RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 IRX2Q9BZI1 471 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-214ENST00000473177 SETD1AO15047 1707 aaKnown RBP7.09□□□□□ -1.27
LRCH3-214ENST00000473177 POLR1AO95602 1720 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-214ENST00000473177 EEA1Q15075 1411 aa7.09□□□□□ -1.28
LRCH3-214ENST00000473177 TNRQ92752 1358 aa7.08□□□□□ -1.28
LRCH3-214ENST00000473177 SYNMO15061 1565 aa7.08□□□□□ -1.28
LRCH3-214ENST00000473177 LRRC7Q96NW7 1537 aa7.08□□□□□ -1.28
LRCH3-214ENST00000473177 ZPR1O75312 459 aa7.08□□□□□ -1.28
LRCH3-214ENST00000473177 AP1G2O75843 785 aa7.08□□□□□ -1.28
LRCH3-214ENST00000473177 HELBQ8NG08 1087 aaPredicted RBP7.08□□□□□ -1.28
LRCH3-214ENST00000473177 PRR7Q8TB68 274 aa7.08□□□□□ -1.28
LRCH3-214ENST00000473177 IL21Q9HBE4 155 aa7.08□□□□□ -1.28
LRCH3-214ENST00000473177 ZNF777Q9ULD5 760 aaPredicted RBP7.08□□□□□ -1.28
LRCH3-214ENST00000473177 FAM135AQ9P2D6 1515 aa7.07□□□□□ -1.28
LRCH3-214ENST00000473177 A2MP01023 1474 aa7.07□□□□□ -1.28
LRCH3-214ENST00000473177 ITGBL1O95965 494 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-214ENST00000473177 USP17L8P0C7I0 530 aa7.07□□□□□ -1.28
LRCH3-214ENST00000473177 TRIM52Q96A61 297 aa7.07□□□□□ -1.28
LRCH3-214ENST00000473177 KIDINS220Q9ULH0 1771 aa7.07□□□□□ -1.28
LRCH3-214ENST00000473177 ITSN2Q9NZM3 1697 aa7.06□□□□□ -1.28
LRCH3-214ENST00000473177 CTDSPL2Q05D32 466 aa7.06□□□□□ -1.28
LRCH3-214ENST00000473177 MSS51Q4VC12 460 aa7.06□□□□□ -1.28
LRCH3-214ENST00000473177 MEX3CQ5U5Q3 659 aaKnown RBP7.06□□□□□ -1.28
LRCH3-214ENST00000473177 SPSB2Q99619 263 aa7.06□□□□□ -1.28
LRCH3-214ENST00000473177 SNRKQ9NRH2 765 aa7.06□□□□□ -1.28
LRCH3-214ENST00000473177 FMN1Q68DA7 1419 aa7.06□□□□□ -1.28
LRCH3-214ENST00000473177 SAMD9LQ8IVG5 1584 aa7.06□□□□□ -1.28
LRCH3-214ENST00000473177 PREX2Q70Z35 1606 aa7.05□□□□□ -1.28
LRCH3-214ENST00000473177 MTMR14Q8NCE2 650 aa7.05□□□□□ -1.28
LRCH3-214ENST00000473177 ZNF516Q92618 1163 aa7.05□□□□□ -1.28
LRCH3-214ENST00000473177 ATP7AQ04656 1500 aa7.05□□□□□ -1.28
LRCH3-214ENST00000473177 MED14O60244 1454 aa7.04□□□□□ -1.28
LRCH3-214ENST00000473177 UGGT1Q9NYU2 1555 aa7.04□□□□□ -1.28
LRCH3-214ENST00000473177 FAM135BQ49AJ0 1406 aa7.04□□□□□ -1.28
LRCH3-214ENST00000473177 ADH1BP00325 375 aa7.04□□□□□ -1.28
LRCH3-214ENST00000473177 LYPD8Q6UX82 237 aa7.04□□□□□ -1.28
LRCH3-214ENST00000473177 FAM160A2Q8N612 972 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-214ENST00000473177 TSC1Q92574 1164 aa7.04□□□□□ -1.28
LRCH3-214ENST00000473177 SYCP2Q9BX26 1530 aa7.04□□□□□ -1.28
LRCH3-214ENST00000473177 PLXNC1O60486 1568 aa7.03□□□□□ -1.28
LRCH3-214ENST00000473177 DEPDC5O75140 1603 aa7.03□□□□□ -1.28
LRCH3-214ENST00000473177 APBB1O00213 710 aa7.03□□□□□ -1.28
LRCH3-214ENST00000473177 TLL1O43897 1013 aa7.03□□□□□ -1.28
LRCH3-214ENST00000473177 UBTFP17480 764 aaKnown RBP7.03□□□□□ -1.28
LRCH3-214ENST00000473177 JUNDP17535 347 aa7.03□□□□□ -1.28
LRCH3-214ENST00000473177 MMP16P51512 607 aa7.03□□□□□ -1.28
LRCH3-214ENST00000473177 HNRNPMP52272 730 aaKnown RBP eCLIP7.03□□□□□ -1.28
LRCH3-214ENST00000473177 NEUROD1Q13562 356 aa7.03□□□□□ -1.28
LRCH3-214ENST00000473177 ZNF772Q68DY9 489 aaPredicted RBP7.03□□□□□ -1.28
