00000475344 CNTNAP3BQ96NU0 1288 aa9.92□□□□□ -0.82
LTN1-204ENST00000475344 CNTNAP3Q9BZ76 1288 aa9.92□□□□□ -0.82
LTN1-204ENST00000475344 TIMMDC1Q9NPL8 285 aa9.92□□□□□ -0.82
LTN1-204ENST00000475344 CUEDC1Q9NWM3 386 aaPredicted RBP9.92□□□□□ -0.82
LTN1-204ENST00000475344 USP17L5A8MUK1 530 aa9.91□□□□□ -0.82
LTN1-204ENST00000475344 PSME1Q06323 249 aa9.91□□□□□ -0.82
LTN1-204ENST00000475344 GNASQ5JWF2 1037 aa9.91□□□□□ -0.82
LTN1-204ENST00000475344 NANOS1Q8WY41 292 aaKnown RBP9.91□□□□□ -0.82
LTN1-204ENST00000475344 SERTAD1Q9UHV2 236 aa9.91□□□□□ -0.82
LTN1-204ENST00000475344 NOD1Q9Y239 953 aa9.91□□□□□ -0.82
LTN1-204ENST00000475344 SPATA31C2B4DYI2 1134 aa9.9□□□□□ -0.82
LTN1-204ENST00000475344 SCNN1DP51172 638 aa9.9□□□□□ -0.82
LTN1-204ENST00000475344 TBC1D9Q6ZT07 1266 aa9.9□□□□□ -0.82
LTN1-204ENST00000475344 ZSCAN1Q8NBB4 408 aa9.9□□□□□ -0.82
LTN1-204ENST00000475344 GLMNQ92990 594 aa9.9□□□□□ -0.82
LTN1-204ENST00000475344 COL25A1Q9BXS0 654 aaPredicted RBP9.9□□□□□ -0.82
LTN1-204ENST00000475344 DYRK1BQ9Y463 629 aa9.9□□□□□ -0.82
LTN1-204ENST00000475344 HRH3Q9Y5N1 445 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms