RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 LMOD3Q0VAK6 560 aa13.65□□□□□ -0.22
C9orf3-214ENST00000473778 FAM43AQ8N2R8 423 aa13.65□□□□□ -0.22
C9orf3-214ENST00000473778 API5Q9BZZ5 524 aaKnown RBP13.65□□□□□ -0.22
C9orf3-214ENST00000473778 RGPD1P0DJD0 1748 aa13.65□□□□□ -0.22
C9orf3-214ENST00000473778 OVOS2A0A0J9YW53 1432 aa13.64□□□□□ -0.23
C9orf3-214ENST00000473778 OVOS2Q6IE36 1432 aa13.64□□□□□ -0.23
C9orf3-214ENST00000473778 DCTPP1Q9H773 170 aa13.64□□□□□ -0.23
C9orf3-214ENST00000473778 TTC21BQ7Z4L5 1316 aa13.64□□□□□ -0.23
C9orf3-214ENST00000473778 ADAMTS13Q76LX8 1427 aa13.64□□□□□ -0.23
C9orf3-214ENST00000473778 TOPAZ1Q8N9V7 1692 aa13.64□□□□□ -0.23
C9orf3-214ENST00000473778 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
C9orf3-214ENST00000473778 MSH6P52701 1360 aa13.63□□□□□ -0.23
C9orf3-214ENST00000473778 UBR1Q8IWV7 1749 aa13.63□□□□□ -0.23
C9orf3-214ENST00000473778 ACEP12821 1306 aa13.63□□□□□ -0.23
C9orf3-214ENST00000473778 GOLGA6L3A6NEY3 463 aa13.63□□□□□ -0.23
C9orf3-214ENST00000473778 CHL1O00533 1208 aa13.63□□□□□ -0.23
C9orf3-214ENST00000473778 L1TD1Q5T7N2 865 aaKnown RBP13.63□□□□□ -0.23
C9orf3-214ENST00000473778 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.63□□□□□ -0.23
C9orf3-214ENST00000473778 NALCNQ8IZF0 1738 aa13.63□□□□□ -0.23
C9orf3-214ENST00000473778 SOX12O15370 315 aa13.63□□□□□ -0.23
C9orf3-214ENST00000473778 RAB3GAP1Q15042 981 aa13.63□□□□□ -0.23
C9orf3-214ENST00000473778 GAS2L2Q8NHY3 880 aa13.63□□□□□ -0.23
C9orf3-214ENST00000473778 CHMP4BQ9H444 224 aaKnown RBP13.63□□□□□ -0.23
C9orf3-214ENST00000473778 MIS18AQ9NYP9 233 aa13.63□□□□□ -0.23
C9orf3-214ENST00000473778 FOXO3O43524 673 aa13.62□□□□□ -0.23
C9orf3-214ENST00000473778 HSP90AB1P08238 724 aaKnown RBP13.62□□□□□ -0.23
C9orf3-214ENST00000473778 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
C9orf3-214ENST00000473778 TMEM2Q9UHN6 1383 aa13.61□□□□□ -0.23
C9orf3-214ENST00000473778 SMARCA5O60264 1052 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-214ENST00000473778 CEP85Q6P2H3 762 aa13.61□□□□□ -0.23
C9orf3-214ENST00000473778 MEIS3Q99687 375 aa13.61□□□□□ -0.23
C9orf3-214ENST00000473778 K7ELQ4 463 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-214ENST00000473778 CDC45O75419 566 aa13.61□□□□□ -0.23
C9orf3-214ENST00000473778 ANKRD44Q8N8A2 993 aa13.61□□□□□ -0.23
C9orf3-214ENST00000473778 CRB1P82279 1406 aa13.61□□□□□ -0.23
C9orf3-214ENST00000473778 RTL1A6NKG5 1358 aa13.6□□□□□ -0.23
C9orf3-214ENST00000473778 KIF24Q5T7B8 1368 aa13.6□□□□□ -0.23
C9orf3-214ENST00000473778 LTKP29376 864 aa13.6□□□□□ -0.23
C9orf3-214ENST00000473778 TTC22Q5TAA0 569 aa13.6□□□□□ -0.23
C9orf3-214ENST00000473778 USP6P35125 1406 aa13.6□□□□□ -0.23
C9orf3-214ENST00000473778 APBB1O00213 710 aa13.6□□□□□ -0.23
C9orf3-214ENST00000473778 DDX11L8A8MPP1 907 aa13.59□□□□□ -0.23
C9orf3-214ENST00000473778 GAS2L3Q86XJ1 694 aa13.59□□□□□ -0.23
C9orf3-214ENST00000473778 MAP3K19Q56UN5 1328 aa13.59□□□□□ -0.23
C9orf3-214ENST00000473778 TNRQ92752 1358 aa13.59□□□□□ -0.23
C9orf3-214ENST00000473778 PTPRUQ92729 1446 aa13.59□□□□□ -0.23
C9orf3-214ENST00000473778 G2E3Q7L622 706 aa13.59□□□□□ -0.23
C9orf3-214ENST00000473778 SSFA2P28290 1259 aa13.58□□□□□ -0.24
C9orf3-214ENST00000473778 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-214ENST00000473778 KIAA0232Q92628 1395 aa13.58□□□□□ -0.24
C9orf3-214ENST00000473778 SSH2Q76I76 1423 aa13.58□□□□□ -0.24
C9orf3-214ENST00000473778 KIF13AQ9H1H9 1805 aa13.58□□□□□ -0.24
C9orf3-214ENST00000473778 ZMYND15Q9H091 742 aa13.58□□□□□ -0.24
C9orf3-214ENST00000473778 USP31Q70CQ4 1352 aa13.58□□□□□ -0.24
C9orf3-214ENST00000473778 FMN2Q9NZ56 1722 aa13.57□□□□□ -0.24
C9orf3-214ENST00000473778 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-214ENST00000473778 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
C9orf3-214ENST00000473778 F6X3S4 739 aa13.57□□□□□ -0.24
C9orf3-214ENST00000473778 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
C9orf3-214ENST00000473778 SDSP20132 328 aa13.57□□□□□ -0.24
C9orf3-214ENST00000473778 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
C9orf3-214ENST00000473778 MTHFSDQ2M296 383 aaKnown RBP13.57□□□□□ -0.24
C9orf3-214ENST00000473778 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
C9orf3-214ENST00000473778 SLC26A8Q96RN1 970 aa13.56□□□□□ -0.24
C9orf3-214ENST00000473778 CEP170BQ9Y4F5 1589 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-214ENST00000473778 HSP90AA1P07900 732 aaKnown RBP13.56□□□□□ -0.24
C9orf3-214ENST00000473778 RPAP2Q8IXW5 612 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-214ENST00000473778 GRPEL1Q9HAV7 217 aa13.56□□□□□ -0.24
C9orf3-214ENST00000473778 PKP1Q13835 747 aa13.55□□□□□ -0.24
C9orf3-214ENST00000473778 ESF1Q9H501 851 aaKnown RBP13.55□□□□□ -0.24
C9orf3-214ENST00000473778 PTPRCP08575 1304 aa13.54□□□□□ -0.24
C9orf3-214ENST00000473778 MRE11P49959 708 aa13.54□□□□□ -0.24
C9orf3-214ENST00000473778 HDGFP51858 240 aaKnown RBP13.53□□□□□ -0.24
C9orf3-214ENST00000473778 TSHZ3Q63HK5 1081 aa13.53□□□□□ -0.24
C9orf3-214ENST00000473778 SLC4A10Q6U841 1118 aa13.53□□□□□ -0.24
C9orf3-214ENST00000473778 GBP4Q96PP9 640 aa13.53□□□□□ -0.24
C9orf3-214ENST00000473778 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
C9orf3-214ENST00000473778 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.24
C9orf3-214ENST00000473778 CEBPAP49715 358 aaPredicted RBP13.52□□□□□ -0.24
C9orf3-214ENST00000473778 ARHGEF10O15013 1369 aa13.52□□□□□ -0.25
C9orf3-214ENST00000473778 KDRP35968 1356 aa13.52□□□□□ -0.25
C9orf3-214ENST00000473778 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.25
C9orf3-214ENST00000473778 PIK3C2AO00443 1686 aa13.52□□□□□ -0.25
C9orf3-214ENST00000473778 EYA1Q99502 592 aa13.52□□□□□ -0.25
C9orf3-214ENST00000473778 ERBB4Q15303 1308 aa13.51□□□□□ -0.25
C9orf3-214ENST00000473778 RABEP1Q15276 862 aa13.51□□□□□ -0.25
C9orf3-214ENST00000473778 CLEC17AQ6ZS10 378 aa13.51□□□□□ -0.25
C9orf3-214ENST00000473778 TSPYL4Q9UJ04 414 aa13.51□□□□□ -0.25
C9orf3-214ENST00000473778 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
C9orf3-214ENST00000473778 ZGPATQ8N5A5 531 aaKnown RBP13.51□□□□□ -0.25
C9orf3-214ENST00000473778 EXOC6BQ9Y2D4 811 aa13.5□□□□□ -0.25
C9orf3-214ENST00000473778 FAM208AQ9UK61 1670 aaKnown RBP13.5□□□□□ -0.25
C9orf3-214ENST00000473778 CYP2E1P05181 493 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-214ENST00000473778 CHAMP1Q96JM3 812 aa13.5□□□□□ -0.25
C9orf3-214ENST00000473778 FLT4P35916 1363 aa13.5□□□□□ -0.25
C9orf3-214ENST00000473778 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
C9orf3-214ENST00000473778 IGSF1Q8N6C5 1336 aa13.49□□□□□ -0.25
C9orf3-214ENST00000473778 LRRC37A3O60309 1634 aa13.49□□□□□ -0.25
C9orf3-214ENST00000473778 XRN1Q8IZH2 1706 aaKnown RBP13.49□□□□□ -0.25
C9orf3-214ENST00000473778 PDE1AP54750 535 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 290.7 ms