LRCH3-214ENST00000473177 ZMYND15Q9H091 742 aa7.03□□□□□ -1.28
LRCH3-214ENST00000473177 NLRP1Q9C000 1473 aa7.03□□□□□ -1.28
LRCH3-214ENST00000473177 IQGAP1P46940 1657 aa7.03□□□□□ -1.28
LRCH3-214ENST00000473177 CDC42BPBQ9Y5S2 1711 aa7.02□□□□□ -1.29
LRCH3-214ENST00000473177 PER1O15534 1290 aaPredicted RBP7.02□□□□□ -1.29
LRCH3-214ENST00000473177 DXOO77932 396 aaKnown RBP7.02□□□□□ -1.29
LRCH3-214ENST00000473177 KCNC4Q03721 635 aa7.02□□□□□ -1.29
LRCH3-214ENST00000473177 LRRN4Q8WUT4 740 aa7.02□□□□□ -1.29
LRCH3-214ENST00000473177 GJD4Q96KN9 370 aaPredicted RBP7.02□□□□□ -1.29
LRCH3-214ENST00000473177 PZPP20742 1482 aa7.02□□□□□ -1.29
LRCH3-214ENST00000473177 JCADQ9P266 1359 aa7.01□□□□□ -1.29
LRCH3-214ENST00000473177 A6NJR5 290 aa7.01□□□□□ -1.29
LRCH3-214ENST00000473177 RXRBP28702 533 aa7.01□□□□□ -1.29
LRCH3-214ENST00000473177 PTPRNQ16849 979 aa7.01□□□□□ -1.29
LRCH3-214ENST00000473177 HMX1Q9NP08 348 aaPredicted RBP7.01□□□□□ -1.29
LRCH3-214ENST00000473177 KDM5DQ9BY66 1539 aa7.01□□□□□ -1.29
LRCH3-214ENST00000473177 MIA2Q96PC5 1412 aa7.01□□□□□ -1.29
LRCH3-214ENST00000473177 WASHC2CQ9Y4E1 1318 aa7.01□□□□□ -1.29
LRCH3-214ENST00000473177 INO80Q9ULG1 1556 aaPredicted RBP7□□□□□ -1.29
LRCH3-214ENST00000473177 LRRC9Q6ZRR7 1453 aa7□□□□□ -1.29
LRCH3-214ENST00000473177 TRIM34Q9BYJ4 488 aa7□□□□□ -1.29
LRCH3-214ENST00000473177 SLC6A16Q9GZN6 736 aa7□□□□□ -1.29
LRCH3-214ENST00000473177 PRDM9Q9NQV7 894 aa7□□□□□ -1.29
LRCH3-214ENST00000473177 PLEKHH2Q8IVE3 1493 aa6.99□□□□□ -1.29
LRCH3-214ENST00000473177 KIF3BO15066 747 aa6.99□□□□□ -1.29
LRCH3-214ENST00000473177 RAD21O60216 631 aa6.99□□□□□ -1.29
LRCH3-214ENST00000473177 NKX2-3Q8TAU0 364 aa6.99□□□□□ -1.29
LRCH3-214ENST00000473177 PRM3Q9NNZ6 103 aa6.99□□□□□ -1.29
LRCH3-214ENST00000473177 COG6Q9Y2V7 657 aa6.99□□□□□ -1.29
LRCH3-214ENST00000473177 ROBO1Q9Y6N7 1651 aa6.98□□□□□ -1.29
LRCH3-214ENST00000473177 F12P00748 615 aaPredicted RBP6.98□□□□□ -1.29
LRCH3-214ENST00000473177 CLUAP1Q96AJ1 413 aa6.98□□□□□ -1.29
LRCH3-214ENST00000473177 POM121Q96HA1 1249 aa6.98□□□□□ -1.29
LRCH3-214ENST00000473177 CFDP1Q9UEE9 299 aaPredicted RBP6.98□□□□□ -1.29
LRCH3-214ENST00000473177 NDUFB9Q9Y6M9 179 aa6.98□□□□□ -1.29
LRCH3-214ENST00000473177 SPATA31A6Q5VVP1 1343 aa6.98□□□□□ -1.29
LRCH3-214ENST00000473177 CCDC18Q5T9S5 1454 aa6.98□□□□□ -1.29
LRCH3-214ENST00000473177 SCAF11Q99590 1463 aaKnown RBP6.98□□□□□ -1.29
LRCH3-214ENST00000473177 STRCP1A6NGW2 1772 aa6.97□□□□□ -1.29
LRCH3-214ENST00000473177 TMEM94Q12767 1356 aa6.97□□□□□ -1.29
LRCH3-214ENST00000473177 CCNYL3P0C7X3 344 aa6.97□□□□□ -1.29
LRCH3-214ENST00000473177 NUDT12Q9BQG2 462 aa6.97□□□□□ -1.29
LRCH3-214ENST00000473177 GDPD2Q9HCC8 539 aa6.97□□□□□ -1.29
LRCH3-214ENST00000473177 EVA1BQ9NVM1 165 aa6.97□□□□□ -1.29
LRCH3-214ENST00000473177 KIAA1107Q9UPP5 1409 aa6.97□□□□□ -1.29
LRCH3-214ENST00000473177 EID1Q9Y6B2 187 aa6.97□□□□□ -1.29
LRCH3-214ENST00000473177 ADGBQ8N7X0 1667 aa6.96□□□□□ -1.29
LRCH3-214ENST00000473177 S1PR4O95977 384 aa6.96□□□□□ -1.3
LRCH3-214ENST00000473177 NR6A1Q15406 480 aa6.96□□□□□ -1.3
LRCH3-214ENST00000473177 PROSER2Q86WR7 435 aaPredicted RBP6.96□□□□□ -1.3
LRCH3-214ENST00000473177 FNBP4Q8N3X1 1017 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms